Mulberry crinkle leaf virus
Basic Information
Genomic Organization
JBrowse
Genome
ACAGCCCCCTCGCTTGGTGGCGCCACGTGGCGCCCGTGGATTGGCCCCGAAGGGGCCCACCATTAAATGCGCCGAAGGCGCAATGTGAACCCGACAAAAGGAGGCGGCCGACACAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGGAAAAAGCAAAAGCAGATTCGCCGACAGTTTTTAAAAGTGGGACCCACTAATAATTATTAAAGAGGTTGCTTGCGGAGCAAGGAACCGATGAGCTATAAATACCCCCCCGCCCCAAATATTTTTAAAATGTCTGAGTATTGCGAACTTGCCGAAGACAGTAAGTACTGTACAACGATTTTAATTGTTCAATTTATTGTTATTGCCCTAGCCATTCTCAGTTATGTCTTTGTGGAGTACCAAATTAGGAGAGTTGCCTCAGAGCTTGCAAGGCTGCGTAATTATGCTAGCCTGCAAGCAATTAATGGGCATGGAAGACCAAATCCTGAGCCAGAAAATAGACATGAGAACCGAGACCGGATTCGAGAGTTCAGTGGACCACTTGGTCCACCTTACTCAGTGCCGTAGACTTTTGAGACTGATAAGACGTTTTTCCAGGGTTAAGGACCGTGCTGCAGTAAATGGCGATTACCAGGAGCTCTGCTCTGAGATCAAGGCGGGGATGGAACCCCGGAACGATACCACGCAGGCCCAGAACTGCTCGAGCCACGCGGGTTGCAAGTGTTATGCGAACCCCGTGGAGAAGAAGAGGCCCAAGGTCGAGTTTGGCCAGAAGGAAGAGACGGCCCATAAACGCGTTGGGTCCAGTGAAACGTGGCACATTTGGAATTAAATTAGCCAGTATAAATCATACTGGTGGTAATGGGTATCATTTGACCCATTTTGACCATGGGGATGACACAAACCAAAGAACCGGAAGAAAAATAAAAATTAATGGAATTAACATTAGGGGTAAACTGTTCCTAAATAATCCTAGGACTAATTCTTATCACATTGTCAGGCTGTGGATAATCAGGGATACCAGACCGGGGTCGGAACCGGTGTCGTTCAGCTCGTTCATGGACATGCACGACAACGAGCCAATGACAGCGATGGTGAAGAAGGACTGGGGAGAACGGTTTCAAGTTCTCAAGGATCTGACCTTTCATTTAGTGGGAGCCAATGGTTTATCTTTCAACGAAGACGTGGTCGAGGAGTATTTTAAATTTAAGGGATATGTTTTGTATAATCACGAGGATTCTGGATCCTTGGCAAATGTACTTGAGAATGGCATATTTTTGTACGCAGCAACTTCACATCCGTCTGAGAATGTGACTTTGACTGCTAATTGTCGTGTTTATTTTTATGACGCAGAATAATTAATAAAGTTTATATTTTTTTTACAGATTAAGTTGAATGTTTTCAAGGAAAAAAAAAGAGAAAAAGGATGCCGGAGTCTCCCGACGATTGGACGATCATACCTCTGGATGGGAGTCCCCACAGTCAGGAGGATATGAATCCGGATCCGTTAGATCTAATTATGGTACAGATGGAAGAGATAATTCACAATCTGAATTTAATAGAACAGAGATTGAACGTGCAGTTAGAGCTGTTATCCCTGTTACTGGGTCGGGAGTTTTGTCCCGGCCAGAACAGTTTGAAAGACCAAGTAGATCACTACGGGAAGCACGAGAAAGGGAAGAAAGACTCAAAGAAGCGCAGAGGAGATTAGATGAAGAGTTTGAAAAGGTTGTTCATTCATTAATACTTTTAATAGAATTTATCACTAGCAGACATGTAATAAACTAATACATTATCATCGAACCATGGTTTAAGTGTACTTGCCATCCGTACAACCCAATCCATGTCTTCATTAACTAATACAATACAGGGAATTCCGCCACTAATACGAAAATCCTTCATATACTTGCCCTTAAGAATGATATCCTTTTGAGCACCTAATAATGATTTAAACCAAGAAGTACTAATCTTCTCGTATTCAATATCATCTATTACATTATATAATGCAAAATCATCATAATCTAAAAAACTTAAACTACCGGTAAAATAATTGTGTCTTCCTAAAGATCTGGCCCATTGCGTCTTGCCGGATCTGGTTGGTCCACAGATGTAGAGGCTGATGGGCCTGTCTGGCTTGGACTCGGGCTCCTGTTGCACATATATTGTTGTGGAACAGTTAGGCCCACTTCCCACCAAAAATCATCATGACATCTATAACACAAAACAGAATCGGCCCATTGACGACTTACGAATAGAATATTGTCCTTGGCCCATTGCTGAATAGGTTCAGGTAGGCCCGGGAAGTCAGTCCACCGGGGAACGTAAGGAATACTTCTTCGGCGGTAATGGTCTCTAGCGAAACCGGTAATTGACGGCCATCTGAGAACGTAGTCCTGTGGTCTTCGTTCTCGGACAAGGGCGAGGAAGGACTCCTCGTCTGTTGCCAAGGTAAGGATCTCTCCAAAGATCTTCTCAGCGCTTGCAACAGGACTTCGTCCTCGTGTGTTAAATTCTCCGTGTTCAATGAAGTGACCCTCCTTCTGGATATATTTTCTGACGGCGGCTGGCGAGGAGCACTTCTGGACATTCGGATGGTAGGTGCCCGAGGAGTGTTCCTGCGGCAAATCAAAGAAATTAGGATTTCTTGTTTCTAATTTTTTGTCCAATTGGACAATAGCATGAAAATGACTGTTGTCATCTTTATGTTTTTCTTCAGCCACACAGGCATACTTGACTGTGTATGAATTAAGAATTTGGAGTAAATGGGACATGACCCAAGTAATAGATTCGGGACATTGAGGGAAGGTAAGGAAAACATTCTTGGCAGCCAACCTGAAGTTAGAATTTGAAGCCATTTATAGAAGGGAAGGAGTTGAAAGCCGTACGAAGAGGGGAGAGTAAGGTTCTATAGGTAAGGAGGGATTGGTGGCAGCGGCAAATGAAGCGAGGGGGCCTTATATAATATT
Gene Information
NCBI Accession
|
AKM94181.1
|
Location
|
236-553 |
Protein Name
|
ORF1 |
Coding Region
|
ATGAGCTATAAATACCCCCCCGCCCCAAATATTTTTAAAATGTCTGAGTATTGCGAACTTGCCGAAGACAGTAAGTACTGTACAACGATTTTAATTGTTCAATTTATTGTTATTGCCCTAGCCATTCTCAGTTATGTCTTTGTGGAGTACCAAATTAGGAGAGTTGCCTCAGAGCTTGCAAGGCTGCGTAATTATGCTAGCCTGCAAGCAATTAATGGGCATGGAAGACCAAATCCTGAGCCAGAAAATAGACATGAGAACCGAGACCGGATTCGAGAGTTCAGTGGACCACTTGGTCCACCTTACTCAGTGCCGTAG |
Protein Sequence
|
MSYKYPPAPNIFKMSEYCELAEDSKYCTTILIVQFIVIALAILSYVFVEYQIRRVASELARLRNYASLQAINGHGRPNPEPENRHENRDRIREFSGPLGPPYSVP |
NCBI Accession
|
AKM94182.1
|
Location
|
369-818 |
Protein Name
|
putative movement protein |
Coding Region
|
ATGTCTTTGTGGAGTACCAAATTAGGAGAGTTGCCTCAGAGCTTGCAAGGCTGCGTAATTATGCTAGCCTGCAAGCAATTAATGGGCATGGAAGACCAAATCCTGAGCCAGAAAATAGACATGAGAACCGAGACCGGATTCGAGAGTTCAGTGGACCACTTGGTCCACCTTACTCAGTGCCGTAGACTTTTGAGACTGATAAGACGTTTTTCCAGGGTTAAGGACCGTGCTGCAGTAAATGGCGATTACCAGGAGCTCTGCTCTGAGATCAAGGCGGGGATGGAACCCCGGAACGATACCACGCAGGCCCAGAACTGCTCGAGCCACGCGGGTTGCAAGTGTTATGCGAACCCCGTGGAGAAGAAGAGGCCCAAGGTCGAGTTTGGCCAGAAGGAAGAGACGGCCCATAAACGCGTTGGGTCCAGTGAAACGTGGCACATTTGGAATTAA |
