Dicliptera yellow mottle virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000840105.1 |
Isolate |
USA:Florida |
Release date |
2015/2/12 |
Submitter |
Lotrakul,P., Valverde,R.A., Landry,A.D. |
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TAATATTACCGGATGGCCGCGCCCCCCCCTCCCCTTTGCCGTACACTCTTGTGGTCCCCCCTCACTTTAATTTGAATTAAATGTCTGTGGACCAATCATATTGCATGTGCAGAGTCTAGATATTTGTGTTACTACTTGCTGATTAAGTTTAGTGGGCCTATAAAATTCAAATTAAAGCCCATTCATTTTAATTCAAAATGTCTAAGAGGGATGCCCCATGGCGTATGATGGTGGGCCCCTCTAAGGTTAGGCGTACTCTCAATTTCTCCCCTGGTGGAGGAATGGGCTCAAAGTCCAATAGGGCCTCTAGTTGGGTTAACAGGCCCATGTATAGGAAGCCCAGAATATATCGTATGTACAGGACTCCTGATGTGCCCAAAGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTATGAGCAGCGTCATGATATTTCACATGTTGGTAAGGTGATGTGTGTTTCTGATGTGACACGTGGTAATGGCATTACCCACCGTGTGGGGAAACGTTTTTGTGTCAAGTCTGTGTACATTCTAGGGAAGATATGGATGGATGAGAACATCAAGCTCAAGAACCACACTAATAGTGTCATGTTTTGGTTGGTTCGAGACAGGAGACCATATGGCACTCCTATGGATTTTGGCCAAGTATTCAACATGTTTGATAATGAGCCCAGTACTGCTACTGTGAAGAACGATCTACGTGATCGTTATCAAGTCATGCATAAGTTTTATGCTAAGGTGACTGGTGGACAGTATGCAAGTAATGAACAGGCTTTGGTGAAGCGTTTTTGGAAGATCAACAACCATGTAGTGTACAACCATCAAGAAGCTGGGAAATATGAGAATCACACAGAGAATGCTCTGTTATTGTATATGGCATGTACTCATGCTTCTAATCCTGTGTATGCTACTTTGAAAATTCGGATCTATTTTTATGATTCGATTATGAATTAATAAAATTTGAATTTTATTTCATGATTTTCTAATACATCTGTTACATAAGACTTGTCTGTTGCATAATGAACAGCTCCAAGTACATTGTTAATTGATACAACACCTATGTTATTTAAATATGACATTACAAGGAATTTGAATCTACTTAAATATATCATCCCAGAAGCTGTCAGAGAAGTCGTCCAGACTTGGAAGTTGAAGTAGGCTTTGTGAAGATTCAATTTCTTCCGAAGGTTGTAATTGAACCTTATCTGAAGGTGATACACCCTGCTGCGTGTGTACATTGGATCCTCTACTTGGAGTATCTTGAAATAGAGGGGATTTGGAACTTCCCAAATAAAAACGCCACTCGTTGCTTGAACTGCAGTGATGGGTTCCTCTGTGCGTGAATCCATGATTAGCACAGTTAATGTGGATGTATATTGAACAGCCACAGTTGAGGTCAACTCGTCGTCGCCTGATTGCTCTCTTCTTAGCTCTCTTGTGAATTGGTTTGATAGAGGGCGCCTGTGAGGGTGATGAAGATGGCATTATGTATTGTCCAGTTTTGTAATGCCTGATTTTCTTGTTTATTAAGGAAATCTTTATAGCTGGAGCCCTCACCAGGATTGCATAGCACGATTGATGGAATGCCCCCTTTAATTTGAACTGGCTTTCCATACTTACAGTTTGACTGCCAGTCTTTCTGGGCCCCAATTAATTCTTTCCAATGCTTTAATTTCAAATAGCTAGGGCTGACATCATCAATGACGTTATATTCTACGTCATTCGAATAGACCCTAGAATTGAAATCCAGATGACCTGACAGATAATTATGCTTTCCTAATGATCTTGCCCACATTGTCTTGCCGGTTCTTGAATCACCTTCGACGATGATACTAATAGGTCTCTCTGGCCGCGCAGCGGCACTCATGCCAAAATAATTGTCTGCCCATTCCTGCATCTCTTCTGGTACGTTAGTGAAAGAAGACAGTTGAAACGGAGGGACCCACGGTTCTGGAGCCTTCATGAATATGCGTTCCAAATTTGCCCTTAGATTATGTTGTTGTGTAACATAATCTTTTAGCTGTTCTTCTTTCAAAATTTGAAGAGCTTGTTCTGCAGATGAGGCATTTAATGCCCTGGCGTAAGAGTCATTAGCTGTCTGGCAGCCTCCTCTAGCACTTCTACCGTCAACCTGGTATTGTCCCCACTCCAGTGTGTCTCCATCCTTGCTGACGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGATCGAAGAATCTGTTACTTGTGCAGTTGTATTTCCCTTCGAATTGTATAAGCACATGGAGATGAGGCTGCCCATCTTCGTGTAATTCTCTGGCAATTTTAATGAATTTCTTATTTGTGGGTGTCTTCAAGTTGATGAGTTGCTGTAATGCTTCTTCTTTTGATAGTGAGCACTGAGGATATGTGAGAAAATAATTTTTGGCTTTAATGGAGAAGACACCCTTCCTTGGCATTGTTCCCCCAGAAGTGTTCCCCCAATTTCCTCTGGCTCCAAAACTCTATACAATTGGGAGAACTGGGGGAAAATATATACTAGAAGTCTAAGTAAGGAGATTGCAACACGTGGCGGCCATCCAATA
Gene Information
NCBI Accession
|
NP_620849.1
|
Location
|
198-953 |
Gene Name
|
AV1 |
Protein Name
|
coat protein AV1 |
Coding Region
|
ATGTCTAAGAGGGATGCCCCATGGCGTATGATGGTGGGCCCCTCTAAGGTTAGGCGTACTCTCAATTTCTCCCCTGGTGGAGGAATGGGCTCAAAGTCCAATAGGGCCTCTAGTTGGGTTAACAGGCCCATGTATAGGAAGCCCAGAATATATCGTATGTACAGGACTCCTGATGTGCCCAAAGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTATGAGCAGCGTCATGATATTTCACATGTTGGTAAGGTGATGTGTGTTTCTGATGTGACACGTGGTAATGGCATTACCCACCGTGTGGGGAAACGTTTTTGTGTCAAGTCTGTGTACATTCTAGGGAAGATATGGATGGATGAGAACATCAAGCTCAAGAACCACACTAATAGTGTCATGTTTTGGTTGGTTCGAGACAGGAGACCATATGGCACTCCTATGGATTTTGGCCAAGTATTCAACATGTTTGATAATGAGCCCAGTACTGCTACTGTGAAGAACGATCTACGTGATCGTTATCAAGTCATGCATAAGTTTTATGCTAAGGTGACTGGTGGACAGTATGCAAGTAATGAACAGGCTTTGGTGAAGCGTTTTTGGAAGATCAACAACCATGTAGTGTACAACCATCAAGAAGCTGGGAAATATGAGAATCACACAGAGAATGCTCTGTTATTGTATATGGCATGTACTCATGCTTCTAATCCTGTGTATGCTACTTTGAAAATTCGGATCTATTTTTATGATTCGATTATGAATTAA |
Protein Sequence
|
MSKRDAPWRMMVGPSKVRRTLNFSPGGGMGSKSNRASSWVNRPMYRKPRIYRMYRTPDVPKGCEGPCKVQSYEQRHDISHVGKVMCVSDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKINNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
NCBI Accession
|
NP_620850.1
|
Location
|
950-1348 |
Gene Name
|
AC3 |
Protein Name
|
AC3 |
Coding Region
|
ATGGATTCACGCACAGAGGAACCCATCACTGCAGTTCAAGCAACGAGTGGCGTTTTTATTTGGGAAGTTCCAAATCCCCTCTATTTCAAGATACTCCAAGTAGAGGATCCAATGTACACACGCAGCAGGGTGTATCACCTTCAGATAAGGTTCAATTACAACCTTCGGAAGAAATTGAATCTTCACAAAGCCTACTTCAACTTCCAAGTCTGGACGACTTCTCTGACAGCTTCTGGGATGATATATTTAAGTAGATTCAAATTCCTTGTAATGTCATATTTAAATAACATAGGTGTTGTATCAATTAACAATGTACTTGGAGCTGTTCATTATGCAACAGACAAGTCTTATGTAACAGATGTATTAGAAAATCATGAAATAAAATTCAAATTTTATTAA |
Protein Sequence
|
MDSRTEEPITAVQATSGVFIWEVPNPLYFKILQVEDPMYTRSRVYHLQIRFNYNLRKKLNLHKAYFNFQVWTTSLTASGMIYLSRFKFLVMSYLNNIGVVSINNVLGAVHYATDKSYVTDVLENHEIKFKFY |
NCBI Accession
|
NP_620851.1
|
Location
|
