Paper mulberry leaf curl virus 1
Basic Information
Genomic Organization
JBrowse
Genome
ACCCCCCGCGTCAGGAGTGGGCCCCACTTGGGGCCCACGATGAGTGACAGCTCAAAAGGCGGAGACGAGCTGACCCTAATGTGGCCGACAAAAGAAAAAGCGGGAAAAGCAAAAGATAAAAACTCGTGACCGCTTTTTCTTTTGACCGGCGTGTCGAGGAAGTTCCTTCCTCGCGAAGGTGTCGGTGACCGACACTATAAATGGAACGTCGTCGTTTCAATATTGTTGTGAGATGTCAGATATATCAGAGGTAGAGTATTGTTTGTCTAGTTCCAGTCTCACAGGTTTTTTTATTTGTATATCGATATTTTTATTATTATTATTCTGCCAGTATGGATACGTGGCAGTGCAGATTAGGCGACTTGCCAGAAACATTGACCGGCTGCCTGCACATGCTGGCATGCAAGTTCCTCCAGAACATGGAGGAGAGGGCAGAAATGCATATGGCCCTCATTAATCCCGAGTACGGGATGCCTGAGGCCAAGAGTTACTATGAACACATGATTGCTAAACAGGAGATCCGTGATTTGCTTAGGTTAATTAGGAGATTAGGGAGAGTGAAGGACAAGAGTAGTGTTAATGGCGATTACAAGGTCTATGCAGAGGAGCTCAGGAATAGGACTGCTTCCAGGTTGGGGAAGAAGACAGAGGAGACGGGGCCCACCAAGGAAGAGCCGGTACCAGCGAAGTGTACCTGGTCTGAGTGGGCCAAGTCGTTGGGGCCGACGGTCAAAAAGGACAAGGAGGACCAGATACCGCAAGGTCCCGATTGGGTGTAAGGGCCCCTGTAAAACTTTAACTTATGATAATAAAGGTGTTATTGACCACACCGGTGGTTATATTGTTCATATATCGCGTATTGACCGTGGTGAAGAGTTTGTGGACCGTACTGGGAAACGTGTTAAAATTAAAGCGATTAGAATGATGGGTAAAATATATCTGGATGGTCAGTATAAGGCCAATCCTGGGGTGACAACTGTACGTTTGTATATTATTAGAGATGCTCGTCCTGGCAGTCAACAGCTTGCTTTTGATGCATTTATGGACATGAAAGATAAAGAACCCACAACGGCAATGATAAAAACAGATTACAGAGACCGTTTGAAAATATTAAAATATATAGATTTGGAAGTGGCAGGTGGCAAGGATTTTAGGGTGGATGAGCAGACTTTTGAATTATTTATGGATGGATTAAATCATGAAATTGTTTATAATCACAATGATCAAGGCACACTGGACAATATACTGAGTGGATCTCTTCATATTTATCAGACTTGTAGTAATCCTGATATGAAAGTTAATGTTAATGCGACTGTTCGTTTGTATATGTTTGATTCTCTACAGAATTGACGGTCAAGGAGACTGGGTAAAGGTATTCAAGGTGGACCCACATATTCACCCCCACACAGTCCCCCCCCTCCTGATAAGAAATCCGATACCAGTGGCCCAAGTGGTCCCCAGTCAGAACCGTACACACCAGAACAGAAGAAAAAGGTTAAAGGAGATGACCGAGAAGATAGATCAAGTCAACAATCATATACATCAGACTATTCGACATCTGGATCAACTAATAGAAGATCACCGTTTGAAGACCCAGAGTTAATAAAAATAAGAAATGAAATAATGGGGGATGCAGGATTTACTGTAAAGAATGTAGAATATTGGACACCGGATGTAAAAAAGAAGACAAAAAAGACCGTGTTGTAAAATATGACTTGTATTAATAAAATTTTTCATTTTCATATAAATAATATTCGATTACATTTGAATGCCACCAATCTTTCAGTTGGGGTGACATGTAGTGGTTCCAGTCCATATCTGGGTTAACTAAGATAATACATGGTAAACCACCTTTAACAATCCTATCTTTACCGTACTTAACATTAACAATAAAATCAGACTGCCCTCCCACAAGTGATTTTAGAGTTTCAGTCTTAATAGTCTTATAACTAATATCGTCTATAACATTATATAAAGCGAACTGATCATAAAAACTAAAACTTAATTTATTCATAAAATAATTATGCCGTCCTAGGCTTCTGGCCCATTGGGTCTTCCCTGTTCTGGACGGGCCACAGATGTAGAGGGACTGTCTCCTCCTGCCCTGCTGGTCTGGTTCCTGAAAGAATTTGATTCTAAGTCAGAAGGGACCCTATCTAGAAAAAACGACCCTCTGATGAGCGAGTCGTCGTCGTACACTTGTGGTGCACAGTCATTACACAGTACGTAGTTGGTCGTCCATCTGCTTACCAGTAGTACATTATCTGCGGCCCACTGTCTAACGGTGTCTGGAAGCCCAGGGAAATCGTGCCATCTGGGTGTGTACAGATCAGGTTGGGCTTGGAAATGGGCCTCGGCAAAGGCAGAGACTGCTGGCCATCTGAGGACGAAGTCCTGAGGTCTGTCAGCCCTGACTCTGGAGAGGAAGGTGTCCTTGTCGTTGGACTCAGCAAGAATTCTGGCCCAAATAGTGTTTGCCTTAACTGTTGTATCAGGGGATGATCGTTTGTCATTAAATTCCCCTGACTCGACAAAATTGCCGTCCTTTCTGATGTAGTCGTAGGAGGCCTTGGGGCTGATGAGTTTCTGAATATTTGGGTGATACGTCTTCCGTACCCCCTCCTGCACAGAGAAATCAAAAAAATTATGCCGTTTAATTGAGACCCTTTTGTTACACTGAAACATGGCATGCAGATGAGGCGAACCATCTGCATGTTTTTCAGATGCTACCAGAATATAATTAGGTGAAAAAGTGTTCAGGATATTGAGAAGATGGGTTAGAATTAGGTCCGGGGTGACCGGACATTTTGGGTAAGTGAGAAAGCCATTTTTGGCTTGGAAACGGAATTGGGCCGACCTTGAAGATTCGGCCCGGTCAGATGTGTTTGGTACACGTGGCATTTTTGGCTCCTGTCCGTACTTTGCAAAACTGGCTGATTCTTATGGAGTCAAGAGCCCTGAAGAGTCACGAAGAGAAAGGGAGTGTTTGTGAAGGAGTAGAGGGCTGATGGGGCTTCGCGTTGAGGAGCCAGAGCTGACGCGGGGGTATTAATATT
Gene Information
NCBI Accession
|
QJX74412.1
|
Location
|
233-457 |
Protein Name
|
V3 |
Coding Region
|
ATGTCAGATATATCAGAGGTAGAGTATTGTTTGTCTAGTTCCAGTCTCACAGGTTTTTTTATTTGTATATCGATATTTTTATTATTATTATTCTGCCAGTATGGATACGTGGCAGTGCAGATTAGGCGACTTGCCAGAAACATTGACCGGCTGCCTGCACATGCTGGCATGCAAGTTCCTCCAGAACATGGAGGAGAGGGCAGAAATGCATATGGCCCTCATTAA |
Protein Sequence
|
MSDISEVEYCLSSSSLTGFFICISIFLLLLFCQYGYVAVQIRRLARNIDRLPAHAGMQVPPEHGGEGRNAYGPH |
NCBI Accession
|
QJX74411.1
|
Location
|
333-779 |
Protein Name
|
V2 |
Coding Region
|
ATGGATACGTGGCAGTGCAGATTAGGCGACTTGCCAGAAACATTGACCGGCTGCCTGCACATGCTGGCATGCAAGTTCCTCCAGAACATGGAGGAGAGGGCAGAAATGCATATGGCCCTCATTAATCCCGAGTACGGGATGCCTGAGGCCAAGAGTTACTATGAACACATGATTGCTAAACAGGAGATCCGTGATTTGCTTAGGTTAATTAGGAGATTAGGGAGAGTGAAGGACAAGAGTAGTGTTAATGGCGATTACAAGGTCTATGCAGAGGAGCTCAGGAATAGGACTGCTTCCAGGTTGGGGAAGAAGACAGAGGAGACGGGGCCCACCAAGGAAGAGCCGGTACCAGCGAAGTGTACCTGGTCTGAGTGGGCCAAGTCGTTGGGGCCGACGGTCAAAAAGGACAAGGAGGACCAGATACCGCAAGGTCCCGATTGGGTGTAA |
Protein Sequence
|
MDTWQCRLGDLPETLTGCLHMLACKFLQNMEERAEMHMALINPEYGMPEAKSYYEHMIAKQEIRDLLRLIRRLGRVKDKSSVNGDYKVYAEELRNRTASRLGKKTEETGPTKEEPVPAKCTWSEWAKSLGPTVKKDKEDQIPQGPDWV |
NCBI Accession
|
QJX74410.1
|
Location
|
580-1350 |
Protein Name
|
V1 |
Coding Region