Protein Sequence
|
MSLWSTKLGELPQSLQGCVIMLACKQLMGMEDQILSQKIDMRTETGFESSVDHLVHLTQCRRLLRLIRRFSRVKDRAAVNGDYQELCSEIKAGMEPRNDTTQAQNCSSHAGCKCYANPVEKKRPKVEFGQKEETAHKRVGSSETWHIWN |
NCBI Accession
|
AKM94183.1
|
Location
|
607-1344 |
Protein Name
|
putative coat protein |
Coding Region
|
ATGGCGATTACCAGGAGCTCTGCTCTGAGATCAAGGCGGGGATGGAACCCCGGAACGATACCACGCAGGCCCAGAACTGCTCGAGCCACGCGGGTTGCAAGTGTTATGCGAACCCCGTGGAGAAGAAGAGGCCCAAGGTCGAGTTTGGCCAGAAGGAAGAGACGGCCCATAAACGCGTTGGGTCCAGTGAAACGTGGCACATTTGGAATTAAATTAGCCAGTATAAATCATACTGGTGGTAATGGGTATCATTTGACCCATTTTGACCATGGGGATGACACAAACCAAAGAACCGGAAGAAAAATAAAAATTAATGGAATTAACATTAGGGGTAAACTGTTCCTAAATAATCCTAGGACTAATTCTTATCACATTGTCAGGCTGTGGATAATCAGGGATACCAGACCGGGGTCGGAACCGGTGTCGTTCAGCTCGTTCATGGACATGCACGACAACGAGCCAATGACAGCGATGGTGAAGAAGGACTGGGGAGAACGGTTTCAAGTTCTCAAGGATCTGACCTTTCATTTAGTGGGAGCCAATGGTTTATCTTTCAACGAAGACGTGGTCGAGGAGTATTTTAAATTTAAGGGATATGTTTTGTATAATCACGAGGATTCTGGATCCTTGGCAAATGTACTTGAGAATGGCATATTTTTGTACGCAGCAACTTCACATCCGTCTGAGAATGTGACTTTGACTGCTAATTGTCGTGTTTATTTTTATGACGCAGAATAA |
Protein Sequence
|
MAITRSSALRSRRGWNPGTIPRRPRTARATRVASVMRTPWRRRGPRSSLARRKRRPINALGPVKRGTFGIKLASINHTGGNGYHLTHFDHGDDTNQRTGRKIKINGINIRGKLFLNNPRTNSYHIVRLWIIRDTRPGSEPVSFSSFMDMHDNEPMTAMVKKDWGERFQVLKDLTFHLVGANGLSFNEDVVEEYFKFKGYVLYNHEDSGSLANVLENGIFLYAATSHPSENVTLTANCRVYFYDAE |
NCBI Accession
|
AKM94184.1
|
Location
|
1382-1774 |
Protein Name
|
ORF4 |
Coding Region
|
ATGTTTTCAAGGAAAAAAAAAGAGAAAAAGGATGCCGGAGTCTCCCGACGATTGGACGATCATACCTCTGGATGGGAGTCCCCACAGTCAGGAGGATATGAATCCGGATCCGTTAGATCTAATTATGGTACAGATGGAAGAGATAATTCACAATCTGAATTTAATAGAACAGAGATTGAACGTGCAGTTAGAGCTGTTATCCCTGTTACTGGGTCGGGAGTTTTGTCCCGGCCAGAACAGTTTGAAAGACCAAGTAGATCACTACGGGAAGCACGAGAAAGGGAAGAAAGACTCAAAGAAGCGCAGAGGAGATTAGATGAAGAGTTTGAAAAGGTTGTTCATTCATTAATACTTTTAATAGAATTTATCACTAGCAGACATGTAATAAACTAA |
Protein Sequence
|
