Cleome golden mosaic virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000893495.1
Isolate Brazil
Release date 2015/2/22
Submitter Fonseca,M.E.N., Boiteux,L.S., Fernandes,N.A.N., Costa,A.F.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_015397
ACCGGATGGCCGCGCGATCAAAAAGTGGCCCCCCTCTCCGTAAATCGCGGCGCGTTGTCGGGTTCGTGGTCCCCCACGAGTATCTTGGACTTTGTATGGCCCAATAACAATTGGGCTTGAAAGCCAATATATGAAAATATACTTGGCCGCTAAGTTGATAAAGTTGTATATAAGGGGACCACATTCAATGTTCCCCGCATTCTGTTGTACAGAATGCCTAAGCGGGATGCCCCATGGCGCTTGTCGGCGGGTACCACCAAGGTTAGCCGCAATGCTAACTACTCCCCTGGTGGAGCTACGGGCCCTCGACCAAGCAGGGCCTCTGCTTGGGTTAACAGGCCCATGTATAGGAAGCCGCGTATTTACCGGATGTACCGATCACCCGATGTGCCCAAAGGGTGCGAAGGCCCATGCAAGGTCCAGTCATACGAGCAGCGTCACGATATATCCCACACCGGGAAGGTGCTATGCATATCGGACGTTACCCGAGGTAACGGTATAACTCACCGCGTCGGTAAGCGGTTTTGCGTTAAGTCTGTGTACATACTAGGCAAGATTTGGATGGACGAGAACATAAAGCTCAAGAACCACACGAATAGTGTGATGTTCTGGCTAGTTAGGGATAGGAGACCGTATGGGACGCCTATGGATTTTGGACAGGTTTTCAACCTGTTTGACAACGAGCCTAGCACTGCTACGGTGAAGAACGATCTTCGCGATCGTTTTCAGGTGATGCACAGGTTCTACGCCAAGGTGACCGGAGGGCAATATGCGAGCAACGAACAGGCGCTAGTGCGGCGTTTCTGGAGGGTCAATAACTATGTGGTGTACAACCACCAAGAGGCGGCGAAGTACGAGAACCATACGGAGAACGCCCTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCGACGCTTAAGATTCGAATCTATTTCTACGATTCGATATCAAATTAATAAAATTTGAATTTTATTGAATGGTTCTCATGTACATGGGATACATACGATCGATCAGTTGCGAAACTGACGGCCCTGATTACATTGTTAAGGCTAATAACGCCTAGCTGATCAAGATACATGAGAACTAGATGTTTAAACCTATTTAAATAGGTCTGCCCAGAAGCTGTCACCGAGACTGTCCAGACTTGGAAGTTGAGAAAGGCCATGTGGAGAGCCAATGCTCTCCTCACGCTGTGGTTGAACCGTATCTGGACGTGGTATATCCTCGTCTCTGCTGTGCAGGACGTCCTCCACGTCGTGTATCCTGAAATACAGGGGATTTGATATCTCCCATGTATACACGCCATTCTCCGCCTGAGGCACAGCTGATGACGTTCCCCTGTGCGTGAATTCATTGCTATGGCAGTTAAGGTGGATGTATATGGTACATCCACAGGTGAGGTCGATACGTCTACGGCGAATGGCTCTCCGCTTCGCGGCCTTGTGTTGAGCTTTGATACAGGGGGGATTCGAGGAAGACGAACCTCGCATTGTGAAGGGTCCAGGCTCTGAGTGCAGAATTCTCCTCTTTCTCGAGGAAGTCTTTATAGCTGGACCCTTCACCAGGATTGCAAAGCACGATTGATGGGATACCGCCTTTAATTTGAACAGGCTTTCCATATTTGCAGTTGCTTTGCCAGTCTCGTTGGGCCCCAACGAGCTCTTTCCAGTGCTTTAGCTTTAGGTATTGCGGTGGCAACGTCATCAATGACGTTGTATGCGACCTCGTGTTGAGTAGACCCTCGGATTGAAATCGAGGTGTCCACTGAGATAATTGTGTGGACCTTTAGTTCGCGCCCACGTTGTTTACCACGGCCTCGAATCCCCTTCCACGATTAACGACAATGGACGATAACTATTATTATGTTCAGGCCGCGCAGCGGCACACGAGCCGAAGTACTCTTCGGCCCAGAGACGCATCTCGTCAGGGACGTTAATAAACGAGGAGATAGGGAACGGAGGGACCCACGGATCATGAGCCTTGGAGAAAATCCTGTCCAGATTACTGGACAGATTGTGATATTGGAAGAGAAACTTCTCCGGCAGTTTCTCTCTGACGATTTGCATTGCTTCTTCTTTCGAAGAAGCATTTAACGCCTCTGCTGCAGCGTCGTTAGCCGTCTGCTGACCTCCTCTAGCAGATCGTCCGTCGATCTGGAATTGACCCCATTCGAGGATATCACCGTCCTTGTCGAGGTAGTGACTTGACGTCGGAGCTAGATTTAGCTCCCTGAACATTCGGATGGAAATGTGTTGACCTGGTAGGGGACGGTATATCGAAGAATCGGTTATTTGTACAGTTGTATTTCCCTTCAAACTGGATAAGCACGTGGAGATGAGGCTCCCCATTCTCGTGGAGCTCTCTTGCGACCTTGATGAATTTCTTGTTTGTTGGGGGGAAAAAGAGCCCTTCCGTGGCATTTTGGTAAATAAGAGTGTTCCCCCGATTGAGCTCGCTCTCAAAGTCTCTATGAATCGGGGGAACTGGGGGAACATTTATAGTAGAAGGTCCTTAGGCTCTAAAGGCCACGTGTCGGCCATCCGTTATAATATT