1095-1613 |
Gene Name
|
AC2 |
Protein Name
|
AC2 |
Coding Region
|
ATGGAAAGCCAGTTCAAATTAAAGGGGGCATTCCATCAATCGTGCTATGCAATCCTGGTGAGGGCTCCAGCTATAAAGATTTCCTTAATAAACAAGAAAATCAGGCATTACAAAACTGGACAATACATAATGCCATCTTCATCACCCTCACAGGCGCCCTCTATCAAACCAATTCACAAGAGAGCTAAGAAGAGAGCAATCAGGCGACGACGAGTTGACCTCAACTGTGGCTGTTCAATATACATCCACATTAACTGTGCTAATCATGGATTCACGCACAGAGGAACCCATCACTGCAGTTCAAGCAACGAGTGGCGTTTTTATTTGGGAAGTTCCAAATCCCCTCTATTTCAAGATACTCCAAGTAGAGGATCCAATGTACACACGCAGCAGGGTGTATCACCTTCAGATAAGGTTCAATTACAACCTTCGGAAGAAATTGAATCTTCACAAAGCCTACTTCAACTTCCAAGTCTGGACGACTTCTCTGACAGCTTCTGGGATGATATATTTAAGTAG |
Protein Sequence
|
MESQFKLKGAFHQSCYAILVRAPAIKISLINKKIRHYKTGQYIMPSSSPSQAPSIKPIHKRAKKRAIRRRRVDLNCGCSIYIHINCANHGFTHRGTHHCSSSNEWRFYLGSSKSPLFQDTPSRGSNVHTQQGVSPSDKVQLQPSEEIESSQSLLQLPSLDDFSDSFWDDIFK |
NCBI Accession
|
NP_620852.1
|
Location
|
1426-2481 |
Gene Name
|
AC1 |
Protein Name
|
replication initiation protein AC1 |
Coding Region
|
ATGCCAAGGAAGGGTGTCTTCTCCATTAAAGCCAAAAATTATTTTCTCACATATCCTCAGTGCTCACTATCAAAAGAAGAAGCATTACAGCAACTCATCAACTTGAAGACACCCACAAATAAGAAATTCATTAAAATTGCCAGAGAATTACACGAAGATGGGCAGCCTCATCTCCATGTGCTTATACAATTCGAAGGGAAATACAACTGCACAAGTAACAGATTCTTCGATCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACGTCAGCAAGGATGGAGACACACTGGAGTGGGGACAATACCAGGTTGACGGTAGAAGTGCTAGAGGAGGCTGCCAGACAGCTAATGACTCTTACGCCAGGGCATTAAATGCCTCATCTGCAGAACAAGCTCTTCAAATTTTGAAAGAAGAACAGCTAAAAGATTATGTTACACAACAACATAATCTAAGGGCAAATTTGGAACGCATATTCATGAAGGCTCCAGAACCGTGGGTCCCTCCGTTTCAACTGTCTTCTTTCACTAACGTACCAGAAGAGATGCAGGAATGGGCAGACAATTATTTTGGCATGAGTGCCGCTGCGCGGCCAGAGAGACCTATTAGTATCATCGTCGAAGGTGATTCAAGAACCGGCAAGACAATGTGGGCAAGATCATTAGGAAAGCATAATTATCTGTCAGGTCATCTGGATTTCAATTCTAGGGTCTATTCGAATGACGTAGAATATAACGTCATTGATGATGTCAGCCCTAGCTATTTGAAATTAAAGCATTGGAAAGAATTAATTGGGGCCCAGAAAGACTGGCAGTCAAACTGTAAGTATGGAAAGCCAGTTCAAATTAAAGGGGGCATTCCATCAATCGTGCTATGCAATCCTGGTGAGGGCTCCAGCTATAAAGATTTCCTTAATAAACAAGAAAATCAGGCATTACAAAACTGGACAATACATAATGCCATCTTCATCACCCTCACAGGCGCCCTCTATCAAACCAATTCACAAGAGAGCTAA |
Protein Sequence
|
MPRKGVFSIKAKNYFLTYPQCSLSKEEALQQLINLKTPTNKKFIKIARELHEDGQPHLHVLIQFEGKYNCTSNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYVSKDGDTLEWGQYQVDGRSARGGCQTANDSYARALNASSAEQALQILKEEQLKDYVTQQHNLRANLERIFMKAPEPWVPPFQLSSFTNVPEEMQEWADNYFGMSAAARPERPISIIVEGDSRTGKTMWARSLGKHNYLSGHLDFNSRVYSNDVEYNVIDDVSPSYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLNKQENQALQNWTIHNAIFITLTGALYQTNSQES |