Croton yellow vein mosaic virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000857305.1
Isolate India
Release date 2015/2/13
Submitter Mandal,B., Pappu,H.R., Muniyappa,V.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_004300
ACCGGATGGCCGCGAAAAAAAAAAGTGGGCCCCATGGCGCACTAACTGACAAATACATCTCCACCAATGAAAAGAGCTCCTCAGAGCTTAATTGTTTTGTGGTCCCCTATTTAAACTTCGCCACCAAGTAGTGCATTGCGCACTATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGGTTTAGATGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATGCTCCTGACACATTGGGGCACGATTTAATTAGGGATTTAATTTCAGTAATTAGGGCCAGAAATTATGTCGAAGCGTCCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGTCGTCTCAACTTCGACAGCCCATATGTGAACCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAGGCATGGGCGAACAGACCTATGTACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTGCAGTCTTTTGATGCGAAGAATGATATTGGTCACATGGGTAAGGTTATTTGTCTTTCTGATGTTACTAGGGGTATTGGGCTGACCCATCGAGTAGGGAAACGTTTCTGTGTGAAGTCATTGTATTTTGTTGGCAAAATATGGATGGACGAGAACATCAAGACCAAGAACCATACGAATACTGTTATGTTTTGGATCGTTAGAGATAGGCGTCCTTCAGGAACCCCAAATGATTTCCAGCAAGTGTTCAATGTTTATGATAATGAGCCCTCTACGGCTACTGTGAAGAACGACCAGCGTGATCGTTTTCAGGTGTTGAGGAGGTTTCAAGCAACAGTCACAGGTGGTCAATATGCTGCTAAGGAACAAGCTATAATTAGGAAATTCTATCGTGTCAACAATTATGTGGTGTATAATCACCAGGAAGCTGGGAAGTATGAAAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACAAATTAACATTAATAAAGATTGAATTTTATTGAATATGATTGGTCTACATATACAACGTGATGTAATACATTCCATAATACATGATCAACTGATTTAAGTACAGTGTTAATACTGATAACTCCTAAGTTATTTAAATACTTAAGAACTTGGGTCTTAAATACCCTTAAGAAACGACCAGTCGGAGGCTGTGAGGTCATCCAGATTCGGAAGGCTAGGAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGAACTGTATCTGAACGGTGATGATGTCTTCCTTCATTAGGAATGGCCTGTTGTGGTGTTGTGTTATCTTGAAATACAGGGGATTTTGAATCTCCCAGATAAACACGCCATTCTCTGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGGCTATGGATATGAAGTATGAACACCCACACGGTAGATCAACTCGTCGACGCCTGATCCCCTTCTTGGCTATCTTGTGCTGCACTTTGATTGGAACCTGAGTAGAGTGGGCCTTCGAGGGTGATGAAGGTCGCATTCTTTAAAGCCCAATTCTTGAGTGCAGCATTTTTCTCTTCATCCAAGAACTCTTTATAACTTGAGTCAGGTCCTGGATTGCAGAGGAAGATTGTGGGAATTCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCTTTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTAGTGGGGGTCTACGTCATCAATTACGTTATACCAGGCATCATTACTGTAGACTTTTGGGCTAAGGTCTAGATGACCACACAGATAATTATGTGGTCCAAGTGATCTGGCCCACATCGTCTTCCCAGTTCTACTGTCACCCTCGATCACTATACTTATGGGCCTTATAGGCCGCGCAGCGGCACTGACGACGTTCTCGGCAGCCCACTCCTCAAGTTCTTCTGGAACTTGATCGAATGAAGAAGAAGAAAAAGGAGAAACATAAACCTCCATTGGAGGTGTAAAAATCCTATCTAAATTACATTTTAAATTATGATATTGAAAAATAAAATCTTTAGGGAGTTTTTCCCTAATTATTGCTAAAGCTGCTTCGGTTGAACCTGCATTTAAGGCCTCTGCTGCAGCATCATTAGCTGTCTGTTGACCTCCTCGTGCAGATCTTCCATCGATCTGAAACTCACCCCAGTCGATGTAATCACTGTCCTTCTCGATGTAGGACTTGACATCGGAGCTGGACTTAGCTCCCTGGAAGTTTGGATGGAATTGGGTGGAGCTATTAGGGTGAGTGACATCGAAATGTCTGGGGTTTCGGAACTTGGATTTACCTTTGAATTGGATGAGGGCATGGATATGCATAGACCCATCTTGGTGTTTCTCTTGGGCTACTCTGATAAATAATCTATTAGACGGACAGGAAATGTTTTTAAGGATTTCGAGCATTTGTTCTTTGGGTATTGGGCATTTGGGATAAGTAAGGAAGATATTTTTGGCATTAACACAAAAAGAGTTAATACGAGGCATATTGAATTGGGGACACTCAAAACTCTGAGGAATGGGGGACTCGGGGGACTCATTTATATGGTGTCCCTAAATGGCATTTCTGTAATTTGGTAAAGTAATTCAAAATTCTCACGCTCCAAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession NP_694928.1
Location 145-501
Gene Name AV2
Protein Name pre-coat protein
Coding Region ATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGGTTTAGATGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATGCTCCTGACACATTGGGGCACGATTTAATTAGGGATTTAATTTCAGTAATTAGGGCCAGAAATTATGTCGAAGCGTCCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGTCGTCTCAACTTCGACAGCCCATATGTGAACCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAGGCATGGGCGAACAGACCTATGTACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTCCCTAA
Protein Sequence MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYAPDTLGHDLIRDLISVIRARNYVEASSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKGMGEQTYVQEAQDVQDVQKPRCP

