Chilli leaf curl Gonda virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_004787215.1 |
Isolate |
India: Gonda |
Release date |
2021/6/1 |
Submitter |
Khan,Z.A., Khan,J.A. |
Host |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCCCGATTTTTTTTCATGTGGGCCCCACCACGCACGTGTTGACAAGGACAATTGGACCAATTAGAAACGCCGCTCAAAGCTAAATTGTGTGGTGGTCCCCTATATAAACTCGGGCTCCAAGTACCGCACACATACCAATGCGGGATCCGTTACTTAACCACTTACCCGAAACCGTTCACGGTCTTACGTGTCTGCTACCCGTTTTATATCTTTATACCGTAGAAATTACGCTTTCTCCAGACACTCTAAAATACGATTTAATCCGGGATTTGATATCTGTCATTAGGGCTAGAAAATATGTGGAAGCGACCAGCAGATATAATCATTTCCACTCCCGCCTCGAAGGTAAACCGCAGTTTCAACTTTGTCAGCCCATATACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAAGCATGGGCCAACAGGCCCATGAACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCGAGGGGCTGTGAAGGCCCGTGTAAGGTCCAGTCGTTTGAGTCCAGGCATGATATCCAGCACATTGGTAAAGTCATGTGTGTTAGTGATGTTACTCGTGGTACTGGTCTGACCCACAGAGTTGGTAAAAGGTTTTGTGTAAAATCTGTCTATGTTCTGGGCAAGATTTGGATGGATGAGAATATAAAGACTAAGAATCATACGAATAGTGTTATGTTTTTTCTTGTTAGGGATCGTAGGCCCGTTGATAAGCCCCAAGATTTTGGTGAGGTTTTTAACATGTTTGACAATGAGCCCAGTACGGCAACTGTCAAGAATGTGCATCGTGACAGGTACCAGGTTCTGAGGAAGTGGCAGGCAACCGTTACAGGTGGTCAATACGCATCGAAGGAGCAAGCTCTCGTGAAGAAGTTTATTAGAGTTAATAATTATGTTGTGTATAACCAGCAAGAGGCTGGCAAGTATGAGAATCATAGTGAGAATGCATTGATGTTGTATATGGCGTGTGCCCATGCCTCGAACCCTGTGTATGCTACGTTGAATATACCTATCTATTATTCCGAATCTGGAACGACCTGAAATTAATAAAGATTTAATTTTATTATGCTTGAAGTTTGCACATGAATTGCAGGTGCTATTACATTCCATAAAACATGGTCGACAGCTGTAATTACAGCGTTGATACTAATTACAGCGAAGTAAGTTAAAAACAGCAACACATGTGTCCTAAATACCCTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTCGGAAGGTGAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGAACCGTACTTGGACTGTTATGATGTCGTGGTTCCTCATGAATGGCCTGTTGTGGTGCTCGGTTATCTTGAAATACAGGGGATTTGTTATCTCCCAGATAAACACGGAATTCTCTGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTGAATCCATAGTCGTGGCAGCGTAATGCGATGAAATATGAACAGCCGCAGTCTAGGTCAACGCGACGACGCCAAGTCCCCCTCTTCGCCAGCCTGTGCTGCACTTTGATTGGAACCTGAGTAGAGTGGGCCTTCGAGGGTGATGAAGGTCGCATTCTTTAAAGCCCAATTTTTGAGTGCGTTATTTTTCTCTTCATCCAAGAACTCTTTATAGCTGGAGTTGGGTCCTGGATTGCAGAGGAAGATAGCGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTAGTGGGGATCGACGTCATCAATGACGTTGTACCAGGCGTCATTGCTGTAGACCTTTGGGCTAAGGTCTAGATGTCCACATAAATAGTTATGTGGACCTAATGACCTGGCCCACATCGTCTTCCCCGTCCTACTCTCACCCTCTATGATAATACTAATGGGTCTTAAAGGCCGCGCAGCGGCACCGAGAACATTCTCGGCAGCCCATTCCTCAAGTTCTTCGGGAACTTGATCAAAAGAAGAAGAACAAAAAGGAGAAATATAAACCTCCAAGGGAGGTGTAAAAATCCTATCTAAGTTACATTTTAAATTATGAAATTGTAAAACATAATCTTTGGGTAGTTTTTCCCTAAATATTGCTAGGGCCGCTGAAGACGACCCTGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCTGCCATCGATCTGAAACTTACCAAAATCAATGAAGTCTCCGTCTTTCTCCACATAGGCTTTGACATCTGAACGCGACTTAGCTCCCTGAATGTTCGGATGGAAATGGGTGGCGTTATTAGGGTGAGTGACATCGAAATGTCTATGGTTTCGGAGCTGTGTTGCCCCTTTGAACTGAATGAGCGCTTGGATAAGCAAGCTCCCATCTTGAGGGTTTTCTTGAGAAACTCTAGTGGCAGGTTTATCAGAAAAAGAAGAATACTTTTTAAGTAGCTCGAGCATTCGCTCGAAGGCAGTACGGCATTTTCCATGCGTAAAGAAGATATTTTTGGCATTCACACAAAACGACTGCGTACGAGGCATATTGAATTGGGGACACTTCAAAACTCTATGGAAGGGGGGACACCGGGGACCCATTTGTAAGGTGTCCCCAAATGGCATTCACGTAATAACGTGGAAAATTCCAAAATTTTCCCGCTCCAAAAAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
YP_010084446.1
|
Location
|
147-512 |
Gene Name
|
AV2 |
Protein Name
|
pre-coat protein |
Coding Region
|
ATGCGGGATCCGTTACTTAACCACTTACCCGAAACCGTTCACGGTCTTACGTGTCTGCTACCCGTTTTATATCTTTATACCGTAGAAATTACGCTTTCTCCAGACACTCTAAAATACGATTTAATCCGGGATTTGATATCTGTCATTAGGGCTAGAAAATATGTGGAAGCGACCAGCAGATATAATCATTTCCACTCCCGCCTCGAAGGTAAACCGCAGTTTCAACTTTGTCAGCCCATATACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAAGCATGGGCCAACAGGCCCATGAACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCGAGGGGCTGTGA |
Protein Sequence
|
MRDPLLNHLPETVHGLTCLLPVLYLYTVEITLSPDTLKYDLIRDLISVIRARKYVEATSRYNHFHSRLEGKPQFQLCQPIYQPCCCPHCPRHQSKSMGQQAHEQEAQDVQDVQKPRCSEGL |
NCBI Accession
|
YP_010084447.1
|
Location
|
307-1077 |
Gene Name
|
AV1 |
Protein Name
|
coat protein |
Coding Region
|
ATGTGGAAGCGACCAGCAGATATAATCATTTCCACTCCCGCCTCGAAGGTAAACCGCAGTTTCAACTTTGTCAGCCCATATACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAAGCATGGGCCAACAGGCCCATGAACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCGAGGGGCTGTGAAGGCCCGTGTAAGGTCCAGTCGTTTGAGTCCAGGCATGATATCCAGCACATTGGTAAAGTCATGTGTGTTAGTGATGTTACTCGTGGTACTGGTCTGACCCACAGAGTTGGTAAAAGGTTTTGTGTAAAATCTGTCTATGTTCTGGGCAAGATTTGGATGGATGAGAATATAAAGACTAAGAATCATACGAATAGTGTTATGTTTTTTCTTGTTAGGGATCGTAGGCCCGTTGATAAGCCCCAAGATTTTGGTGAGGTTTTTAACATGTTTGACAATGAGCCCAGTACGGCAACTGTCAAGAATGTGCATCGTGACAGGTACCAGGTTCTGAGGAAGTGGCAGGCAACCGTTACAGGTGGTCAATACGCATCGAAGGAGCAAGCTCTCGTGAAGAAGTTTATTAGAGTTAATAATTATGTTGTGTATAACCAGCAAGAGGCTGGCAAGTATGAGAATCATAGTGAGAATGCATTGATGTTGTATATGGCGTGTGCCCATGCCTCGAACCCTGTGTATGCTACGTTGAATATACCTATCTATTATTCCGAATCTGGAACGACCTGA |
