Crassocephalum yellow vein virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000869725.1
Isolate China
Release date 2015/2/13
Submitter Dong,J.H., Zhang,Z.K., Ding,M., Fang,Q., Zhou,H.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_008794
ACCGGATGGCCGCGATTTTTTTATAAAGTGGTCCCCACCACTAACAAATGTCCCCCAATTAGAACGCTTCCTCAAAGCTTAATTATTAAATGGTCCCCTATAAATACTTGGTCCCTACGTATTCACGTTAAAGAAATGTGGGATCCTCTTTTGAACGAGTTTCCCGAAACCGTTCACGGCTTTAGGTGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGATTAAATCGCCTGACACATTAGGGCACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGCACGCCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCCAGATCATGGGCGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGCCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTCCAATCTTTTGATGCTAAGAACGATATTGGTCACATGGGTAAGGTCCTATGTTTGTCCGACGTTACGAGGGGAAATGGTTTGACTCATCGGGTTGGTAAACGTTTTTGTGTCAAGTCTCTGTATTTTGTCGGTAAGATCTGGATGGACGAGAACATCAAGGTTAAGAACCACACTAACACCGTTTTGTTCTGGATCGTCCGGGACCGGCGACCCAGTGGTACCCCCAATGATTTTCAACAGGTCTTTAATGTGTATGATAATGAACCGTCTACTGCGACTGTTAAGGATGATCAGCGTGACCGCTATCAAGTCTTGCGAAGATTTCAATCAACGGTGACTGGTGGACGGTATGCTGCTAAGGAACAGGCGATAATTAGAGGATTTTATCGTGTAAATAATTATGTAGTGTACAATCACCAGGAAGCTGGGAAGTACGAGAACCATACTGAAAATGCTTTGTTGTTGTATATGGCATGTACCCATGCCTCTAATCCTGTGTATGCCACTTTGAAAGTCAGGAGTTATTTTTATGACTCAGTGACTAATTAATAAAGATTAAATTTTATTGAATAAGATTGGTCTACATATACAATGTGTTCTAATACATTCCATAATACATGATCAACCGTACGTATTACATTATTCAAACTAATTACACCCAAATTATTAAGAAACTTCAAAACTTGTGTCCTAAATACTCTTAAGAAACGACCAGTCTGAGGCTGTGAAGTCATCCAGATTCGGTAGACTAGAAAACACTTGTGTATCCCCAACGCTTTCCGCAGGTTGTAGTTGAACTGTATTTGGATGGTGATTATGTCTTCTTTCATGAGAAATGGACGGTTCTGGTGATTTATTATCTTGAAATAAAGGGGATTTTTGACCGTCCAGATATATACGCCACTCTCTGCTTGAGCTGCAGTGATAGCTTCCCCTGTGCGTGAATCCATGATCGTGACAGCCCAGTGCAATGAAGTATGAACAGCCACAAGGGAGATCAACTCGACGTCGTCTGGTTGCCTTCTTGGCGTTGCGGTGTTGCACCTTGATAGGAACCGGAGTAGAGTGGGCCTTGGAGGGTGACGAAGATCGCATTCTTTATTGCCCAATTTTTAAGTGCGTTGTTCTTTTCTTCATCCAGGAATTCTTTATAGCTGGAAGTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTTCCGTATTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGTTTTAGGTAGTGCGGATCTACGTCATCAATGACGTTGAACCAGGCATCATTGCTGTACACTTTAGGGCTCAGATCTAGATGTCCACACAAATAATTGTGTGGTCCTAATGACCTGGCCCACATGGTCTTCCCCGTCCTGCTATCACCCTCTATGACTATACTTACCGGTCTCAATGGCCGCGCAGCGGAACTGACGACATTGTCGGCAGCCCATTCATCAAGTTCTTCTGGAACTTGGTCAAAAGAAGAAGAAGAAAATGGAGAAATATATTCCTCTAATGGAGGAGTAAAAATCCTATCTAAATTACTATTTAAATTATGAAATTGTAAAACAAAATCTTTAGGGGCCTTTTCCCTCAATATATTGAGGGCCGATGTTTTGGACCCCGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCCGATCGTCCATCGATCTGGAAAATTCCATGATCAAGCACGTCTCCGTCTTTTTCCATGTATGATTTAACATCTGTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGTTTGGGGATATGAGATCGAAGAATCTTTGATTTTTACACTGGAATTTCCCTTCGAACTGGATGAGGATATGCAGGTGAGGAGTCCCATCTTCGTGTAGTTCTCTGCAGATTCTGATGAATAATTTAGTAATTGGGGTTTCTAGGGCTTTAATTTGGGAAAGTGCTTCCTCTTTGGTAAGAGAACAGTGTGGGTATGTGAGGAAATAGTTTTTGGCATTTATTCTGAATTTATTAGGAGGAGCCATTGACTGGTCAATTGGTGTCTCTCAAACTTGGCTACGCAATTGGTGTCTGGGGTCTTATTTATATGTGGACACCAAATGGCATAATTGTAAATTCTAAAGTTATATTCAAAATTCAAAATCTAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_001004146.1
