Duranta leaf curl virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_003029245.1
Isolate Pakistan: Bhera
Release date 2018/8/26
Submitter Anwar,S., Tahir,M.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038980
ACCGGATGGCCGCGATTTTTTTGTCCCCTCGTGGGTCCCACCAAGTGGTCCATGGACAAATGGCCCAATCAAAAGCACTTCTGAAAGCTTTATTGATGTGTGGGCCCCATATATAATGACTTGCTGAGTAAGTTTGTTGTAAACATGTGGGACCCACTATTGAATGAGTTCCCAGAAACTGTTCATGGGTTTAGGTGTATGCTAGCAATTAAATACTTGCAGCTAGTAGAAAATACGTATTCCCCAGATACTCTGGGATACGATTTAATTAGGGATTTGATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCCTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATATGCGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAAGGCAAGGGCATGGGCGAACAGGCCCATGAACAGAAAGCCCAGGATATACAGGATGTACAGAAGCCCAGATGTTCCGAGGGGATGTGAAGGCCCATGCAAGGTCCAGTCATTTGAGTCCAGACATGATATCCAGCACATTGGTAAAGTCATGTGTGTTAGTGATGTTACTCGTGGTATTGGACTGACCCACAGGGTTGGCAAGAGGTTCTGTGTGAAGTCCGTTTATGTTCTGGGCAAGATCTGGATGGATGAGAACATCAAGACTAAGAATCATACGAATAGTGTTATGTTTTTCCTTGTACGTGATAGGCGTCCTGTTGACAAGCCTCAAGATTTTGGTGATGTGTTCAACATGTTTGATAATGAGCCCAGCACGGCGACTGTGAAGAATGTGCATCGTGATAGGTACCAGGTGCTTAGGAAGTGGCATGCAACGGTTACAGGCGGTCTGTATGCATCGAAGGAGCAGGCTCTCGTGAAGAAGTTTATTAGGGTTAATAATTATGTTGTGTACAACCAGCAAGAGGCTGGGAAATATGAGAATCATACTGAGAATGCATTGATGTTGTATATGGCGTGTACCCACGCCTCTAACCCTGTGTATGCTACACTGAAGATACGGATCTACTTCTATGATTCAGTATCGAATTAATAAATTTTAAATTTTATATCATGATCCTCAATTACATCAATTGTGTCATGGAGTACATCATATAGTACATGTTTAAATGCCCTAATACAATTATTTATACTAAGCACTCCTAATCTATCTAAATATCTTAAAACTTGAGTCTTAAAGACTCTTAAGAAATGCCCAGTCTGAGGATGTAAACGAGTGTGGATCCTCAAGCCCAAGAAACACTTCATTATCCCCAGTTCCTTCCTGATGTTGTGATTGAACTGGACCCTGATGTGGATGATGTCGTGGTTCATGTTGAGTGGCCTTTGGTCGTGGTCTGAGATCTTGAAATAAAGGGGATTTGGGACTTCCCAGATATACACGCCATTCATTGCTTGAGCTGCAGTGATGGATTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATGTGTACGTAGTATGAGCAGCCACACTCGAGGTCAACCCTCTTACGCCGGATGGCTCTACGCTTGGCTAGCCTGTGTTGGACCTTGATTGGTACCTGAGTACAGTGGCTCTGTGAGGGTGATGAATTCTGCATTCTTTATAGCCCACGACTTCAGTGCTGAGTTCTTTTCCTCCTCTAAGAACTCTTTATAGCTGGAGTTGGGCCCAGGATTGCATAGGAAGATAGTGGGAATACCACCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAACTCTTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGATGTTGTACCATGCATCATTTGAATAGATTTTAGGGCTCAGATCTAAATGGCCACATAAATAATTATGTGGACCCAGTGACCTAGCCCACATCGTCTTCCCCGTTCTACTATCACCCTCTATGACGATACTTTTAGGTCTCAAAGGCCGCGCAGCGGCACCCACCACATTTTCAGAGGCCCATTCCTCTATGGCCTCTGGGACTTGATCAAACGAAGAAGAAAGAAAAGGGGAAACATAAACCTCCATTGGAGGTGCAAAAATCCTATCTAAATTATTTTTTAAATTATGATATTGAAAAATAAAATCTTTAGGGAGTTTCTCCCTAATTATTGCTAAAGCTGCTTCAGCTGAACCTGCATTTAGCGCCTTTGCTGCAACATCATTAGCTGTCTGTTGACCTCCTCTAGCAGATCTTCCATCGATCTGAAACTGACCCCAGTCGATGTAATCACCGTCCTTCTCGATGTAGGACTTGACATCGGATGAGGACTTAGCTCCCTGGAAGTTTGGGTGGAATTGTGTGGATGTATTAGGGTGAGTGACATCGAAATGTCTGGGGTTTCTGAACTGGGATTTACCCTTGAACTGGATGAGGGCATGGATATGCAGAGACCCATCTTGGTGTTTTTCCTGTGACACTCTGATAAATAATTTATCAGAAGGACAAGAAATATTTTTAAGGAGTTCGAGCATTTGCTCTTTGGGTATTGGGCATTTTGGATAAGTGAGGAAGATATTTTTGGCTTTAACTTGGAACTGATGAGTACGAGGCATATTGAATTGGGTGCTCTCTAAAACTCTGAGGAATGGGGATCTTTGGGTGCCTATTTATATGGAGCACCCAAATGGCCTTTTCGTAATTTTGACATAAAATTCAAAATTCAAATTTCAAATCCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009508378.1
