Urochloa streak virus


Basic Information

Genus Mastrevirus
NCBI Assembly GCF_000874425.1
Isolate Nigeria: Ejigbo
Release date 2015/2/13
Submitter Oluwafemi,S., Varsani,A., Monjane,A.L., Shepherd,D.N., Owor,B.E., Rybicki,E.P., Martin,D.P.
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_010797
TAATATTACAGCGTCCCCTTTGGCGAGGGGCCCATGCTAAACCGGGCCCCGAGCGGTCCTTTGCTGCTTTGTGTGTGGCGTGATTTAAATCCAGCCCTTGCTTTCGACCGCCGACAGGCTTTGGTGCTATAAATCGGTCCTCTGCTTCTCCTTTGTATGGAGAGCCAAGGTGCGATCTATCCTTTGCCTCAAAGTGCTTTGCCGCGGGTACCCTCTGCAGCTCCGTCATTTTCAGGACTGCCGTGGAGTCGCGTCGGTGAGATAGTTATATTCACTTTTGTTGCAGTGCTAGCGTTGTATTTGCTGTGGTTGTGGGTGCTGAGAGATCTTATCTTCATTGTTAAGGCTCGGCGAGGTAGATCTACGGAGGAGCTGCAATTCGGGGACCTTGAGCGTGCCCCGCCTGTCCCTTCTGCCGACGGTCCTCCGTCCGTTCCAGCGCCTTCTTGTCCTGCCCAGCCTAGGTCTCCCTTTCTAGGCTGAGCTGGTAGGCATGTCGTCTTCCCTTGGCAAGAGGAAGAGGTCCGATGAGGGCGCTTGGTCTAAGGGGAAGTCTAAGAAGAAGGCAATGAGAGGCTCGTCCTCTCGCAGGCCTGGCCCTGTCAGGGGGCCTCGTCCTGCTCTCCAAATTGCGCAGTACATAGCTGCGGGCACCTCTATGGTCACTGTCCCGTCCGGTGGCGTTTGTGAGCTCCTTGCGACCTACGCAAGAGGATCCGATGAGGGTAACAGGCACACCAACGAGACTGTTACGTACAAGGTCGCCCTGGATTACCACTTCGTGCTCACAGCAGAGGCCTGCCGCTACTCGTCCATCGGTGTAGGGGTGGCTTGGTTGGTGTATGACGCACAGCCCACCGGCAACGCCCCTCAGGTCTCTGACATATTCCCACACGGCGACACTCTCGCTGCATTCCCGTATACTTGGAAGGTCGGTAGGGAAGTGTGTCATCGCTTCGTGGTGAAACGGCGGTGGACTTTCACGATGGAGTCTGACGGGAGGATCGGCTCCGATATTCCTAGAACGACGGATGCTTGGCCGCCCTGCAAGCGGAGTATTTACTTCCACAAGTTTGTCACCGGACTCGGTGTAAAAACCGAGTGGAAGAACGTAGCTGACGGAGGCGTAGGGGCCATTAAGAAGGGTGCTCTGTACCTGGTCATTGCCCCCGGCAATGGTCTCACTTTCACCGCGCATGGAATTGCGCGGTTGTACTTCAAGAGTGTTGGGAATCAGTGATTCCCTCGAATAATAAAATAATTTTTATAATTTCATTGATGAGCATGCAATGCGTACATTACATAGTCAGCCGATGGGCTGACGGAAAACACACATAAACAAGGCGGACAGGATAAAGGCGGGCGGCTAAGGGAAGCCGCATGGGGCAACACAACACACCCAACAGATCATTATTGAACATGCAGCCGCCGGCTTCAAACAGGGGAGAACCACTTCTCCCCTGGCGTCATAATGTATATGACGCAGTTTGCCTCGAAGTACTCCCGCTGTGCGGGAGTCATATCCTTCAGCCAGTCCTCATCTTCATTGGCGAGGACGATGGTCGGGATGCTTCTTGATGCGACCTTCTTGCGTTTGCCATACTTGGGGTTGACGATGTACTCCTTCTGACAGCCAATTAACTGCTTCCAACAAGGACAGTACTTGAAAGGAATATCGTCTACGATATTATACATAGCCTCTTCGTCATACGAGGTCCAGTCTACGTTATTCTGCCAGTAATTGTGGCGACCTTGGCTTCTAGCCCAGGTTGATTTCCCTGTCCTTGTAGGCCCGACGATGTAGAGGCTCTGCTTTCTGTCTGAAGGTAGTTGCTGTGTGTAACGTCATCGAGCCAGACAAGGTCAGACTCTGCCTGTTCTCGGGTGCAGTTGTTAATTAGCATGTATGCATCAGGGTGTACCTGGAAGATGTTGGGTTTGAGCCAATCATCTATTGTCTCTTTGCAGTGCAGCTCAGGCTCTGTCTGAGGATGAGGATGGATGTAAGGCTCAGGAATGTCAGGGAAGAGTTTATTGGCCGAGTACTCAAAGTACTGCAGCTTAGTGGCCCACTCGTAAGGGAGTTCATTCTGAAGCCTAGAGAGGTACTCCTGCTTGCTAGTAGAGTGCTCGATGATATCTCTAACGATATCATCCTTTGTTGGTTTAGGTGTGTGCTCATCGCCTTGGTGAGGAACGAAAGATTTCTTTCGTGGAATGAATGTACCTCTCTCCCATAGTGCGATTGGATCCTTCAGTATGTAGGCTCTTACCTTGTCTACAGACTTAGCTGATTGGATGTTCGGATGATGATCTTCTATGTCGAAGAATCTTGAATTTCTGGTCGTGACAGGCTTGACGCTCTGTGCAAGAGCATGGCAGTGCCATGTCCCGTCTTGGTGTGCCTCTCGACACACTATGATGTATGCCGGTTCCCATGGAGCTATCAAGCTCCATAGGGTGAGACCAATGGCTTCAGGCTCTAGAGGGCACTTGGGATAGGTGAGGTAGGTGTTTGCGTTCCGGTGCGTGAAGCTCCGTGACGCCACGCTGTTGGATGAAGATCCTACGGTAGCCATGAGCTCTAGCCTGGGTGCGATTTGCTCTCCCCAAACTCTATGCCTAGACAGTTCGCGTCGAAATCCCACCCACCCCATCCCCTTCTTATAGTAGGGATTGTTGGGCTGGGCCGGCTTTCAAATTTTTTGGGCCGGCCGACAAAGGGGACGCGAACAA

