Wheat dwarf India virus


Basic Information

Genus Mastrevirus
NCBI Assembly GCF_000894555.1
Isolate India
Release date 2015/2/22
Submitter Kumar,J., Singh,S.P., Tuli,R.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_017828
ACCCGCGTCGCCCGTAGCATCGCGACGTGGAACGTGGGCCTCTACGTGACACGGAGCCGCATTAATTAAAGTAAAGATGCCCGGTCGCTGTCAGCTTTAATTGGTAGATGGTGCGTCATTTTCCCGGCCCGCGCTGCCTTTCCTTTATAAAGAGGTGACTCGGAGGTGACTTCGATGGGGTCTGCTCGTCTAGGTGAGTTCTCTCCGCTTGCTTACCCTGGAAGCATCGCATATATCCCCCAATCTCCTCCCGCAGTTCAGAACGAGGACCCGTGGATCCGCCTGGTCTTCGTTTTTGTAGCGGTAATTGCTGCAATCGGTTTGCTTTATCTGAGTTACCGCTGGTTCGTCAGGGATGTCATCATACTCCTTCGGGCGAAGAGACAGCGGAGCACGGAAGAGATTGGTTTCGGCAATACTCCAGCTCGGCCCGACGGTGGACAGCCTAGCACCAGACGAGGACCTGATCCCTCGGCTGCTGCACCTCCTTACTGAGGCCAGGCTTCTTGTTCAGGAGCTTGCCGACGGATCCCTAACCGATGTCTCAGGTGAAGAAGAGGACCCGTCGGGGGGACGAAGTGGAGTGGTCAAAGCGCAAGCGGTTGAGGTCGTCCGGGTCGAAAGGATCGGCGACCAAGCTTAGGAAGCTCCCGGTGAGGCCCAGTCTGCAGATTCAGTCGCTGTACTATACGCTCACCACCTATGTAGACTTCAAGACAGGTGGTGAAAGTTATCTGATGGCCTCTTACGCCCGTGGTTCCGACGAAGGTGAGAGGCATACTAACGAGACTATGACGTATAAGGCAGCCCTGAACCTACATCTGTCTGCCTCCTCGGATGCTTGTAAATATTCTAATACAGGCACAGGCTGCATCTGGTTGATTTACGATGCACAGCCCACGGGAAATAAACCGTCTCCGAAGGACATCTTCGGGTACTCGGACAGCCTCAACTCCTGGCCAACAACATGGATGGTTTCTCGGGAGCAGTGCCATCGTTTCGTCGTTAAGAGGCGATGGACGTTCACCCTGGAGACTAACGGGAGGCTCGCATCTGATGTTCCTCCTTCGAACGTCGTCTGGCCTCCGTGCAAGAAGAGCATTAACTTCCACAAGTTCGCCAAGGGTCTGGGTGTGCGTACTGAGTGGAAGAATAAAACAGACGGGGGGATTGGCTCGATCAAAAAAGGTGCCTTGTACTTTGTAATAGCTCCGGGTAACGGAGTAGAGGGACGGATGTTTGGTACGATCCGTATGTACTTCAAGAGTATCGGTAACCAGTAAAGGTTGCTCATATATGTAATAAACCATATTTTATTAATAAAATGGCCATGCTTACAAGAAAAAACACACATACAATACAGGGTGGACAGGACAAAGGCGGGCGGATAAGGGTGGCCGCAAGGGGCAAAACATTAAAAAAAAACACACTCTGTTAAACAATTTCGGCCCCGCCGAAGAACTTCTCCGTTGGTTCCATCATGTAAATGATGGAATTGGCTTCGAAGTACTCCTGTTGTTCCGGGGTCATTGTCTTCAGCCAATCCTCATCGCTGTTAACGAGGATGATTGAGGGGATGCCTCCTTTTATTAACTTCTTCTTACCGTACTTAGGGTTTACGGTGAAGTCCCTCTGGGCCGCTACCAACTGTTTCCAGCAAGGGCAGAATTTAAATGGAATGTCGTCGATTATGTTATATGCCGCTTCTGGATCGTAGACTGTAAAGTCTACATTATTCTGCCAGTAGTTGTGTCGGCCCAGGGACCTTGCCCATGTAGATTTTCCGGTCCTTGTTGGACCGACGATGTAGAGGCTCTTTGGCCTTGTTCCTGCAGATGGATCCTGGAATTTTCCTGCAACCATGTCAGTTCTTGTACAGCCTCTGCTACGCTGTTTATGGTTGGTGTGTTTAGCATATAACAATAAGGGTGTACCTGGAAAAGGTTAGAATCTATCCAGTCTTGGATAGTTTCGTAGCAGTAGAGGTCTGGTACAGATTGGCCGTGGGGATTGCTGTACTCTGGTTGTTGTTCAGGGAAGAGCTTCGAGGCACTATACTCGAAGTTGTATAGTTTAGTGGCCCAGTCATATGGGAAGTTTCTTCTGACTTTACTTAGGTAGTCAGACTTGTTGGTGGAGTTCTCTATGATATCTTTCATGATATCATCTCTGGATCGTTTATTGGAATGCCTAGGACTGGTTCCTGCATTTCTCCCTCTGGGGATAAATGCTCCCTTCTCGCTAAAAGTAATTGGACCCTTAAGGATGTAATCTCGGCATAATGTTGGGTTCTTTGCAGCTTGTATGTGAGGATGATGACCATCAAAATCAAAGAAATGAGGATCATTGGTAGAAATTTGCTTGCGAGTCTGTAGGAGAGCATGGAGATGAGGTGTACCATCCTGGTGTAGTTCGACAGAAGCAACAGCATAGATAGGACTCCAAGTAGAAATGAGGTCCCAGAAGTGTTGAACCATTCCATATGGGCAGGAATTACAGTGGGGAAATGTAAGAAAGCAGTTATTACTGCGGTACCTGAAGGTTGAAGACGAGGCTTTGGGGTTAGCCGAGTTGTTCTCAGCGGAAGTCTGAGACATAGCGTGTCTGATGCTAACACTCTCTGGGACTTAGCCGCGTTTCCGTCGGCTCGAGTTTTATCGATACTCTCTCGATGCGCGATCTTCCCAGCGCTGCGGCGGGGTTTTTATAATGGTTTCCGATCTGACACCTGGGACCAGGGGGGCCCAGGAGCGATGGCGAAGGGCGCGCGCGGCAATAATATT