Location 136-492
Gene Name AV2
Protein Name pre-coat protein
Coding Region ATGTGGGATCCTCTTTTGAACGAGTTTCCCGAAACCGTTCACGGCTTTAGGTGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGATTAAATCGCCTGACACATTAGGGCACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGCACGCCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCCAGATCATGGGCGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGCCCAGATGTCCCTAG
Protein Sequence MWDPLLNEFPETVHGFRCMLAVKYLQLVEKIKSPDTLGHDLIRDLISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSQIMGEQAHEQKAQDVQDVQKPRCP

NCBI Accession YP_001004147.1
Location 296-1066
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGCACGCCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCCAGATCATGGGCGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGCCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTCCAATCTTTTGATGCTAAGAACGATATTGGTCACATGGGTAAGGTCCTATGTTTGTCCGACGTTACGAGGGGAAATGGTTTGACTCATCGGGTTGGTAAACGTTTTTGTGTCAAGTCTCTGTATTTTGTCGGTAAGATCTGGATGGACGAGAACATCAAGGTTAAGAACCACACTAACACCGTTTTGTTCTGGATCGTCCGGGACCGGCGACCCAGTGGTACCCCCAATGATTTTCAACAGGTCTTTAATGTGTATGATAATGAACCGTCTACTGCGACTGTTAAGGATGATCAGCGTGACCGCTATCAAGTCTTGCGAAGATTTCAATCAACGGTGACTGGTGGACGGTATGCTGCTAAGGAACAGGCGATAATTAGAGGATTTTATCGTGTAAATAATTATGTAGTGTACAATCACCAGGAAGCTGGGAAGTACGAGAACCATACTGAAAATGCTTTGTTGTTGTATATGGCATGTACCCATGCCTCTAATCCTGTGTATGCCACTTTGAAAGTCAGGAGTTATTTTTATGACTCAGTGACTAATTAA
Protein Sequence MSKRPADIIISTPASKARRRLNFDSPYVSRAAAPIVRVTKARSWANRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVLCLSDVTRGNGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPSGTPNDFQQVFNVYDNEPSTATVKDDQRDRYQVLRRFQSTVTGGRYAAKEQAIIRGFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession YP_001004148.1
Location 1063-1467
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCACGCACAGGGGAAGCTATCACTGCAGCTCAAGCAGAGAGTGGCGTATATATCTGGACGGTCAAAAATCCCCTTTATTTCAAGATAATAAATCACCAGAACCGTCCATTTCTCATGAAAGAAGACATAATCACCATCCAAATACAGTTCAACTACAACCTGCGGAAAGCGTTGGGGATACACAAGTGTTTTCTAGTCTACCGAATCTGGATGACTTCACAGCCTCAGACTGGTCGTTTCTTAAGAGTATTTAGGACACAAGTTTTGAAGTTTCTTAATAATTTGGGTGTAATTAGTTTGAATAATGTAATACGTACGGTTGATCATGTATTATGGAATGTATTAGAACACATTGTATATGTAGACCAATCTTATTCAATAAAATTTAATCTTTATTAA
Protein Sequence MDSRTGEAITAAQAESGVYIWTVKNPLYFKIINHQNRPFLMKEDIITIQIQFNYNLRKALGIHKCFLVYRIWMTSQPQTGRFLRVFRTQVLKFLNNLGVISLNNVIRTVDHVLWNVLEHIVYVDQSYSIKFNLY

NCBI Accession YP_001004149.1
Location 1208-1612