Gene Information

NCBI Accession YP_001941153.1
Location 157-483
Protein Name movement protein
Coding Region ATGGAGAGCCAAGGTGCGATCTATCCTTTGCCTCAAAGTGCTTTGCCGCGGGTACCCTCTGCAGCTCCGTCATTTTCAGGACTGCCGTGGAGTCGCGTCGGTGAGATAGTTATATTCACTTTTGTTGCAGTGCTAGCGTTGTATTTGCTGTGGTTGTGGGTGCTGAGAGATCTTATCTTCATTGTTAAGGCTCGGCGAGGTAGATCTACGGAGGAGCTGCAATTCGGGGACCTTGAGCGTGCCCCGCCTGTCCCTTCTGCCGACGGTCCTCCGTCCGTTCCAGCGCCTTCTTGTCCTGCCCAGCCTAGGTCTCCCTTTCTAGGCTGA
Protein Sequence MESQGAIYPLPQSALPRVPSAAPSFSGLPWSRVGEIVIFTFVAVLALYLLWLWVLRDLIFIVKARRGRSTEELQFGDLERAPPVPSADGPPSVPAPSCPAQPRSPFLG

NCBI Accession YP_001941154.1
Location 494-1240
Protein Name coat protein
Coding Region ATGTCGTCTTCCCTTGGCAAGAGGAAGAGGTCCGATGAGGGCGCTTGGTCTAAGGGGAAGTCTAAGAAGAAGGCAATGAGAGGCTCGTCCTCTCGCAGGCCTGGCCCTGTCAGGGGGCCTCGTCCTGCTCTCCAAATTGCGCAGTACATAGCTGCGGGCACCTCTATGGTCACTGTCCCGTCCGGTGGCGTTTGTGAGCTCCTTGCGACCTACGCAAGAGGATCCGATGAGGGTAACAGGCACACCAACGAGACTGTTACGTACAAGGTCGCCCTGGATTACCACTTCGTGCTCACAGCAGAGGCCTGCCGCTACTCGTCCATCGGTGTAGGGGTGGCTTGGTTGGTGTATGACGCACAGCCCACCGGCAACGCCCCTCAGGTCTCTGACATATTCCCACACGGCGACACTCTCGCTGCATTCCCGTATACTTGGAAGGTCGGTAGGGAAGTGTGTCATCGCTTCGTGGTGAAACGGCGGTGGACTTTCACGATGGAGTCTGACGGGAGGATCGGCTCCGATATTCCTAGAACGACGGATGCTTGGCCGCCCTGCAAGCGGAGTATTTACTTCCACAAGTTTGTCACCGGACTCGGTGTAAAAACCGAGTGGAAGAACGTAGCTGACGGAGGCGTAGGGGCCATTAAGAAGGGTGCTCTGTACCTGGTCATTGCCCCCGGCAATGGTCTCACTTTCACCGCGCATGGAATTGCGCGGTTGTACTTCAAGAGTGTTGGGAATCAGTGA
Protein Sequence MSSSLGKRKRSDEGAWSKGKSKKKAMRGSSSRRPGPVRGPRPALQIAQYIAAGTSMVTVPSGGVCELLATYARGSDEGNRHTNETVTYKVALDYHFVLTAEACRYSSIGVGVAWLVYDAQPTGNAPQVSDIFPHGDTLAAFPYTWKVGREVCHRFVVKRRWTFTMESDGRIGSDIPRTTDAWPPCKRSIYFHKFVTGLGVKTEWKNVADGGVGAIKKGALYLVIAPGNGLTFTAHGIARLYFKSVGNQ

NCBI Accession YP_001941155.1
Location 1722-2657
Protein Name replication associated protein
Coding Region ATGGGGTGGGTGGGATTTCGACGCGAACTGTCTAGGCATAGAGTTTGGGGAGAGCAAATCGCACCCAGGCTAGAGCTCATGGCTACCGTAGGATCTTCATCCAACAGCGTGGCGTCACGGAGCTTCACGCACCGGAACGCAAACACCTACCTCACCTATCCCAAGTGCCCTCTAGAGCCTGAAGCCATTGGTCTCACCCTATGGAGCTTGATAGCTCCATGGGAACCGGCATACATCATAGTGTGTCGAGAGGCACACCAAGACGGGACATGGCACTGCCATGCTCTTGCACAGAGCGTCAAGCCTGTCACGACCAGAAATTCAAGATTCTTCGACATAGAAGATCATCATCCGAACATCCAATCAGCTAAGTCTGTAGACAAGGTAAGAGCCTACATACTGAAGGATCCAATCGCACTATGGGAGAGAGGTACATTCATTCCACGAAAGAAATCTTTCGTTCCTCACCAAGGCGATGAGCACACACCTAAACCAACAAAGGATGATATCGTTAGAGATATCATCGAGCACTCTACTAGCAAGCAGGAGTACCTCTCTAGGCTTCAGAATGAACTCCCTTACGAGTGGGCCACTAAGCTGCAGTACTTTGAGTACTCGGCCAATAAACTCTTCCCTGACATTCCTGAGCCTTACATCCATCCTCATCCTCAGACAGAGCCTGAGCTGCACTGCAAAGAGACAATAGATGATTGGCTCAAACCCAACATCTTCCAGGTACACCCTGATGCATACATGCTAATTAACAACTGCACCCGAGAACAGGCAGAGTCTGACCTTGTCTGGCTCGATGACGTTACACACAGCAACTACCTTCAGACAGAAAGCAGAGCCTCTACATCGTCGGGCCTACAAGGACAGGGAAATCAACCTGGGCTAGAAGCCAAGGTCGCCACAATTACTGGCAGAATAACGTAG
Protein Sequence MGWVGFRRELSRHRVWGEQIAPRLELMATVGSSSNSVASRSFTHRNANTYLTYPKCPLEPEAIGLTLWSLIAPWEPAYIIVCREAHQDGTWHCHALAQSVKPVTTRNSRFFDIEDHHPNIQSAKSVDKVRAYILKDPIALWERGTFIPRKKSFVPHQGDEHTPKPTKDDIVRDIIEHSTSKQEYLSRLQNELPYEWATKLQYFEYSANKLFPDIPEPYIHPHPQTEPELHCKETIDDWLKPNIFQVHPDAYMLINNCTREQAESDLVWLDDVTHSNYLQTESRASTSSGLQGQGNQPGLEAKVATITGRIT