Location 145-510
Protein Name V2
Coding Region ATGTGGGACCCACTATTGAATGAGTTCCCAGAAACTGTTCATGGGTTTAGGTGTATGCTAGCAATTAAATACTTGCAGCTAGTAGAAAATACGTATTCCCCAGATACTCTGGGATACGATTTAATTAGGGATTTGATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCCTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATATGCGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAAGGCAAGGGCATGGGCGAACAGGCCCATGAACAGAAAGCCCAGGATATACAGGATGTACAGAAGCCCAGATGTTCCGAGGGGATGTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLISVIRARNYVEATSRYNHFHARLEGTPPSQLRQPICEPCCCPHCPRHKGKGMGEQAHEQKAQDIQDVQKPRCSEGM

NCBI Accession YP_009508379.1
Location 305-1075
Protein Name coat protein
Coding Region ATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCCTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATATGCGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAAGGCAAGGGCATGGGCGAACAGGCCCATGAACAGAAAGCCCAGGATATACAGGATGTACAGAAGCCCAGATGTTCCGAGGGGATGTGAAGGCCCATGCAAGGTCCAGTCATTTGAGTCCAGACATGATATCCAGCACATTGGTAAAGTCATGTGTGTTAGTGATGTTACTCGTGGTATTGGACTGACCCACAGGGTTGGCAAGAGGTTCTGTGTGAAGTCCGTTTATGTTCTGGGCAAGATCTGGATGGATGAGAACATCAAGACTAAGAATCATACGAATAGTGTTATGTTTTTCCTTGTACGTGATAGGCGTCCTGTTGACAAGCCTCAAGATTTTGGTGATGTGTTCAACATGTTTGATAATGAGCCCAGCACGGCGACTGTGAAGAATGTGCATCGTGATAGGTACCAGGTGCTTAGGAAGTGGCATGCAACGGTTACAGGCGGTCTGTATGCATCGAAGGAGCAGGCTCTCGTGAAGAAGTTTATTAGGGTTAATAATTATGTTGTGTACAACCAGCAAGAGGCTGGGAAATATGAGAATCATACTGAGAATGCATTGATGTTGTATATGGCGTGTACCCACGCCTCTAACCCTGTGTATGCTACACTGAAGATACGGATCTACTTCTATGATTCAGTATCGAATTAA
Protein Sequence MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKARAWANRPMNRKPRIYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGIGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGDVFNMFDNEPSTATVKNVHRDRYQVLRKWHATVTGGLYASKEQALVKKFIRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession YP_009508380.1
Location 1072-1476
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAATCCATCACTGCAGCTCAAGCAATGAATGGCGTGTATATCTGGGAAGTCCCAAATCCCCTTTATTTCAAGATCTCAGACCACGACCAAAGGCCACTCAACATGAACCACGACATCATCCACATCAGGGTCCAGTTCAATCACAACATCAGGAAGGAACTGGGGATAATGAAGTGTTTCTTGGGCTTGAGGATCCACACTCGTTTACATCCTCAGACTGGGCATTTCTTAAGAGTCTTTAAGACTCAAGTTTTAAGATATTTAGATAGATTAGGAGTGCTTAGTATAAATAATTGTATTAGGGCATTTAAACATGTACTATATGATGTACTCCATGACACAATTGATGTAATTGAGGATCATGATATAAAATTTAAAATTTATTAA
Protein Sequence MDSRTGESITAAQAMNGVYIWEVPNPLYFKISDHDQRPLNMNHDIIHIRVQFNHNIRKELGIMKCFLGLRIHTRLHPQTGHFLRVFKTQVLRYLDRLGVLSINNCIRAFKHVLYDVLHDTIDVIEDHDIKFKIY

