Urochloa streak virus
Basic Information
Genus |
Mastrevirus
|
NCBI Assembly |
GCF_000874425.1 |
Isolate |
Nigeria: Ejigbo |
Release date |
2015/2/13 |
Submitter |
Oluwafemi,S., Varsani,A., Monjane,A.L., Shepherd,D.N., Owor,B.E., Rybicki,E.P., Martin,D.P. |
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TAATATTACAGCGTCCCCTTTGGCGAGGGGCCCATGCTAAACCGGGCCCCGAGCGGTCCTTTGCTGCTTTGTGTGTGGCGTGATTTAAATCCAGCCCTTGCTTTCGACCGCCGACAGGCTTTGGTGCTATAAATCGGTCCTCTGCTTCTCCTTTGTATGGAGAGCCAAGGTGCGATCTATCCTTTGCCTCAAAGTGCTTTGCCGCGGGTACCCTCTGCAGCTCCGTCATTTTCAGGACTGCCGTGGAGTCGCGTCGGTGAGATAGTTATATTCACTTTTGTTGCAGTGCTAGCGTTGTATTTGCTGTGGTTGTGGGTGCTGAGAGATCTTATCTTCATTGTTAAGGCTCGGCGAGGTAGATCTACGGAGGAGCTGCAATTCGGGGACCTTGAGCGTGCCCCGCCTGTCCCTTCTGCCGACGGTCCTCCGTCCGTTCCAGCGCCTTCTTGTCCTGCCCAGCCTAGGTCTCCCTTTCTAGGCTGAGCTGGTAGGCATGTCGTCTTCCCTTGGCAAGAGGAAGAGGTCCGATGAGGGCGCTTGGTCTAAGGGGAAGTCTAAGAAGAAGGCAATGAGAGGCTCGTCCTCTCGCAGGCCTGGCCCTGTCAGGGGGCCTCGTCCTGCTCTCCAAATTGCGCAGTACATAGCTGCGGGCACCTCTATGGTCACTGTCCCGTCCGGTGGCGTTTGTGAGCTCCTTGCGACCTACGCAAGAGGATCCGATGAGGGTAACAGGCACACCAACGAGACTGTTACGTACAAGGTCGCCCTGGATTACCACTTCGTGCTCACAGCAGAGGCCTGCCGCTACTCGTCCATCGGTGTAGGGGTGGCTTGGTTGGTGTATGACGCACAGCCCACCGGCAACGCCCCTCAGGTCTCTGACATATTCCCACACGGCGACACTCTCGCTGCATTCCCGTATACTTGGAAGGTCGGTAGGGAAGTGTGTCATCGCTTCGTGGTGAAACGGCGGTGGACTTTCACGATGGAGTCTGACGGGAGGATCGGCTCCGATATTCCTAGAACGACGGATGCTTGGCCGCCCTGCAAGCGGAGTATTTACTTCCACAAGTTTGTCACCGGACTCGGTGTAAAAACCGAGTGGAAGAACGTAGCTGACGGAGGCGTAGGGGCCATTAAGAAGGGTGCTCTGTACCTGGTCATTGCCCCCGGCAATGGTCTCACTTTCACCGCGCATGGAATTGCGCGGTTGTACTTCAAGAGTGTTGGGAATCAGTGATTCCCTCGAATAATAAAATAATTTTTATAATTTCATTGATGAGCATGCAATGCGTACATTACATAGTCAGCCGATGGGCTGACGGAAAACACACATAAACAAGGCGGACAGGATAAAGGCGGGCGGCTAAGGGAAGCCGCATGGGGCAACACAACACACCCAACAGATCATTATTGAACATGCAGCCGCCGGCTTCAAACAGGGGAGAACCACTTCTCCCCTGGCGTCATAATGTATATGACGCAGTTTGCCTCGAAGTACTCCCGCTGTGCGGGAGTCATATCCTTCAGCCAGTCCTCATCTTCATTGGCGAGGACGATGGTCGGGATGCTTCTTGATGCGACCTTCTTGCGTTTGCCATACTTGGGGTTGACGATGTACTCCTTCTGACAGCCAATTAACTGCTTCCAACAAGGACAGTACTTGAAAGGAATATCGTCTACGATATTATACATAGCCTCTTCGTCATACGAGGTCCAGTCTACGTTATTCTGCCAGTAATTGTGGCGACCTTGGCTTCTAGCCCAGGTTGATTTCCCTGTCCTTGTAGGCCCGACGATGTAGAGGCTCTGCTTTCTGTCTGAAGGTAGTTGCTGTGTGTAACGTCATCGAGCCAGACAAGGTCAGACTCTGCCTGTTCTCGGGTGCAGTTGTTAATTAGCATGTATGCATCAGGGTGTACCTGGAAGATGTTGGGTTTGAGCCAATCATCTATTGTCTCTTTGCAGTGCAGCTCAGGCTCTGTCTGAGGATGAGGATGGATGTAAGGCTCAGGAATGTCAGGGAAGAGTTTATTGGCCGAGTACTCAAAGTACTGCAGCTTAGTGGCCCACTCGTAAGGGAGTTCATTCTGAAGCCTAGAGAGGTACTCCTGCTTGCTAGTAGAGTGCTCGATGATATCTCTAACGATATCATCCTTTGTTGGTTTAGGTGTGTGCTCATCGCCTTGGTGAGGAACGAAAGATTTCTTTCGTGGAATGAATGTACCTCTCTCCCATAGTGCGATTGGATCCTTCAGTATGTAGGCTCTTACCTTGTCTACAGACTTAGCTGATTGGATGTTCGGATGATGATCTTCTATGTCGAAGAATCTTGAATTTCTGGTCGTGACAGGCTTGACGCTCTGTGCAAGAGCATGGCAGTGCCATGTCCCGTCTTGGTGTGCCTCTCGACACACTATGATGTATGCCGGTTCCCATGGAGCTATCAAGCTCCATAGGGTGAGACCAATGGCTTCAGGCTCTAGAGGGCACTTGGGATAGGTGAGGTAGGTGTTTGCGTTCCGGTGCGTGAAGCTCCGTGACGCCACGCTGTTGGATGAAGATCCTACGGTAGCCATGAGCTCTAGCCTGGGTGCGATTTGCTCTCCCCAAACTCTATGCCTAGACAGTTCGCGTCGAAATCCCACCCACCCCATCCCCTTCTTATAGTAGGGATTGTTGGGCTGGGCCGGCTTTCAAATTTTTTGGGCCGGCCGACAAAGGGGACGCGAACAA
Gene Information
NCBI Accession
|
YP_001941153.1
|
Location
|
157-483 |
Protein Name
|
movement protein |
Coding Region
|
ATGGAGAGCCAAGGTGCGATCTATCCTTTGCCTCAAAGTGCTTTGCCGCGGGTACCCTCTGCAGCTCCGTCATTTTCAGGACTGCCGTGGAGTCGCGTCGGTGAGATAGTTATATTCACTTTTGTTGCAGTGCTAGCGTTGTATTTGCTGTGGTTGTGGGTGCTGAGAGATCTTATCTTCATTGTTAAGGCTCGGCGAGGTAGATCTACGGAGGAGCTGCAATTCGGGGACCTTGAGCGTGCCCCGCCTGTCCCTTCTGCCGACGGTCCTCCGTCCGTTCCAGCGCCTTCTTGTCCTGCCCAGCCTAGGTCTCCCTTTCTAGGCTGA |
Protein Sequence
|
MESQGAIYPLPQSALPRVPSAAPSFSGLPWSRVGEIVIFTFVAVLALYLLWLWVLRDLIFIVKARRGRSTEELQFGDLERAPPVPSADGPPSVPAPSCPAQPRSPFLG |
NCBI Accession
|
YP_001941154.1
|
Location
|
494-1240 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGTCTTCCCTTGGCAAGAGGAAGAGGTCCGATGAGGGCGCTTGGTCTAAGGGGAAGTCTAAGAAGAAGGCAATGAGAGGCTCGTCCTCTCGCAGGCCTGGCCCTGTCAGGGGGCCTCGTCCTGCTCTCCAAATTGCGCAGTACATAGCTGCGGGCACCTCTATGGTCACTGTCCCGTCCGGTGGCGTTTGTGAGCTCCTTGCGACCTACGCAAGAGGATCCGATGAGGGTAACAGGCACACCAACGAGACTGTTACGTACAAGGTCGCCCTGGATTACCACTTCGTGCTCACAGCAGAGGCCTGCCGCTACTCGTCCATCGGTGTAGGGGTGGCTTGGTTGGTGTATGACGCACAGCCCACCGGCAACGCCCCTCAGGTCTCTGACATATTCCCACACGGCGACACTCTCGCTGCATTCCCGTATACTTGGAAGGTCGGTAGGGAAGTGTGTCATCGCTTCGTGGTGAAACGGCGGTGGACTTTCACGATGGAGTCTGACGGGAGGATCGGCTCCGATATTCCTAGAACGACGGATGCTTGGCCGCCCTGCAAGCGGAGTATTTACTTCCACAAGTTTGTCACCGGACTCGGTGTAAAAACCGAGTGGAAGAACGTAGCTGACGGAGGCGTAGGGGCCATTAAGAAGGGTGCTCTGTACCTGGTCATTGCCCCCGGCAATGGTCTCACTTTCACCGCGCATGGAATTGCGCGGTTGTACTTCAAGAGTGTTGGGAATCAGTGA |
Protein Sequence
|
MSSSLGKRKRSDEGAWSKGKSKKKAMRGSSSRRPGPVRGPRPALQIAQYIAAGTSMVTVPSGGVCELLATYARGSDEGNRHTNETVTYKVALDYHFVLTAEACRYSSIGVGVAWLVYDAQPTGNAPQVSDIFPHGDTLAAFPYTWKVGREVCHRFVVKRRWTFTMESDGRIGSDIPRTTDAWPPCKRSIYFHKFVTGLGVKTEWKNVADGGVGAIKKGALYLVIAPGNGLTFTAHGIARLYFKSVGNQ |
NCBI Accession
|
YP_001941155.1
|
Location
|
1722-2657 |
Protein Name
|
replication associated protein |
Coding Region
|
ATGGGGTGGGTGGGATTTCGACGCGAACTGTCTAGGCATAGAGTTTGGGGAGAGCAAATCGCACCCAGGCTAGAGCTCATGGCTACCGTAGGATCTTCATCCAACAGCGTGGCGTCACGGAGCTTCACGCACCGGAACGCAAACACCTACCTCACCTATCCCAAGTGCCCTCTAGAGCCTGAAGCCATTGGTCTCACCCTATGGAGCTTGATAGCTCCATGGGAACCGGCATACATCATAGTGTGTCGAGAGGCACACCAAGACGGGACATGGCACTGCCATGCTCTTGCACAGAGCGTCAAGCCTGTCACGACCAGAAATTCAAGATTCTTCGACATAGAAGATCATCATCCGAACATCCAATCAGCTAAGTCTGTAGACAAGGTAAGAGCCTACATACTGAAGGATCCAATCGCACTATGGGAGAGAGGTACATTCATTCCACGAAAGAAATCTTTCGTTCCTCACCAAGGCGATGAGCACACACCTAAACCAACAAAGGATGATATCGTTAGAGATATCATCGAGCACTCTACTAGCAAGCAGGAGTACCTCTCTAGGCTTCAGAATGAACTCCCTTACGAGTGGGCCACTAAGCTGCAGTACTTTGAGTACTCGGCCAATAAACTCTTCCCTGACATTCCTGAGCCTTACATCCATCCTCATCCTCAGACAGAGCCTGAGCTGCACTGCAAAGAGACAATAGATGATTGGCTCAAACCCAACATCTTCCAGGTACACCCTGATGCATACATGCTAATTAACAACTGCACCCGAGAACAGGCAGAGTCTGACCTTGTCTGGCTCGATGACGTTACACACAGCAACTACCTTCAGACAGAAAGCAGAGCCTCTACATCGTCGGGCCTACAAGGACAGGGAAATCAACCTGGGCTAGAAGCCAAGGTCGCCACAATTACTGGCAGAATAACGTAG |
Protein Sequence
|
MGWVGFRRELSRHRVWGEQIAPRLELMATVGSSSNSVASRSFTHRNANTYLTYPKCPLEPEAIGLTLWSLIAPWEPAYIIVCREAHQDGTWHCHALAQSVKPVTTRNSRFFDIEDHHPNIQSAKSVDKVRAYILKDPIALWERGTFIPRKKSFVPHQGDEHTPKPTKDDIVRDIIEHSTSKQEYLSRLQNELPYEWATKLQYFEYSANKLFPDIPEPYIHPHPQTEPELHCKETIDDWLKPNIFQVHPDAYMLINNCTREQAESDLVWLDDVTHSNYLQTESRASTSSGLQGQGNQPGLEAKVATITGRIT |