NCBI Accession NP_694929.1
Location 290-613
Gene Name AC5
Protein Name AC5 protein
Coding Region ATGGGTCAGCCCAATACCCCTAGTAACATCAGAAAGACAAATAACCTTACCCATGTGACCAATATCATTCTTCGCATCAAAAGACTGCACCTTACATGGGCCTTCACATCCCTTAGGGACATCTGGGCTTCTGTACATCCTGTACATCCTGGGCTTCCTGTACATAGGTCTGTTCGCCCATGCCTTTGCTTTGGTGACGCGGACAATGGGGGCAGCAGCACGGTTCACATATGGGCTGTCGAAGTTGAGACGACGGCGTACCTTCGAAGCGGGCGTGGAAATGATTATATCTGCTGGACGCTTCGACATAATTTCTGGCCCTAA
Protein Sequence MGQPNTPSNIRKTNNLTHVTNIILRIKRLHLTWAFTSLRDIWASVHPVHPGLPVHRSVRPCLCFGDADNGGSSTVHIWAVEVETTAYLRSGRGNDYICWTLRHNFWP

NCBI Accession NP_694930.1
Location 305-1075
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGTCGTCTCAACTTCGACAGCCCATATGTGAACCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAGGCATGGGCGAACAGACCTATGTACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTGCAGTCTTTTGATGCGAAGAATGATATTGGTCACATGGGTAAGGTTATTTGTCTTTCTGATGTTACTAGGGGTATTGGGCTGACCCATCGAGTAGGGAAACGTTTCTGTGTGAAGTCATTGTATTTTGTTGGCAAAATATGGATGGACGAGAACATCAAGACCAAGAACCATACGAATACTGTTATGTTTTGGATCGTTAGAGATAGGCGTCCTTCAGGAACCCCAAATGATTTCCAGCAAGTGTTCAATGTTTATGATAATGAGCCCTCTACGGCTACTGTGAAGAACGACCAGCGTGATCGTTTTCAGGTGTTGAGGAGGTTTCAAGCAACAGTCACAGGTGGTCAATATGCTGCTAAGGAACAAGCTATAATTAGGAAATTCTATCGTGTCAACAATTATGTGGTGTATAATCACCAGGAAGCTGGGAAGTATGAAAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACAAATTAA
Protein Sequence MSKRPADIIISTPASKVRRRLNFDSPYVNRAAAPIVRVTKAKAWANRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEPSTATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession NP_694931.1
Location 1078-1482
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACACAACACCACAACAGGCCATTCCTAATGAAGGAAGACATCATCACCGTTCAGATACAGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTCCTAGCCTTCCGAATCTGGATGACCTCACAGCCTCCGACTGGTCGTTTCTTAAGGGTATTTAAGACCCAAGTTCTTAAGTATTTAAATAACTTAGGAGTTATCAGTATTAACACTGTACTTAAATCAGTTGATCATGTATTATGGAATGTATTACATCACGTTGTATATGTAGACCAATCATATTCAATAAAATTCAATCTTTATTAA
Protein Sequence MDSRTGELITAAQAENGVFIWEIQNPLYFKITQHHNRPFLMKEDIITVQIQFNHNLRKALGIHKCFLAFRIWMTSQPPTGRFLRVFKTQVLKYLNNLGVISINTVLKSVDHVLWNVLHHVVYVDQSYSIKFNLY