NCBI Accession YP_009508381.1
Location 1217-1624
Protein Name transcriptional activator protein
Coding Region ATGCAGAATTCATCACCCTCACAGAGCCACTGTACTCAGGTACCAATCAAGGTCCAACACAGGCTAGCCAAGCGTAGAGCCATCCGGCGTAAGAGGGTTGACCTCGAGTGTGGCTGCTCATACTACGTACACATCAACTGCCACAACCATGGATTCACGCACAGGGGAATCCATCACTGCAGCTCAAGCAATGAATGGCGTGTATATCTGGGAAGTCCCAAATCCCCTTTATTTCAAGATCTCAGACCACGACCAAAGGCCACTCAACATGAACCACGACATCATCCACATCAGGGTCCAGTTCAATCACAACATCAGGAAGGAACTGGGGATAATGAAGTGTTTCTTGGGCTTGAGGATCCACACTCGTTTACATCCTCAGACTGGGCATTTCTTAAGAGTCTTTAA
Protein Sequence MQNSSPSQSHCTQVPIKVQHRLAKRRAIRRKRVDLECGCSYYVHINCHNHGFTHRGIHHCSSSNEWRVYLGSPKSPLFQDLRPRPKATQHEPRHHPHQGPVQSQHQEGTGDNEVFLGLEDPHSFTSSDWAFLKSL

NCBI Accession YP_009508382.1
Location 1548-2612
Protein Name replication associated protein
Coding Region ATGCCTCGTACTCATCAGTTCCAAGTTAAAGCCAAAAATATCTTCCTCACTTATCCAAAATGCCCAATACCCAAAGAGCAAATGCTCGAACTCCTTAAAAATATTTCTTGTCCTTCTGATAAATTATTTATCAGAGTGTCACAGGAAAAACACCAAGATGGGTCTCTGCATATCCATGCCCTCATCCAGTTCAAGGGTAAATCCCAGTTCAGAAACCCCAGACATTTCGATGTCACTCACCCTAATACATCCACACAATTCCACCCAAACTTCCAGGGAGCTAAGTCCTCATCCGATGTCAAGTCCTACATCGAGAAGGACGGTGATTACATCGACTGGGGTCAGTTTCAGATCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGTTGCAGCAAAGGCGCTAAATGCAGGTTCAGCTGAAGCAGCTTTAGCAATAATTAGGGAGAAACTCCCTAAAGATTTTATTTTTCAATATCATAATTTAAAAAATAATTTAGATAGGATTTTTGCACCTCCAATGGAGGTTTATGTTTCCCCTTTTCTTTCTTCTTCGTTTGATCAAGTCCCAGAGGCCATAGAGGAATGGGCCTCTGAAAATGTGGTGGGTGCCGCTGCGCGGCCTTTGAGACCTAAAAGTATCGTCATAGAGGGTGATAGTAGAACGGGGAAGACGATGTGGGCTAGGTCACTGGGTCCACATAATTATTTATGTGGCCATTTAGATCTGAGCCCTAAAATCTATTCAAATGATGCATGGTACAACATCATTGATGACGTAGACCCCCACTATCTAAAGCACTTTAAAGAGTTCATGGGGGCCCAGAGGGACTGGCAAAGCAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGTGGTATTCCCACTATCTTCCTATGCAATCCTGGGCCCAACTCCAGCTATAAAGAGTTCTTAGAGGAGGAAAAGAACTCAGCACTGAAGTCGTGGGCTATAAAGAATGCAGAATTCATCACCCTCACAGAGCCACTGTACTCAGGTACCAATCAAGGTCCAACACAGGCTAGCCAAGCGTAG
Protein Sequence MPRTHQFQVKAKNIFLTYPKCPIPKEQMLELLKNISCPSDKLFIRVSQEKHQDGSLHIHALIQFKGKSQFRNPRHFDVTHPNTSTQFHPNFQGAKSSSDVKSYIEKDGDYIDWGQFQIDGRSARGGQQTANDVAAKALNAGSAEAALAIIREKLPKDFIFQYHNLKNNLDRIFAPPMEVYVSPFLSSSFDQVPEAIEEWASENVVGAAARPLRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNIIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLEEEKNSALKSWAIKNAEFITLTEPLYSGTNQGPTQASQA

NCBI Accession YP_009508383.1
Location 2198-2455
Protein Name C4
Coding Region ATGGGTCTCTGCATATCCATGCCCTCATCCAGTTCAAGGGTAAATCCCAGTTCAGAAACCCCAGACATTTCGATGTCACTCACCCTAATACATCCACACAATTCCACCCAAACTTCCAGGGAGCTAAGTCCTCATCCGATGTCAAGTCCTACATCGAGAAGGACGGTGATTACATCGACTGGGGTCAGTTTCAGATCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGTTGCAGCAAAGGCGCTAA
Protein Sequence MGLCISMPSSSSRVNPSSETPDISMSLTLIHPHNSTQTSRELSPHPMSSPTSRRTVITSTGVSFRSMEDLLEEVNRQLMMLQQRR