Cleome golden mosaic virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000893495.1 |
Isolate |
Brazil |
Release date |
2015/2/22 |
Submitter |
Fonseca,M.E.N., Boiteux,L.S., Fernandes,N.A.N., Costa,A.F. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATCAAAAAGTGGCCCCCCTCTCCGTAAATCGCGGCGCGTTGTCGGGTTCGTGGTCCCCCACGAGTATCTTGGACTTTGTATGGCCCAATAACAATTGGGCTTGAAAGCCAATATATGAAAATATACTTGGCCGCTAAGTTGATAAAGTTGTATATAAGGGGACCACATTCAATGTTCCCCGCATTCTGTTGTACAGAATGCCTAAGCGGGATGCCCCATGGCGCTTGTCGGCGGGTACCACCAAGGTTAGCCGCAATGCTAACTACTCCCCTGGTGGAGCTACGGGCCCTCGACCAAGCAGGGCCTCTGCTTGGGTTAACAGGCCCATGTATAGGAAGCCGCGTATTTACCGGATGTACCGATCACCCGATGTGCCCAAAGGGTGCGAAGGCCCATGCAAGGTCCAGTCATACGAGCAGCGTCACGATATATCCCACACCGGGAAGGTGCTATGCATATCGGACGTTACCCGAGGTAACGGTATAACTCACCGCGTCGGTAAGCGGTTTTGCGTTAAGTCTGTGTACATACTAGGCAAGATTTGGATGGACGAGAACATAAAGCTCAAGAACCACACGAATAGTGTGATGTTCTGGCTAGTTAGGGATAGGAGACCGTATGGGACGCCTATGGATTTTGGACAGGTTTTCAACCTGTTTGACAACGAGCCTAGCACTGCTACGGTGAAGAACGATCTTCGCGATCGTTTTCAGGTGATGCACAGGTTCTACGCCAAGGTGACCGGAGGGCAATATGCGAGCAACGAACAGGCGCTAGTGCGGCGTTTCTGGAGGGTCAATAACTATGTGGTGTACAACCACCAAGAGGCGGCGAAGTACGAGAACCATACGGAGAACGCCCTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCGACGCTTAAGATTCGAATCTATTTCTACGATTCGATATCAAATTAATAAAATTTGAATTTTATTGAATGGTTCTCATGTACATGGGATACATACGATCGATCAGTTGCGAAACTGACGGCCCTGATTACATTGTTAAGGCTAATAACGCCTAGCTGATCAAGATACATGAGAACTAGATGTTTAAACCTATTTAAATAGGTCTGCCCAGAAGCTGTCACCGAGACTGTCCAGACTTGGAAGTTGAGAAAGGCCATGTGGAGAGCCAATGCTCTCCTCACGCTGTGGTTGAACCGTATCTGGACGTGGTATATCCTCGTCTCTGCTGTGCAGGACGTCCTCCACGTCGTGTATCCTGAAATACAGGGGATTTGATATCTCCCATGTATACACGCCATTCTCCGCCTGAGGCACAGCTGATGACGTTCCCCTGTGCGTGAATTCATTGCTATGGCAGTTAAGGTGGATGTATATGGTACATCCACAGGTGAGGTCGATACGTCTACGGCGAATGGCTCTCCGCTTCGCGGCCTTGTGTTGAGCTTTGATACAGGGGGGATTCGAGGAAGACGAACCTCGCATTGTGAAGGGTCCAGGCTCTGAGTGCAGAATTCTCCTCTTTCTCGAGGAAGTCTTTATAGCTGGACCCTTCACCAGGATTGCAAAGCACGATTGATGGGATACCGCCTTTAATTTGAACAGGCTTTCCATATTTGCAGTTGCTTTGCCAGTCTCGTTGGGCCCCAACGAGCTCTTTCCAGTGCTTTAGCTTTAGGTATTGCGGTGGCAACGTCATCAATGACGTTGTATGCGACCTCGTGTTGAGTAGACCCTCGGATTGAAATCGAGGTGTCCACTGAGATAATTGTGTGGACCTTTAGTTCGCGCCCACGTTGTTTACCACGGCCTCGAATCCCCTTCCACGATTAACGACAATGGACGATAACTATTATTATGTTCAGGCCGCGCAGCGGCACACGAGCCGAAGTACTCTTCGGCCCAGAGACGCATCTCGTCAGGGACGTTAATAAACGAGGAGATAGGGAACGGAGGGACCCACGGATCATGAGCCTTGGAGAAAATCCTGTCCAGATTACTGGACAGATTGTGATATTGGAAGAGAAACTTCTCCGGCAGTTTCTCTCTGACGATTTGCATTGCTTCTTCTTTCGAAGAAGCATTTAACGCCTCTGCTGCAGCGTCGTTAGCCGTCTGCTGACCTCCTCTAGCAGATCGTCCGTCGATCTGGAATTGACCCCATTCGAGGATATCACCGTCCTTGTCGAGGTAGTGACTTGACGTCGGAGCTAGATTTAGCTCCCTGAACATTCGGATGGAAATGTGTTGACCTGGTAGGGGACGGTATATCGAAGAATCGGTTATTTGTACAGTTGTATTTCCCTTCAAACTGGATAAGCACGTGGAGATGAGGCTCCCCATTCTCGTGGAGCTCTCTTGCGACCTTGATGAATTTCTTGTTTGTTGGGGGGAAAAAGAGCCCTTCCGTGGCATTTTGGTAAATAAGAGTGTTCCCCCGATTGAGCTCGCTCTCAAAGTCTCTATGAATCGGGGGAACTGGGGGAACATTTATAGTAGAAGGTCCTTAGGCTCTAAAGGCCACGTGTCGGCCATCCGTTATAATATT