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCGATCTTCGTCACCCTCCAAGGCCCACTCTACTCCGGTTCCTATCAAGGTGCAACACCGCAACGCCAAGAAGGCAACCAGACGACGTCGAGTTGATCTCCCTTGTGGCTGTTCATACTTCATTGCACTGGGCTGTCACGATCATGGATTCACGCACAGGGGAAGCTATCACTGCAGCTCAAGCAGAGAGTGGCGTATATATCTGGACGGTCAAAAATCCCCTTTATTTCAAGATAATAAATCACCAGAACCGTCCATTTCTCATGAAAGAAGACATAATCACCATCCAAATACAGTTCAACTACAACCTGCGGAAAGCGTTGGGGATACACAAGTGTTTTCTAGTCTACCGAATCTGGATGACTTCACAGCCTCAGACTGGTCGTTTCTTAAGAGTATTTAG
Protein Sequence MRSSSPSKAHSTPVPIKVQHRNAKKATRRRRVDLPCGCSYFIALGCHDHGFTHRGSYHCSSSREWRIYLDGQKSPLFQDNKSPEPSISHERRHNHHPNTVQLQPAESVGDTQVFSSLPNLDDFTASDWSFLKSI

NCBI Accession YP_001004150.1
Location 1515-2600
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGGCTCCTCCTAATAAATTCAGAATAAATGCCAAAAACTATTTCCTCACATACCCACACTGTTCTCTTACCAAAGAGGAAGCACTTTCCCAAATTAAAGCCCTAGAAACCCCAATTACTAAATTATTCATCAGAATCTGCAGAGAACTACACGAAGATGGGACTCCTCACCTGCATATCCTCATCCAGTTCGAAGGGAAATTCCAGTGTAAAAATCAAAGATTCTTCGATCTCATATCCCCAAACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTTAAATCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAATTTTCCAGATCGATGGACGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCGGGGTCCAAAACATCGGCCCTCAATATATTGAGGGAAAAGGCCCCTAAAGATTTTGTTTTACAATTTCATAATTTAAATAGTAATTTAGATAGGATTTTTACTCCTCCATTAGAGGAATATATTTCTCCATTTTCTTCTTCTTCTTTTGACCAAGTTCCAGAAGAACTTGATGAATGGGCTGCCGACAATGTCGTCAGTTCCGCTGCGCGGCCATTGAGACCGGTAAGTATAGTCATAGAGGGTGATAGCAGGACGGGGAAGACCATGTGGGCCAGGTCATTAGGACCACACAATTATTTGTGTGGACATCTAGATCTGAGCCCTAAAGTGTACAGCAATGATGCCTGGTTCAACGTCATTGATGACGTAGATCCGCACTACCTAAAACACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAATACGGAAAGCCAGTTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCCACTTCCAGCTATAAAGAATTCCTGGATGAAGAAAAGAACAACGCACTTAAAAATTGGGCAATAAAGAATGCGATCTTCGTCACCCTCCAAGGCCCACTCTACTCCGGTTCCTATCAAGGTGCAACACCGCAACGCCAAGAAGGCAACCAGACGACGTCGAGTTGA
Protein Sequence MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIKALETPITKLFIRICRELHEDGTPHLHILIQFEGKFQCKNQRFFDLISPNRSAHFHPNIQGAKSSTDVKSYMEKDGDVLDHGIFQIDGRSARGGCQSANDAYAEAINSGSKTSALNILREKAPKDFVLQFHNLNSNLDRIFTPPLEEYISPFSSSSFDQVPEELDEWAADNVVSSAARPLRPVSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKNNALKNWAIKNAIFVTLQGPLYSGSYQGATPQRQEGNQTTSS

NCBI Accession YP_001004151.1
Location 2150-2443
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGACTCCTCACCTGCATATCCTCATCCAGTTCGAAGGGAAATTCCAGTGTAAAAATCAAAGATTCTTCGATCTCATATCCCCAAACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTTAAATCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAATTTTCCAGATCGATGGACGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCGGGGTCCAAAACATCGGCCCTCAATATATTGA
Protein Sequence MGLLTCISSSSSKGNSSVKIKDSSISYPQTGQHISIRTFRELKAQQMLNHTWKKTETCLIMEFSRSMDDRLEEVANLPTTHMPRQSIRGPKHRPSIY