Chilli leaf curl Gonda virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_004787215.1
Isolate India: Gonda
Release date 2021/6/1
Submitter Khan,Z.A., Khan,J.A.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055136
ACCGGATGGCCCCGATTTTTTTTCATGTGGGCCCCACCACGCACGTGTTGACAAGGACAATTGGACCAATTAGAAACGCCGCTCAAAGCTAAATTGTGTGGTGGTCCCCTATATAAACTCGGGCTCCAAGTACCGCACACATACCAATGCGGGATCCGTTACTTAACCACTTACCCGAAACCGTTCACGGTCTTACGTGTCTGCTACCCGTTTTATATCTTTATACCGTAGAAATTACGCTTTCTCCAGACACTCTAAAATACGATTTAATCCGGGATTTGATATCTGTCATTAGGGCTAGAAAATATGTGGAAGCGACCAGCAGATATAATCATTTCCACTCCCGCCTCGAAGGTAAACCGCAGTTTCAACTTTGTCAGCCCATATACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAAGCATGGGCCAACAGGCCCATGAACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCGAGGGGCTGTGAAGGCCCGTGTAAGGTCCAGTCGTTTGAGTCCAGGCATGATATCCAGCACATTGGTAAAGTCATGTGTGTTAGTGATGTTACTCGTGGTACTGGTCTGACCCACAGAGTTGGTAAAAGGTTTTGTGTAAAATCTGTCTATGTTCTGGGCAAGATTTGGATGGATGAGAATATAAAGACTAAGAATCATACGAATAGTGTTATGTTTTTTCTTGTTAGGGATCGTAGGCCCGTTGATAAGCCCCAAGATTTTGGTGAGGTTTTTAACATGTTTGACAATGAGCCCAGTACGGCAACTGTCAAGAATGTGCATCGTGACAGGTACCAGGTTCTGAGGAAGTGGCAGGCAACCGTTACAGGTGGTCAATACGCATCGAAGGAGCAAGCTCTCGTGAAGAAGTTTATTAGAGTTAATAATTATGTTGTGTATAACCAGCAAGAGGCTGGCAAGTATGAGAATCATAGTGAGAATGCATTGATGTTGTATATGGCGTGTGCCCATGCCTCGAACCCTGTGTATGCTACGTTGAATATACCTATCTATTATTCCGAATCTGGAACGACCTGAAATTAATAAAGATTTAATTTTATTATGCTTGAAGTTTGCACATGAATTGCAGGTGCTATTACATTCCATAAAACATGGTCGACAGCTGTAATTACAGCGTTGATACTAATTACAGCGAAGTAAGTTAAAAACAGCAACACATGTGTCCTAAATACCCTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTCGGAAGGTGAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGAACCGTACTTGGACTGTTATGATGTCGTGGTTCCTCATGAATGGCCTGTTGTGGTGCTCGGTTATCTTGAAATACAGGGGATTTGTTATCTCCCAGATAAACACGGAATTCTCTGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTGAATCCATAGTCGTGGCAGCGTAATGCGATGAAATATGAACAGCCGCAGTCTAGGTCAACGCGACGACGCCAAGTCCCCCTCTTCGCCAGCCTGTGCTGCACTTTGATTGGAACCTGAGTAGAGTGGGCCTTCGAGGGTGATGAAGGTCGCATTCTTTAAAGCCCAATTTTTGAGTGCGTTATTTTTCTCTTCATCCAAGAACTCTTTATAGCTGGAGTTGGGTCCTGGATTGCAGAGGAAGATAGCGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTAGTGGGGATCGACGTCATCAATGACGTTGTACCAGGCGTCATTGCTGTAGACCTTTGGGCTAAGGTCTAGATGTCCACATAAATAGTTATGTGGACCTAATGACCTGGCCCACATCGTCTTCCCCGTCCTACTCTCACCCTCTATGATAATACTAATGGGTCTTAAAGGCCGCGCAGCGGCACCGAGAACATTCTCGGCAGCCCATTCCTCAAGTTCTTCGGGAACTTGATCAAAAGAAGAAGAACAAAAAGGAGAAATATAAACCTCCAAGGGAGGTGTAAAAATCCTATCTAAGTTACATTTTAAATTATGAAATTGTAAAACATAATCTTTGGGTAGTTTTTCCCTAAATATTGCTAGGGCCGCTGAAGACGACCCTGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCTGCCATCGATCTGAAACTTACCAAAATCAATGAAGTCTCCGTCTTTCTCCACATAGGCTTTGACATCTGAACGCGACTTAGCTCCCTGAATGTTCGGATGGAAATGGGTGGCGTTATTAGGGTGAGTGACATCGAAATGTCTATGGTTTCGGAGCTGTGTTGCCCCTTTGAACTGAATGAGCGCTTGGATAAGCAAGCTCCCATCTTGAGGGTTTTCTTGAGAAACTCTAGTGGCAGGTTTATCAGAAAAAGAAGAATACTTTTTAAGTAGCTCGAGCATTCGCTCGAAGGCAGTACGGCATTTTCCATGCGTAAAGAAGATATTTTTGGCATTCACACAAAACGACTGCGTACGAGGCATATTGAATTGGGGACACTTCAAAACTCTATGGAAGGGGGGACACCGGGGACCCATTTGTAAGGTGTCCCCAAATGGCATTCACGTAATAACGTGGAAAATTCCAAAATTTTCCCGCTCCAAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_010084446.1
Location 147-512
Gene Name AV2
Protein Name pre-coat protein
Coding Region ATGCGGGATCCGTTACTTAACCACTTACCCGAAACCGTTCACGGTCTTACGTGTCTGCTACCCGTTTTATATCTTTATACCGTAGAAATTACGCTTTCTCCAGACACTCTAAAATACGATTTAATCCGGGATTTGATATCTGTCATTAGGGCTAGAAAATATGTGGAAGCGACCAGCAGATATAATCATTTCCACTCCCGCCTCGAAGGTAAACCGCAGTTTCAACTTTGTCAGCCCATATACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAAGCATGGGCCAACAGGCCCATGAACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCGAGGGGCTGTGA
Protein Sequence MRDPLLNHLPETVHGLTCLLPVLYLYTVEITLSPDTLKYDLIRDLISVIRARKYVEATSRYNHFHSRLEGKPQFQLCQPIYQPCCCPHCPRHQSKSMGQQAHEQEAQDVQDVQKPRCSEGL