Gene Information

NCBI Accession YP_006273068.1
Location 175-495
Gene Name V1
Protein Name movement protein
Coding Region ATGGGGTCTGCTCGTCTAGGTGAGTTCTCTCCGCTTGCTTACCCTGGAAGCATCGCATATATCCCCCAATCTCCTCCCGCAGTTCAGAACGAGGACCCGTGGATCCGCCTGGTCTTCGTTTTTGTAGCGGTAATTGCTGCAATCGGTTTGCTTTATCTGAGTTACCGCTGGTTCGTCAGGGATGTCATCATACTCCTTCGGGCGAAGAGACAGCGGAGCACGGAAGAGATTGGTTTCGGCAATACTCCAGCTCGGCCCGACGGTGGACAGCCTAGCACCAGACGAGGACCTGATCCCTCGGCTGCTGCACCTCCTTACTGA
Protein Sequence MGSARLGEFSPLAYPGSIAYIPQSPPAVQNEDPWIRLVFVFVAVIAAIGLLYLSYRWFVRDVIILLRAKRQRSTEEIGFGNTPARPDGGQPSTRRGPDPSAAAPPY

NCBI Accession YP_006273069.1
Location 540-1283
Gene Name V2
Protein Name coat protein
Coding Region ATGTCTCAGGTGAAGAAGAGGACCCGTCGGGGGGACGAAGTGGAGTGGTCAAAGCGCAAGCGGTTGAGGTCGTCCGGGTCGAAAGGATCGGCGACCAAGCTTAGGAAGCTCCCGGTGAGGCCCAGTCTGCAGATTCAGTCGCTGTACTATACGCTCACCACCTATGTAGACTTCAAGACAGGTGGTGAAAGTTATCTGATGGCCTCTTACGCCCGTGGTTCCGACGAAGGTGAGAGGCATACTAACGAGACTATGACGTATAAGGCAGCCCTGAACCTACATCTGTCTGCCTCCTCGGATGCTTGTAAATATTCTAATACAGGCACAGGCTGCATCTGGTTGATTTACGATGCACAGCCCACGGGAAATAAACCGTCTCCGAAGGACATCTTCGGGTACTCGGACAGCCTCAACTCCTGGCCAACAACATGGATGGTTTCTCGGGAGCAGTGCCATCGTTTCGTCGTTAAGAGGCGATGGACGTTCACCCTGGAGACTAACGGGAGGCTCGCATCTGATGTTCCTCCTTCGAACGTCGTCTGGCCTCCGTGCAAGAAGAGCATTAACTTCCACAAGTTCGCCAAGGGTCTGGGTGTGCGTACTGAGTGGAAGAATAAAACAGACGGGGGGATTGGCTCGATCAAAAAAGGTGCCTTGTACTTTGTAATAGCTCCGGGTAACGGAGTAGAGGGACGGATGTTTGGTACGATCCGTATGTACTTCAAGAGTATCGGTAACCAGTAA
Protein Sequence MSQVKKRTRRGDEVEWSKRKRLRSSGSKGSATKLRKLPVRPSLQIQSLYYTLTTYVDFKTGGESYLMASYARGSDEGERHTNETMTYKAALNLHLSASSDACKYSNTGTGCIWLIYDAQPTGNKPSPKDIFGYSDSLNSWPTTWMVSREQCHRFVVKRRWTFTLETNGRLASDVPPSNVVWPPCKKSINFHKFAKGLGVRTEWKNKTDGGIGSIKKGALYFVIAPGNGVEGRMFGTIRMYFKSIGNQ