MFSRKKKEKKDAGVSRRLDDHTSGWESPQSGGYESGSVRSNYGTDGRDNSQSEFNRTEIERAVRAVIPVTGSGVLSRPEQFERPSRSLREAREREERLKEAQRRLDEEFEKVVHSLILLIEFITSRHVIN |
NCBI Accession
|
AKM94186.1
|
Location
|
NA |
Protein Name
|
putative C1:C2-like Rep protein |
Coding Region
|
GAGCCCGAGTCCAAGCCAGACAGGCCCATCAGCCTCTACATCTGTGGACCAACCAGATCCGGCAAGACGCAATGGGCCAGATCTTTAGGAAGACACAATTATTTTACCGGTAGTTTAAGTTTTTTAGATTATGATGATTTTGCATTATATAATGTAATAGATGATATTGAATACGAGAAGATTAGTACTTCTTGGTTTAAATCATTATTAGGTGCTCAAAAGGATATCATTCTTAAGGGCAAGTATATGAAGGATTTTCGTATTAGTGGCGGAATTCCCTGTATTGTATTAGTTAATGAAGACATGGATTGGGTTGTACGGATGGCAAGTACACTTAAACCATGGTTCGATGATAATGTATTAGTTTATTACATGTCTGCTAGTGATAAATTCTATTAA |
Protein Sequence
|
EPESKPDRPISLYICGPTRSGKTQWARSLGRHNYFTGSLSFLDYDDFALYNVIDDIEYEKISTSWFKSLLGAQKDIILKGKYMKDFRISGGIPCIVLVNEDMDWVVRMASTLKPWFDDNVLVYYMSASDKFY |
NCBI Accession
|
AKM94185.1
|
Location
|
2047-2841 |
Protein Name
|
putative RepA-like protein |
Coding Region
|
ATGGCTTCAAATTCTAACTTCAGGTTGGCTGCCAAGAATGTTTTCCTTACCTTCCCTCAATGTCCCGAATCTATTACTTGGGTCATGTCCCATTTACTCCAAATTCTTAATTCATACACAGTCAAGTATGCCTGTGTGGCTGAAGAAAAACATAAAGATGACAACAGTCATTTTCATGCTATTGTCCAATTGGACAAAAAATTAGAAACAAGAAATCCTAATTTCTTTGATTTGCCGCAGGAACACTCCTCGGGCACCTACCATCCGAATGTCCAGAAGTGCTCCTCGCCAGCCGCCGTCAGAAAATATATCCAGAAGGAGGGTCACTTCATTGAACACGGAGAATTTAACACACGAGGACGAAGTCCTGTTGCAAGCGCTGAGAAGATCTTTGGAGAGATCCTTACCTTGGCAACAGACGAGGAGTCCTTCCTCGCCCTTGTCCGAGAACGAAGACCACAGGACTACGTTCTCAGATGGCCGTCAATTACCGGTTTCGCTAGAGACCATTACCGCCGAAGAAGTATTCCTTACGTTCCCCGGTGGACTGACTTCCCGGGCCTACCTGAACCTATTCAGCAATGGGCCAAGGACAATATTCTATTCGTAAGTCGTCAATGGGCCGATTCTGTTTTGTGTTATAGATGTCATGATGATTTTTGGTGGGAAGTGGGCCTAACTGTTCCACAACAATATATGTGCAACAGGAGCCCGAGTCCAAGCCAGACAGGCCCATCAGCCTCTACATCTGTGGACCAACCAGATCCGGCAAGACGCAATGGGCCAGATCTTTAG |
Protein Sequence
|
MASNSNFRLAAKNVFLTFPQCPESITWVMSHLLQILNSYTVKYACVAEEKHKDDNSHFHAIVQLDKKLETRNPNFFDLPQEHSSGTYHPNVQKCSSPAAVRKYIQKEGHFIEHGEFNTRGRSPVASAEKIFGEILTLATDEESFLALVRERRPQDYVLRWPSITGFARDHYRRRSIPYVPRWTDFPGLPEPIQQWAKDNILFVSRQWADSVLCYRCHDDFWWEVGLTVPQQYMCNRSPSPSQTGPSASTSVDQPDPARRNGPDL |