NCBI Accession NP_694932.1
Location 1223-1627
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCGACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAAGATAGCCAAGAAGGGGATCAGGCGTCGACGAGTTGATCTACCGTGTGGGTGTTCATACTTCATATCCATAGCCTGCCACAACCATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACACAACACCACAACAGGCCATTCCTAATGAAGGAAGACATCATCACCGTTCAGATACAGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTCCTAGCCTTCCGAATCTGGATGACCTCACAGCCTCCGACTGGTCGTTTCTTAAGGGTATTTAA
Protein Sequence MRPSSPSKAHSTQVPIKVQHKIAKKGIRRRRVDLPCGCSYFISIACHNHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNTTPQQAIPNEGRHHHRSDTVQSQPEESVGDTQMFPSLPNLDDLTASDWSFLKGI

NCBI Accession NP_694933.1
Location 1530-2615
Gene Name AC1
Protein Name replication-associated protein
Coding Region ATGCCTCGTATTAACTCTTTTTGTGTTAATGCCAAAAATATCTTCCTTACTTATCCCAAATGCCCAATACCCAAAGAACAAATGCTCGAAATCCTTAAAAACATTTCCTGTCCGTCTAATAGATTATTTATCAGAGTAGCCCAAGAGAAACACCAAGATGGGTCTATGCATATCCATGCCCTCATCCAATTCAAAGGTAAATCCAAGTTCCGAAACCCCAGACATTTCGATGTCACTCACCCTAATAGCTCCACCCAATTCCATCCAAACTTCCAGGGAGCTAAGTCCAGCTCCGATGTCAAGTCCTACATCGAGAAGGACAGTGATTACATCGACTGGGGTGAGTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCTTAAATGCAGGTTCAACCGAAGCAGCTTTAGCAATAATTAGGGAAAAACTCCCTAAAGATTTTATTTTTCAATATCATAATTTAAAATGTAATTTAGATAGGATTTTTACACCTCCAATGGAGGTTTATGTTTCTCCTTTTTCTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAGGAGTGGGCTGCCGAGAACGTCGTCAGTGCCGCTGCGCGGCCTATAAGGCCCATAAGTATAGTGATCGAGGGTGACAGTAGAACTGGGAAGACGATGTGGGCCAGATCACTTGGACCACATAATTATCTGTGTGGTCATCTAGACCTTAGCCCAAAAGTCTACAGTAATGATGCCTGGTATAACGTAATTGATGACGTAGACCCCCACTACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAAGGACTGGCAATCAAATACAAAATACGGGAAGCCAGTTCAAATTAAAGGCGGAATTCCCACAATCTTCCTCTGCAATCCAGGACCTGACTCAAGTTATAAAGAGTTCTTGGATGAAGAGAAAAATGCTGCACTCAAGAATTGGGCTTTAAAGAATGCGACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAAGATAGCCAAGAAGGGGATCAGGCGTCGACGAGTTGA
Protein Sequence MPRINSFCVNAKNIFLTYPKCPIPKEQMLEILKNISCPSNRLFIRVAQEKHQDGSMHIHALIQFKGKSKFRNPRHFDVTHPNSSTQFHPNFQGAKSSSDVKSYIEKDSDYIDWGEFQIDGRSARGGQQTANDAAAEALNAGSTEAALAIIREKLPKDFIFQYHNLKCNLDRIFTPPMEVYVSPFSSSSFDQVPEELEEWAAENVVSAAARPIRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQKDWQSNTKYGKPVQIKGGIPTIFLCNPGPDSSYKEFLDEEKNAALKNWALKNATFITLEGPLYSGSNQSAAQDSQEGDQASTS

NCBI Accession NP_694934.1
Location 2201-2458
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGTCTATGCATATCCATGCCCTCATCCAATTCAAAGGTAAATCCAAGTTCCGAAACCCCAGACATTTCGATGTCACTCACCCTAATAGCTCCACCCAATTCCATCCAAACTTCCAGGGAGCTAAGTCCAGCTCCGATGTCAAGTCCTACATCGAGAAGGACAGTGATTACATCGACTGGGGTGAGTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCTTAA
Protein Sequence MGLCISMPSSNSKVNPSSETPDISMSLTLIAPPNSIQTSRELSPAPMSSPTSRRTVITSTGVSFRSMEDLHEEVNRQLMMLQQRP