Gene Information
NCBI Accession
|
YP_004376206.1
|
Location
|
214-969 |
Protein Name
|
coat protein |
Coding Region
|
ATGCCTAAGCGGGATGCCCCATGGCGCTTGTCGGCGGGTACCACCAAGGTTAGCCGCAATGCTAACTACTCCCCTGGTGGAGCTACGGGCCCTCGACCAAGCAGGGCCTCTGCTTGGGTTAACAGGCCCATGTATAGGAAGCCGCGTATTTACCGGATGTACCGATCACCCGATGTGCCCAAAGGGTGCGAAGGCCCATGCAAGGTCCAGTCATACGAGCAGCGTCACGATATATCCCACACCGGGAAGGTGCTATGCATATCGGACGTTACCCGAGGTAACGGTATAACTCACCGCGTCGGTAAGCGGTTTTGCGTTAAGTCTGTGTACATACTAGGCAAGATTTGGATGGACGAGAACATAAAGCTCAAGAACCACACGAATAGTGTGATGTTCTGGCTAGTTAGGGATAGGAGACCGTATGGGACGCCTATGGATTTTGGACAGGTTTTCAACCTGTTTGACAACGAGCCTAGCACTGCTACGGTGAAGAACGATCTTCGCGATCGTTTTCAGGTGATGCACAGGTTCTACGCCAAGGTGACCGGAGGGCAATATGCGAGCAACGAACAGGCGCTAGTGCGGCGTTTCTGGAGGGTCAATAACTATGTGGTGTACAACCACCAAGAGGCGGCGAAGTACGAGAACCATACGGAGAACGCCCTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCGACGCTTAAGATTCGAATCTATTTCTACGATTCGATATCAAATTAA |
Protein Sequence
|
MPKRDAPWRLSAGTTKVSRNANYSPGGATGPRPSRASAWVNRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSYEQRHDISHTGKVLCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNLFDNEPSTATVKNDLRDRFQVMHRFYAKVTGGQYASNEQALVRRFWRVNNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSISN |
NCBI Accession
|
YP_004376207.1
|
Location
|
966-1367 |
Protein Name
|
Ren |
Coding Region
|
ATGAATTCACGCACAGGGGAACGTCATCAGCTGTGCCTCAGGCGGAGAATGGCGTGTATACATGGGAGATATCAAATCCCCTGTATTTCAGGATACACGACGTGGAGGACGTCCTGCACAGCAGAGACGAGGATATACCACGTCCAGATACGGTTCAACCACAGCGTGAGGAGAGCATTGGCTCTCCACATGGCCTTTCTCAACTTCCAAGTCTGGACAGTCTCGGTGACAGCTTCTGGGCAGACCTATTTAAATAGGTTTAAACATCTAGTTCTCATGTATCTTGATCAGCTAGGCGTTATTAGCCTTAACAATGTAATCAGGGCCGTCAGTTTCGCAACTGATCGATCGTATGTATCCCATGTACATGAGAACCATTCAATAAAATTCAAATTTTATTAA |
Protein Sequence
|
MNSRTGERHQLCLRRRMACIHGRYQIPCISGYTTWRTSCTAETRIYHVQIRFNHSVRRALALHMAFLNFQVWTVSVTASGQTYLNRFKHLVLMYLDQLGVISLNNVIRAVSFATDRSYVSHVHENHSIKFKFY |
NCBI Accession
|
YP_004376208.1
|
Location
|
1111-1503 |
Protein Name
|
Trap |
Coding Region
|
ATGCGAGGTTCGTCTTCCTCGAATCCCCCCTGTATCAAAGCTCAACACAAGGCCGCGAAGCGGAGAGCCATTCGCCGTAGACGTATCGACCTCACCTGTGGATGTACCATATACATCCACCTTAACTGCCATAGCAATGAATTCACGCACAGGGGAACGTCATCAGCTGTGCCTCAGGCGGAGAATGGCGTGTATACATGGGAGATATCAAATCCCCTGTATTTCAGGATACACGACGTGGAGGACGTCCTGCACAGCAGAGACGAGGATATACCACGTCCAGATACGGTTCAACCACAGCGTGAGGAGAGCATTGGCTCTCCACATGGCCTTTCTCAACTTCCAAGTCTGGACAGTCTCGGTGACAGCTTCTGGGCAGACCTATTTAAATAG |
Protein Sequence
|
MRGSSSSNPPCIKAQHKAAKRRAIRRRRIDLTCGCTIYIHLNCHSNEFTHRGTSSAVPQAENGVYTWEISNPLYFRIHDVEDVLHSRDEDIPRPDTVQPQREESIGSPHGLSQLPSLDSLGDSFWADLFK |