|
ATGGCGATTACAAGGTCTATGCAGAGGAGCTCAGGAATAGGACTGCTTCCAGGTTGGGGAAGAAGACAGAGGAGACGGGGCCCACCAAGGAAGAGCCGGTACCAGCGAAGTGTACCTGGTCTGAGTGGGCCAAGTCGTTGGGGCCGACGGTCAAAAAGGACAAGGAGGACCAGATACCGCAAGGTCCCGATTGGGTGTAAGGGCCCCTGTAAAACTTTAACTTATGATAATAAAGGTGTTATTGACCACACCGGTGGTTATATTGTTCATATATCGCGTATTGACCGTGGTGAAGAGTTTGTGGACCGTACTGGGAAACGTGTTAAAATTAAAGCGATTAGAATGATGGGTAAAATATATCTGGATGGTCAGTATAAGGCCAATCCTGGGGTGACAACTGTACGTTTGTATATTATTAGAGATGCTCGTCCTGGCAGTCAACAGCTTGCTTTTGATGCATTTATGGACATGAAAGATAAAGAACCCACAACGGCAATGATAAAAACAGATTACAGAGACCGTTTGAAAATATTAAAATATATAGATTTGGAAGTGGCAGGTGGCAAGGATTTTAGGGTGGATGAGCAGACTTTTGAATTATTTATGGATGGATTAAATCATGAAATTGTTTATAATCACAATGATCAAGGCACACTGGACAATATACTGAGTGGATCTCTTCATATTTATCAGACTTGTAGTAATCCTGATATGAAAGTTAATGTTAATGCGACTGTTCGTTTGTATATGTTTGATTCTCTACAGAATTGA |
Protein Sequence
|
MAITRSMQRSSGIGLLPGWGRRQRRRGPPRKSRYQRSVPGLSGPSRWGRRSKRTRRTRYRKVPIGCKGPCKTLTYDNKGVIDHTGGYIVHISRIDRGEEFVDRTGKRVKIKAIRMMGKIYLDGQYKANPGVTTVRLYIIRDARPGSQQLAFDAFMDMKDKEPTTAMIKTDYRDRLKILKYIDLEVAGGKDFRVDEQTFELFMDGLNHEIVYNHNDQGTLDNILSGSLHIYQTCSNPDMKVNVNATVRLYMFDSLQN |
NCBI Accession
|
QJX74413.1
|
Location
|
1301-1603 |
Protein Name
|
V4 |
Coding Region
|
ATGTTAATGCGACTGTTCGTTTGTATATGTTTGATTCTCTACAGAATTGACGGTCAAGGAGACTGGGTAAAGGTATTCAAGGTGGACCCACATATTCACCCCCACACAGTCCCCCCCCTCCTGATAAGAAATCCGATACCAGTGGCCCAAGTGGTCCCCAGTCAGAACCGTACACACCAGAACAGAAGAAAAAGGTTAAAGGAGATGACCGAGAAGATAGATCAAGTCAACAATCATATACATCAGACTATTCGACATCTGGATCAACTAATAGAAGATCACCGTTTGAAGACCCAGAGTTAA |
Protein Sequence
|
MLMRLFVCICLILYRIDGQGDWVKVFKVDPHIHPHTVPPLLIRNPIPVAQVVPSQNRTHQNRRKRLKEMTEKIDQVNNHIHQTIRHLDQLIEDHRLKTQS |
NCBI Accession
|
QJX74415.1
|
Location
|
NA |
Protein Name
|
C1:C2 |
Coding Region
|
ATGCCACGTGTACCAAACACATCTGACCGGGCCGAATCTTCAAGGTCGGCCCAATTCCGTTTCCAAGCCAAAAATGGCTTTCTCACTTACCCAAAATGTCCGGTCACCCCGGACCTAATTCTAACCCATCTTCTCAATATCCTGAACACTTTTTCACCTAATTATATTCTGGTAGCATCTGAAAAACATGCAGATGGTTCGCCTCATCTGCATGCCATGTTTCAGTGTAACAAAAGGGTCTCAATTAAACGGCATAATTTTTTTGATTTCTCTGTGCAGGAGGGGGTACGGAAGACGTATCACCCAAATATTCAGAAACTCATCAGCCCCAAGGCCTCCTACGACTACATCAGAAAGGACGGCAATTTTGTCGAGTCAGGGGAATTTAATGACAAACGATCATCCCCTGATACAACAGTTAAGGCAAACACTATTTGGGCCAGAATTCTTGCTGAGTCCAACGACAAGGACACCTTCCTCTCCAGAGTCAGGGCTGACAGACCTCAGGACTTCGTCCTCAGATGGCCAGCAGTCTCTGCCTTTGCCGAGGCCCATTTCCAAGCCCAACCTGATCTGTACACACCCAGATGGCACGATTTCCCTGGGCTTCCAGACACCGTTAGACAGTGGGCCGCAGATAATGTACTACTGGAACCAGACCAGCAGGGCAGGAGGAGACAGTCCCTCTACATCTGTGGCCCGTCCAGAACAGGGAAGACCCAATGGGCCAGAAGCCTAGGACGGCATAATTATTTTATGAATAAATTAAGTTTTAGTTTTTATGATCAGTTCGCTTTATATAATGTTATAGACGATATTAGTTATAAGACTATTAAGACTGAAACTCTAAAATCACTTGTGGGAGGGCAGTCTGATTTTATTGTTAATGTTAAGTACGGTAAAGATAGGATTGTTAAAGGTGGTTTACCATGTATTATCTTAGTTAACCCAGATATGGACTGGAACCACTACATGTCACCCCAACTGAAAGATTGGTGGCATTCAAATGTAATCGAATATTATTTATATGAAAATGAAAAATTTTATTAA |
Protein Sequence
|
MPRVPNTSDRAESSRSAQFRFQAKNGFLTYPKCPVTPDLILTHLLNILNTFSPNYILVASEKHADGSPHLHAMFQCNKRVSIKRHNFFDFSVQEGVRKTYHPNIQKLISPKASYDYIRKDGNFVESGEFNDKRSSPDTTVKANTIWARILAESNDKDTFLSRVRADRPQDFVLRWPAVSAFAEAHFQAQPDLYTPRWHDFPGLPDTVRQWAADNVLLEPDQQGRRRQSLYICGPSRTGKTQWARSLGRHNYFMNKLSFSFYDQFALYNVIDDISYKTIKTETLKSLVGGQSDFIVNVKYGKDRIVKGGLPCIILVNPDMDWNHYMSPQLKDWWHSNVIEYYLYENEKFY |
NCBI Accession
|
QJX74414.1
|
Location
|
2032-2901 |
Protein Name
|
C1 |
Coding Region
|
ATGCCACGTGTACCAAACACATCTGACCGGGCCGAATCTTCAAGGTCGGCCCAATTCCGTTTCCAAGCCAAAAATGGCTTTCTCACTTACCCAAAATGTCCGGTCACCCCGGACCTAATTCTAACCCATCTTCTCAATATCCTGAACACTTTTTCACCTAATTATATTCTGGTAGCATCTGAAAAACATGCAGATGGTTCGCCTCATCTGCATGCCATGTTTCAGTGTAACAAAAGGGTCTCAATTAAACGGCATAATTTTTTTGATTTCTCTGTGCAGGAGGGGGTACGGAAGACGTATCACCCAAATATTCAGAAACTCATCAGCCCCAAGGCCTCCTACGACTACATCAGAAAGGACGGCAATTTTGTCGAGTCAGGGGAATTTAATGACAAACGATCATCCCCTGATACAACAGTTAAGGCAAACACTATTTGGGCCAGAATTCTTGCTGAGTCCAACGACAAGGACACCTTCCTCTCCAGAGTCAGGGCTGACAGACCTCAGGACTTCGTCCTCAGATGGCCAGCAGTCTCTGCCTTTGCCGAGGCCCATTTCCAAGCCCAACCTGATCTGTACACACCCAGATGGCACGATTTCCCTGGGCTTCCAGACACCGTTAGACAGTGGGCCGCAGATAATGTACTACTGGTAAGCAGATGGACGACCAACTACGTACTGTGTAATGACTGTGCACCACAAGTGTACGACGACGACTCGCTCATCAGAGGGTCGTTTTTTCTAGATAGGGTCCCTTCTGACTTAGAATCAAATTCTTTCAGGAACCAGACCAGCAGGGCAGGAGGAGACAGTCCCTCTACATCTGTGGCCCGTCCAGAACAGGGAAGACCCAATGGGCCAGAAGCCTAG |
Protein Sequence
|
MPRVPNTSDRAESSRSAQFRFQAKNGFLTYPKCPVTPDLILTHLLNILNTFSPNYILVASEKHADGSPHLHAMFQCNKRVSIKRHNFFDFSVQEGVRKTYHPNIQKLISPKASYDYIRKDGNFVESGEFNDKRSSPDTTVKANTIWARILAESNDKDTFLSRVRADRPQDFVLRWPAVSAFAEAHFQAQPDLYTPRWHDFPGLPDTVRQWAADNVLLVSRWTTNYVLCNDCAPQVYDDDSLIRGSFFLDRVPSDLESNSFRNQTSRAGGDSPSTSVARPEQGRPNGPEA |