Gene Information

NCBI Accession YP_004376206.1
Location 214-969
Protein Name coat protein
Coding Region ATGCCTAAGCGGGATGCCCCATGGCGCTTGTCGGCGGGTACCACCAAGGTTAGCCGCAATGCTAACTACTCCCCTGGTGGAGCTACGGGCCCTCGACCAAGCAGGGCCTCTGCTTGGGTTAACAGGCCCATGTATAGGAAGCCGCGTATTTACCGGATGTACCGATCACCCGATGTGCCCAAAGGGTGCGAAGGCCCATGCAAGGTCCAGTCATACGAGCAGCGTCACGATATATCCCACACCGGGAAGGTGCTATGCATATCGGACGTTACCCGAGGTAACGGTATAACTCACCGCGTCGGTAAGCGGTTTTGCGTTAAGTCTGTGTACATACTAGGCAAGATTTGGATGGACGAGAACATAAAGCTCAAGAACCACACGAATAGTGTGATGTTCTGGCTAGTTAGGGATAGGAGACCGTATGGGACGCCTATGGATTTTGGACAGGTTTTCAACCTGTTTGACAACGAGCCTAGCACTGCTACGGTGAAGAACGATCTTCGCGATCGTTTTCAGGTGATGCACAGGTTCTACGCCAAGGTGACCGGAGGGCAATATGCGAGCAACGAACAGGCGCTAGTGCGGCGTTTCTGGAGGGTCAATAACTATGTGGTGTACAACCACCAAGAGGCGGCGAAGTACGAGAACCATACGGAGAACGCCCTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCGACGCTTAAGATTCGAATCTATTTCTACGATTCGATATCAAATTAA
Protein Sequence MPKRDAPWRLSAGTTKVSRNANYSPGGATGPRPSRASAWVNRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSYEQRHDISHTGKVLCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNLFDNEPSTATVKNDLRDRFQVMHRFYAKVTGGQYASNEQALVRRFWRVNNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSISN

NCBI Accession YP_004376207.1
Location 966-1367
Protein Name Ren
Coding Region ATGAATTCACGCACAGGGGAACGTCATCAGCTGTGCCTCAGGCGGAGAATGGCGTGTATACATGGGAGATATCAAATCCCCTGTATTTCAGGATACACGACGTGGAGGACGTCCTGCACAGCAGAGACGAGGATATACCACGTCCAGATACGGTTCAACCACAGCGTGAGGAGAGCATTGGCTCTCCACATGGCCTTTCTCAACTTCCAAGTCTGGACAGTCTCGGTGACAGCTTCTGGGCAGACCTATTTAAATAGGTTTAAACATCTAGTTCTCATGTATCTTGATCAGCTAGGCGTTATTAGCCTTAACAATGTAATCAGGGCCGTCAGTTTCGCAACTGATCGATCGTATGTATCCCATGTACATGAGAACCATTCAATAAAATTCAAATTTTATTAA
Protein Sequence MNSRTGERHQLCLRRRMACIHGRYQIPCISGYTTWRTSCTAETRIYHVQIRFNHSVRRALALHMAFLNFQVWTVSVTASGQTYLNRFKHLVLMYLDQLGVISLNNVIRAVSFATDRSYVSHVHENHSIKFKFY

NCBI Accession YP_004376208.1
Location 1111-1503
Protein Name Trap
Coding Region ATGCGAGGTTCGTCTTCCTCGAATCCCCCCTGTATCAAAGCTCAACACAAGGCCGCGAAGCGGAGAGCCATTCGCCGTAGACGTATCGACCTCACCTGTGGATGTACCATATACATCCACCTTAACTGCCATAGCAATGAATTCACGCACAGGGGAACGTCATCAGCTGTGCCTCAGGCGGAGAATGGCGTGTATACATGGGAGATATCAAATCCCCTGTATTTCAGGATACACGACGTGGAGGACGTCCTGCACAGCAGAGACGAGGATATACCACGTCCAGATACGGTTCAACCACAGCGTGAGGAGAGCATTGGCTCTCCACATGGCCTTTCTCAACTTCCAAGTCTGGACAGTCTCGGTGACAGCTTCTGGGCAGACCTATTTAAATAG
Protein Sequence MRGSSSSNPPCIKAQHKAAKRRAIRRRRIDLTCGCTIYIHLNCHSNEFTHRGTSSAVPQAENGVYTWEISNPLYFRIHDVEDVLHSRDEDIPRPDTVQPQREESIGSPHGLSQLPSLDSLGDSFWADLFK