NCBI Accession YP_006273070.1
Location 1435-1810,1900-2597
Gene Name Rep
Protein Name replicase
Coding Region ATGTCTCAGACTTCCGCTGAGAACAACTCGGCTAACCCCAAAGCCTCGTCTTCAACCTTCAGGTACCGCAGTAATAACTGCTTTCTTACATTTCCCCACTGTAATTCCTGCCCATATGGAATGGTTCAACACTTCTGGGACCTCATTTCTACTTGGAGTCCTATCTATGCTGTTGCTTCTGTCGAACTACACCAGGATGGTACACCTCATCTCCATGCTCTCCTACAGACTCGCAAGCAAATTTCTACCAATGATCCTCATTTCTTTGATTTTGATGGTCATCATCCTCACATACAAGCTGCAAAGAACCCAACATTATGCCGAGATTACATCCTTAAGGGTCCAATTACTTTTAGCGAGAAGGGAGCATTTATCCCCAGAGGGAGAAATGCAGGAACCAGTCCTAGGCATTCCAATAAACGATCCAGAGATGATATCATGAAAGATATCATAGAGAACTCCACCAACAAGTCTGACTACCTAAGTAAAGTCAGAAGAAACTTCCCATATGACTGGGCCACTAAACTATACAACTTCGAGTATAGTGCCTCGAAGCTCTTCCCTGAACAACAACCAGAGTACAGCAATCCCCACGGCCAATCTGTACCAGACCTCTACTGCTACGAAACTATCCAAGACTGGATAGATTCTAACCTTTTCCAGGTACACCCTTATTGTTATATGCTAAACACACCAACCTACATCGTCGGTCCAACAAGGACCGGAAAATCTACATGGGCAAGGTCCCTGGGCCGACACAACTACTGGCAGAATAATGTAGACTTTACAGTCTACGATCCAGAAGCGGCATATAACATAATCGACGACATTCCATTTAAATTCTGCCCTTGCTGGAAACAGTTGGTAGCGGCCCAGAGGGACTTCACCGTAAACCCTAAGTACGGTAAGAAGAAGTTAATAAAAGGAGGCATCCCCTCAATCATCCTCGTTAACAGCGATGAGGATTGGCTGAAGACAATGACCCCGGAACAACAGGAGTACTTCGAAGCCAATTCCATCATTTACATGATGGAACCAACGGAGAAGTTCTTCGGCGGGGCCGAAATTGTTTAA
Protein Sequence MSQTSAENNSANPKASSSTFRYRSNNCFLTFPHCNSCPYGMVQHFWDLISTWSPIYAVASVELHQDGTPHLHALLQTRKQISTNDPHFFDFDGHHPHIQAAKNPTLCRDYILKGPITFSEKGAFIPRGRNAGTSPRHSNKRSRDDIMKDIIENSTNKSDYLSKVRRNFPYDWATKLYNFEYSASKLFPEQQPEYSNPHGQSVPDLYCYETIQDWIDSNLFQVHPYCYMLNTPTYIVGPTRTGKSTWARSLGRHNYWQNNVDFTVYDPEAAYNIIDDIPFKFCPCWKQLVAAQRDFTVNPKYGKKKLIKGGIPSIILVNSDEDWLKTMTPEQQEYFEANSIIYMMEPTEKFFGGAEIV

