Clerodendrum golden mosaic Jiangsu virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002986365.1
Isolate China:Jiangsu province
Release date 2018/8/26
Submitter Li,J., Zhou,X., Zhou,X.P.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038876
ACCGGAAGGCCCGCGCCCCCCTTTTTTGTGGGCCCCGCGCACGTTCTTTTTGTCGTCCAATAGAATTGGGCCCTCAAAGCTTAGTTAAGTAATTTTGTCCTATTAATACGTGGTCTTCCTCTTTCCACGTATTAAGATGTGGGACCCACTCTTGAATGAGTTTCCCGAAACCGTACACGGTTTTAGGTGTATGCTCGCGATAAAATACTTGCAGCTCGTAGAAAATACGTATTCTCCGGATACGTTGGGGTACGATCTTATACGCGATCTTATACTTGTGATTCGTGCGAAGAATTATGTCGAAGCGTCCAGCAGATATAGTCATTTCCACGCCCGCCTCCAAGGTGCGTCGCCGTCTGAATTTCGACAGCCCTTATTCCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAGAAGGAGATCATGGGCTCAGCGGCCCATGTACCGGAAGCCCAAACTGTACAGAATGTACAGAAGCCCTGATGTTCCAAAGGGATGTGAAGGCCCATGTAAGGTTCAATCATTTGAACAGCGACATGATATAGCCCATACTGGGAAGGTTATTTGTATTTCCGATGTTACTAGGGGAGGTGGTATTACCCATAGGGTTGGTAAGAGATTTTGTGTTAAGTCCGTTTATGTCTTAGGTAAAGTGTGGATGGATGAAAATATTAAGGTTAAAAACCACACAAATACAGTTATGTTTTTTGTAGTTAGGGATCGACGTCCGTATGGTACTCCACAAGATTTTGGGCAGGTGTTTAATATGTATGATAATGAGCCCAGTACTGCTACCGTGAAGAACGATATGAGGGATCGTTTCCAAGTATTGAGGAAGTTTTCGTCGACTGTTACTGGTGGTCAATATGCGTCCAAGGAACAAGCTTTAGTGAGGAAGTTTATGAAGATAAATAATCATGTTACGTACAATCATCAGGAAGCCGCTAAGTATGAGAATCATACGGAGAATGCTGTTTTATTGTATATGGCATGTACTCATGCCTCTAATCCCGTGTATGCTACTTTGAAAATTCGGATCTATTTCTACGATTCGACAATGAATTAATAAAATATAAATTTTATATCATGTGCTTCAATTACATCAATTGTTCCCTCTATTACATTGGTTAATACATGGGTAAATGCCCTAATACAATTATTGATACTAATCACTCCTAATCTATCTAAATACTTAATTACTTGGGTTTTAAATACCCTTAAGAAATGCGATGTCTGAGGATGTAAAGCTGTGTAGATCTTCAAGTTGAGAAAACACTTGTGAATCCCCAACTCCTTCCTTAGGTTGTGGTTGAATCGGACTTGAATTTGTATGATGTCGTGGTTCATGTTGAACGGTCTCTTGTGGTGGTTTAGGATCTTGAAATAGAGGGGATTGTCTATAACCCATGTATGTACGCCATTCGTCGCTTGAGCTGCAGTGATGTACTCCCCTGTGCGTGAATCCATGGTGTTCGCAGTCCACTGATTTGTATATGGAACACCCGCAAGCTAGGTCAATTCTCTTCCTGCGAATTGGTCTCTTGGCCTGCTTGTGAATCACTTTGATTGGAGTATAATGGCTCCGTGAGGGTGACGAATGTTGCATTTTTTACTGCCCAGTCTCTTAAAGCTCTATTTTTCTCTTCATCCAAGAATTCTTTATATGATGAGTTTGGTCCTGGATTGCAGAGGAAGATAGTGGGAATACCACCTTTAATTTGAATTGGTTTCCCGTACTTTGTGTTTGACTGCCAGTCCCTCTGGGCTCCCATGAATTCCTTAAAGTGCTTTAGATAGTGGGGATCAACGTCATCAATGACGTTGTACCACGCGTCATTTGAATATACCTTGGGGCTCAAGTCTAGGTGTCCACACAAATAATTGTGTGGACCCAGAGACCTGGCCCACATAGTCTTGCCAGTACGACTATCCCCCTTTATCACAATACTATTCGGTCTCCATGGCCGCGCAGCGGCATTCCTAACATTCTCGGACACCCACTCCTCAAGTTCCTCAGGAACTTGGTTAAATGAAGAAGAAAGAAAAGGAGAAATATAAACCTCCAAGGGAGGTGCAAAAATCCTATCTAAATTACTATTTAAATTATGAAATTGAAAAATATAATCTTTTGGGAGTTTTTCCCTTATTATAGCCATGGCAGCCTCTTTGGAACCTGCGTTTAATGCTTCCGCACATGCGTCGTTAGCATTCTGGCAGCCTCCTCTAGCACTTCTGCCGTCGACTTGAAATTCTCCCCATTCGAGTGTATCTCCATCCTTGTCGATATAGGACTTGATGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTGTTATTTGTGCAGTTGTATTTTCCCTCGAATTGCACAAGCACATGGAGATGAGGGCTCCCATCTTCGTGTAATTCTTTGCAGATTTTAATGAATTTTTTATTTGTGGGAGTTTTTAGGTTTTGTAATTGGGAAAGTGCTTCCTCTTTGGTGAGAGAGCAGTGTGGATATGTTAGAAAATAGTTTTTGGCTTTAATAGAAAATCTACCTGCACGAGGCATTTTGGAATTGGGGGGCACTCAAAGTCTGAGGAATCGGGGGAACTGGGGGGCAATATATAGTGCCCCCCAAATGGCATAATGGTAATTTGGTAAAGATACTTTCTTTAATTCAAAATTCAAAATTCGAATAGTAGGCGGGCCTTCCTTCTAATATT

Gene Information

NCBI Accession YP_009508113.1
Location 137-487
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGACCCACTCTTGAATGAGTTTCCCGAAACCGTACACGGTTTTAGGTGTATGCTCGCGATAAAATACTTGCAGCTCGTAGAAAATACGTATTCTCCGGATACGTTGGGGTACGATCTTATACGCGATCTTATACTTGTGATTCGTGCGAAGAATTATGTCGAAGCGTCCAGCAGATATAGTCATTTCCACGCCCGCCTCCAAGGTGCGTCGCCGTCTGAATTTCGACAGCCCTTATTCCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAGAAGGAGATCATGGGCTCAGCGGCCCATGTACCGGAAGCCCAAACTGTACAGAATGTACAGAAGCCCTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRAKNYVEASSRYSHFHARLQGASPSEFRQPLFQPCCCPHCPRHKQKEIMGSAAHVPEAQTVQNVQKP

NCBI Accession YP_009508114.1
Location 297-1070
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCAGCAGATATAGTCATTTCCACGCCCGCCTCCAAGGTGCGTCGCCGTCTGAATTTCGACAGCCCTTATTCCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAGAAGGAGATCATGGGCTCAGCGGCCCATGTACCGGAAGCCCAAACTGTACAGAATGTACAGAAGCCCTGATGTTCCAAAGGGATGTGAAGGCCCATGTAAGGTTCAATCATTTGAACAGCGACATGATATAGCCCATACTGGGAAGGTTATTTGTATTTCCGATGTTACTAGGGGAGGTGGTATTACCCATAGGGTTGGTAAGAGATTTTGTGTTAAGTCCGTTTATGTCTTAGGTAAAGTGTGGATGGATGAAAATATTAAGGTTAAAAACCACACAAATACAGTTATGTTTTTTGTAGTTAGGGATCGACGTCCGTATGGTACTCCACAAGATTTTGGGCAGGTGTTTAATATGTATGATAATGAGCCCAGTACTGCTACCGTGAAGAACGATATGAGGGATCGTTTCCAAGTATTGAGGAAGTTTTCGTCGACTGTTACTGGTGGTCAATATGCGTCCAAGGAACAAGCTTTAGTGAGGAAGTTTATGAAGATAAATAATCATGTTACGTACAATCATCAGGAAGCCGCTAAGTATGAGAATCATACGGAGAATGCTGTTTTATTGTATATGGCATGTACTCATGCCTCTAATCCCGTGTATGCTACTTTGAAAATTCGGATCTATTTCTACGATTCGACAATGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYSSRAAAPTVLVTNRRRSWAQRPMYRKPKLYRMYRSPDVPKGCEGPCKVQSFEQRHDIAHTGKVICISDVTRGGGITHRVGKRFCVKSVYVLGKVWMDENIKVKNHTNTVMFFVVRDRRPYGTPQDFGQVFNMYDNEPSTATVKNDMRDRFQVLRKFSSTVTGGQYASKEQALVRKFMKINNHVTYNHQEAAKYENHTENAVLLYMACTHASNPVYATLKIRIYFYDSTMN

NCBI Accession YP_009508115.1
Location 1067-1471
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCACGCACAGGGGAGTACATCACTGCAGCTCAAGCGACGAATGGCGTACATACATGGGTTATAGACAATCCCCTCTATTTCAAGATCCTAAACCACCACAAGAGACCGTTCAACATGAACCACGACATCATACAAATTCAAGTCCGATTCAACCACAACCTAAGGAAGGAGTTGGGGATTCACAAGTGTTTTCTCAACTTGAAGATCTACACAGCTTTACATCCTCAGACATCGCATTTCTTAAGGGTATTTAAAACCCAAGTAATTAAGTATTTAGATAGATTAGGAGTGATTAGTATCAATAATTGTATTAGGGCATTTACCCATGTATTAACCAATGTAATAGAGGGAACAATTGATGTAATTGAAGCACATGATATAAAATTTATATTTTATTAA
Protein Sequence MDSRTGEYITAAQATNGVHTWVIDNPLYFKILNHHKRPFNMNHDIIQIQVRFNHNLRKELGIHKCFLNLKIYTALHPQTSHFLRVFKTQVIKYLDRLGVISINNCIRAFTHVLTNVIEGTIDVIEAHDIKFIFY