NCBI Accession YP_010084447.1
Location 307-1077
Gene Name AV1
Protein Name coat protein
Coding Region ATGTGGAAGCGACCAGCAGATATAATCATTTCCACTCCCGCCTCGAAGGTAAACCGCAGTTTCAACTTTGTCAGCCCATATACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAAGCATGGGCCAACAGGCCCATGAACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCGAGGGGCTGTGAAGGCCCGTGTAAGGTCCAGTCGTTTGAGTCCAGGCATGATATCCAGCACATTGGTAAAGTCATGTGTGTTAGTGATGTTACTCGTGGTACTGGTCTGACCCACAGAGTTGGTAAAAGGTTTTGTGTAAAATCTGTCTATGTTCTGGGCAAGATTTGGATGGATGAGAATATAAAGACTAAGAATCATACGAATAGTGTTATGTTTTTTCTTGTTAGGGATCGTAGGCCCGTTGATAAGCCCCAAGATTTTGGTGAGGTTTTTAACATGTTTGACAATGAGCCCAGTACGGCAACTGTCAAGAATGTGCATCGTGACAGGTACCAGGTTCTGAGGAAGTGGCAGGCAACCGTTACAGGTGGTCAATACGCATCGAAGGAGCAAGCTCTCGTGAAGAAGTTTATTAGAGTTAATAATTATGTTGTGTATAACCAGCAAGAGGCTGGCAAGTATGAGAATCATAGTGAGAATGCATTGATGTTGTATATGGCGTGTGCCCATGCCTCGAACCCTGTGTATGCTACGTTGAATATACCTATCTATTATTCCGAATCTGGAACGACCTGA
Protein Sequence MWKRPADIIISTPASKVNRSFNFVSPYTSRAAAPIVRVTKAKAWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWQATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENHSENALMLYMACAHASNPVYATLNIPIYYSESGTT

NCBI Accession YP_010084448.1
Location 1080-1484
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCAGAGAATTCCGTGTTTATCTGGGAGATAACAAATCCCCTGTATTTCAAGATAACCGAGCACCACAACAGGCCATTCATGAGGAACCACGACATCATAACAGTCCAAGTACGGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTCACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTTAGGACACATGTGTTGCTGTTTTTAACTTACTTCGCTGTAATTAGTATCAACGCTGTAATTACAGCTGTCGACCATGTTTTATGGAATGTAATAGCACCTGCAATTCATGTGCAAACTTCAAGCATAATAAAATTAAATCTTTATTAA
Protein Sequence MDSRTGEPITAAQAENSVFIWEITNPLYFKITEHHNRPFMRNHDIITVQVRFNHNLRKALGIHKCFLTFRIWTTLHPPTGLFLRVFRTHVLLFLTYFAVISINAVITAVDHVLWNVIAPAIHVQTSSIIKLNLY