NCBI Accession YP_006273071.1
Location 1728-2597
Gene Name RepA
Protein Name RepA
Coding Region ATGTCTCAGACTTCCGCTGAGAACAACTCGGCTAACCCCAAAGCCTCGTCTTCAACCTTCAGGTACCGCAGTAATAACTGCTTTCTTACATTTCCCCACTGTAATTCCTGCCCATATGGAATGGTTCAACACTTCTGGGACCTCATTTCTACTTGGAGTCCTATCTATGCTGTTGCTTCTGTCGAACTACACCAGGATGGTACACCTCATCTCCATGCTCTCCTACAGACTCGCAAGCAAATTTCTACCAATGATCCTCATTTCTTTGATTTTGATGGTCATCATCCTCACATACAAGCTGCAAAGAACCCAACATTATGCCGAGATTACATCCTTAAGGGTCCAATTACTTTTAGCGAGAAGGGAGCATTTATCCCCAGAGGGAGAAATGCAGGAACCAGTCCTAGGCATTCCAATAAACGATCCAGAGATGATATCATGAAAGATATCATAGAGAACTCCACCAACAAGTCTGACTACCTAAGTAAAGTCAGAAGAAACTTCCCATATGACTGGGCCACTAAACTATACAACTTCGAGTATAGTGCCTCGAAGCTCTTCCCTGAACAACAACCAGAGTACAGCAATCCCCACGGCCAATCTGTACCAGACCTCTACTGCTACGAAACTATCCAAGACTGGATAGATTCTAACCTTTTCCAGGTACACCCTTATTGTTATATGCTAAACACACCAACCATAAACAGCGTAGCAGAGGCTGTACAAGAACTGACATGGTTGCAGGAAAATTCCAGGATCCATCTGCAGGAACAAGGCCAAAGAGCCTCTACATCGTCGGTCCAACAAGGACCGGAAAATCTACATGGGCAAGGTCCCTGGGCCGACACAACTACTGGCAGAATAATGTAG
Protein Sequence MSQTSAENNSANPKASSSTFRYRSNNCFLTFPHCNSCPYGMVQHFWDLISTWSPIYAVASVELHQDGTPHLHALLQTRKQISTNDPHFFDFDGHHPHIQAAKNPTLCRDYILKGPITFSEKGAFIPRGRNAGTSPRHSNKRSRDDIMKDIIENSTNKSDYLSKVRRNFPYDWATKLYNFEYSASKLFPEQQPEYSNPHGQSVPDLYCYETIQDWIDSNLFQVHPYCYMLNTPTINSVAEAVQELTWLQENSRIHLQEQGQRASTSSVQQGPENLHGQGPWADTTTGRIM