NCBI Accession YP_009508116.1
Location 1212-1610
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCAACATTCGTCACCCTCACGGAGCCATTATACTCCAATCAAAGTGATTCACAAGCAGGCCAAGAGACCAATTCGCAGGAAGAGAATTGACCTAGCTTGCGGGTGTTCCATATACAAATCAGTGGACTGCGAACACCATGGATTCACGCACAGGGGAGTACATCACTGCAGCTCAAGCGACGAATGGCGTACATACATGGGTTATAGACAATCCCCTCTATTTCAAGATCCTAAACCACCACAAGAGACCGTTCAACATGAACCACGACATCATACAAATTCAAGTCCGATTCAACCACAACCTAAGGAAGGAGTTGGGGATTCACAAGTGTTTTCTCAACTTGAAGATCTACACAGCTTTACATCCTCAGACATCGCATTTCTTAAGGGTATTTAA
Protein Sequence MQHSSPSRSHYTPIKVIHKQAKRPIRRKRIDLACGCSIYKSVDCEHHGFTHRGVHHCSSSDEWRTYMGYRQSPLFQDPKPPQETVQHEPRHHTNSSPIQPQPKEGVGDSQVFSQLEDLHSFTSSDIAFLKGI

NCBI Accession YP_009508117.1
Location 1519-2598
Gene Name AC1
Protein Name replication protein
Coding Region ATGCCTCGTGCAGGTAGATTTTCTATTAAAGCCAAAAACTATTTTCTAACATATCCACACTGCTCTCTCACCAAAGAGGAAGCACTTTCCCAATTACAAAACCTAAAAACTCCCACAAATAAAAAATTCATTAAAATCTGCAAAGAATTACACGAAGATGGGAGCCCTCATCTCCATGTGCTTGTGCAATTCGAGGGAAAATACAACTGCACAAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACATCAAGTCCTATATCGACAAGGATGGAGATACACTCGAATGGGGAGAATTTCAAGTCGACGGCAGAAGTGCTAGAGGAGGCTGCCAGAATGCTAACGACGCATGTGCGGAAGCATTAAACGCAGGTTCCAAAGAGGCTGCCATGGCTATAATAAGGGAAAAACTCCCAAAAGATTATATTTTTCAATTTCATAATTTAAATAGTAATTTAGATAGGATTTTTGCACCTCCCTTGGAGGTTTATATTTCTCCTTTTCTTTCTTCTTCATTTAACCAAGTTCCTGAGGAACTTGAGGAGTGGGTGTCCGAGAATGTTAGGAATGCCGCTGCGCGGCCATGGAGACCGAATAGTATTGTGATAAAGGGGGATAGTCGTACTGGCAAGACTATGTGGGCCAGGTCTCTGGGTCCACACAATTATTTGTGTGGACACCTAGACTTGAGCCCCAAGGTATATTCAAATGACGCGTGGTACAACGTCATTGATGACGTTGATCCCCACTATCTAAAGCACTTTAAGGAATTCATGGGAGCCCAGAGGGACTGGCAGTCAAACACAAAGTACGGGAAACCAATTCAAATTAAAGGTGGTATTCCCACTATCTTCCTCTGCAATCCAGGACCAAACTCATCATATAAAGAATTCTTGGATGAAGAGAAAAATAGAGCTTTAAGAGACTGGGCAGTAAAAAATGCAACATTCGTCACCCTCACGGAGCCATTATACTCCAATCAAAGTGATTCACAAGCAGGCCAAGAGACCAATTCGCAGGAAGAGAATTGA
Protein Sequence MPRAGRFSIKAKNYFLTYPHCSLTKEEALSQLQNLKTPTNKKFIKICKELHEDGSPHLHVLVQFEGKYNCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDIKSYIDKDGDTLEWGEFQVDGRSARGGCQNANDACAEALNAGSKEAAMAIIREKLPKDYIFQFHNLNSNLDRIFAPPLEVYISPFLSSSFNQVPEELEEWVSENVRNAAARPWRPNSIVIKGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEFLDEEKNRALRDWAVKNATFVTLTEPLYSNQSDSQAGQETNSQEEN

NCBI Accession YP_009508118.1
Location 2184-2441
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAGCCCTCATCTCCATGTGCTTGTGCAATTCGAGGGAAAATACAACTGCACAAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACATCAAGTCCTATATCGACAAGGATGGAGATACACTCGAATGGGGAGAATTTCAAGTCGACGGCAGAAGTGCTAGAGGAGGCTGCCAGAATGCTAACGACGCATGTGCGGAAGCATTAA
Protein Sequence MGALISMCLCNSRENTTAQITDSSTWYPQPGQHISIRTFRELNPAPTSSPISTRMEIHSNGENFKSTAEVLEEAARMLTTHVRKH