NCBI Accession YP_010084449.1
Location 1225-1629
Gene Name AC2
Protein Name transcriptional activator protein
Coding Region ATGCGACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTGGCGAAGAGGGGGACTTGGCGTCGTCGCGTTGACCTAGACTGCGGCTGTTCATATTTCATCGCATTACGCTGCCACGACTATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCAGAGAATTCCGTGTTTATCTGGGAGATAACAAATCCCCTGTATTTCAAGATAACCGAGCACCACAACAGGCCATTCATGAGGAACCACGACATCATAACAGTCCAAGTACGGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTCACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTTAG
Protein Sequence MRPSSPSKAHSTQVPIKVQHRLAKRGTWRRRVDLDCGCSYFIALRCHDYGFTHRGTHHCSSSREFRVYLGDNKSPVFQDNRAPQQAIHEEPRHHNSPSTVQSQPEESVGDTQMFSHLPNLDDLTPSDWSFLKGI

NCBI Accession YP_010084450.1
Location 1532-2617
Gene Name AC1
Protein Name replication-associated protein
Coding Region ATGCCTCGTACGCAGTCGTTTTGTGTGAATGCCAAAAATATCTTCTTTACGCATGGAAAATGCCGTACTGCCTTCGAGCGAATGCTCGAGCTACTTAAAAAGTATTCTTCTTTTTCTGATAAACCTGCCACTAGAGTTTCTCAAGAAAACCCTCAAGATGGGAGCTTGCTTATCCAAGCGCTCATTCAGTTCAAAGGGGCAACACAGCTCCGAAACCATAGACATTTCGATGTCACTCACCCTAATAACGCCACCCATTTCCATCCGAACATTCAGGGAGCTAAGTCGCGTTCAGATGTCAAAGCCTATGTGGAGAAAGACGGAGACTTCATTGATTTTGGTAAGTTTCAGATCGATGGCAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCGTCTTCAGCGGCCCTAGCAATATTTAGGGAAAAACTACCCAAAGATTATGTTTTACAATTTCATAATTTAAAATGTAACTTAGATAGGATTTTTACACCTCCCTTGGAGGTTTATATTTCTCCTTTTTGTTCTTCTTCTTTTGATCAAGTTCCCGAAGAACTTGAGGAATGGGCTGCCGAGAATGTTCTCGGTGCCGCTGCGCGGCCTTTAAGACCCATTAGTATTATCATAGAGGGTGAGAGTAGGACGGGGAAGACGATGTGGGCCAGGTCATTAGGTCCACATAACTATTTATGTGGACATCTAGACCTTAGCCCAAAGGTCTACAGCAATGACGCCTGGTACAACGTCATTGATGACGTCGATCCCCACTACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAGGGACTGGCAATCAAATACAAAATACGGAAAGCCAGTTCAAATTAAAGGTGGAATTCCCGCTATCTTCCTCTGCAATCCAGGACCCAACTCCAGCTATAAAGAGTTCTTGGATGAAGAGAAAAATAACGCACTCAAAAATTGGGCTTTAAAGAATGCGACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTGGCGAAGAGGGGGACTTGGCGTCGTCGCGTTGA
Protein Sequence MPRTQSFCVNAKNIFFTHGKCRTAFERMLELLKKYSSFSDKPATRVSQENPQDGSLLIQALIQFKGATQLRNHRHFDVTHPNNATHFHPNIQGAKSRSDVKAYVEKDGDFIDFGKFQIDGRSARGGCQSANDAYAEAINSGSSSAALAIFREKLPKDYVLQFHNLKCNLDRIFTPPLEVYISPFCSSSFDQVPEELEEWAAENVLGAAARPLRPISIIIEGESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNNALKNWALKNATFITLEGPLYSGSNQSAAQAGEEGDLASSR

NCBI Accession YP_010084451.1
Location 2176-2460
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAGCTTGCTTATCCAAGCGCTCATTCAGTTCAAAGGGGCAACACAGCTCCGAAACCATAGACATTTCGATGTCACTCACCCTAATAACGCCACCCATTTCCATCCGAACATTCAGGGAGCTAAGTCGCGTTCAGATGTCAAAGCCTATGTGGAGAAAGACGGAGACTTCATTGATTTTGGTAAGTTTCAGATCGATGGCAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCGTCTTCAGCGGCCCTAG
Protein Sequence MGACLSKRSFSSKGQHSSETIDISMSLTLITPPISIRTFRELSRVQMSKPMWRKTETSLILVSFRSMADQLEEVANLPTTHMPRQSIQGRLQRP