Protein Sequence
|
MWKRPADIIISTPASKVNRSFNFVSPYTSRAAAPIVRVTKAKAWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWQATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENHSENALMLYMACAHASNPVYATLNIPIYYSESGTT |
NCBI Accession
|
YP_010084448.1
|
Location
|
1080-1484 |
Gene Name
|
AC3 |
Protein Name
|
replication enhancer protein |
Coding Region
|
ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCAGAGAATTCCGTGTTTATCTGGGAGATAACAAATCCCCTGTATTTCAAGATAACCGAGCACCACAACAGGCCATTCATGAGGAACCACGACATCATAACAGTCCAAGTACGGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTCACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTTAGGACACATGTGTTGCTGTTTTTAACTTACTTCGCTGTAATTAGTATCAACGCTGTAATTACAGCTGTCGACCATGTTTTATGGAATGTAATAGCACCTGCAATTCATGTGCAAACTTCAAGCATAATAAAATTAAATCTTTATTAA |
Protein Sequence
|
MDSRTGEPITAAQAENSVFIWEITNPLYFKITEHHNRPFMRNHDIITVQVRFNHNLRKALGIHKCFLTFRIWTTLHPPTGLFLRVFRTHVLLFLTYFAVISINAVITAVDHVLWNVIAPAIHVQTSSIIKLNLY |
NCBI Accession
|
YP_010084449.1
|
Location
|
1225-1629 |
Gene Name
|
AC2 |
Protein Name
|
transcriptional activator protein |
Coding Region
|
ATGCGACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTGGCGAAGAGGGGGACTTGGCGTCGTCGCGTTGACCTAGACTGCGGCTGTTCATATTTCATCGCATTACGCTGCCACGACTATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCAGAGAATTCCGTGTTTATCTGGGAGATAACAAATCCCCTGTATTTCAAGATAACCGAGCACCACAACAGGCCATTCATGAGGAACCACGACATCATAACAGTCCAAGTACGGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTCACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTTAG |
Protein Sequence
|
MRPSSPSKAHSTQVPIKVQHRLAKRGTWRRRVDLDCGCSYFIALRCHDYGFTHRGTHHCSSSREFRVYLGDNKSPVFQDNRAPQQAIHEEPRHHNSPSTVQSQPEESVGDTQMFSHLPNLDDLTPSDWSFLKGI |
NCBI Accession
|
YP_010084450.1
|
Location
|
1532-2617 |
Gene Name
|
AC1 |
Protein Name
|
replication-associated protein |
Coding Region
|
ATGCCTCGTACGCAGTCGTTTTGTGTGAATGCCAAAAATATCTTCTTTACGCATGGAAAATGCCGTACTGCCTTCGAGCGAATGCTCGAGCTACTTAAAAAGTATTCTTCTTTTTCTGATAAACCTGCCACTAGAGTTTCTCAAGAAAACCCTCAAGATGGGAGCTTGCTTATCCAAGCGCTCATTCAGTTCAAAGGGGCAACACAGCTCCGAAACCATAGACATTTCGATGTCACTCACCCTAATAACGCCACCCATTTCCATCCGAACATTCAGGGAGCTAAGTCGCGTTCAGATGTCAAAGCCTATGTGGAGAAAGACGGAGACTTCATTGATTTTGGTAAGTTTCAGATCGATGGCAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCGTCTTCAGCGGCCCTAGCAATATTTAGGGAAAAACTACCCAAAGATTATGTTTTACAATTTCATAATTTAAAATGTAACTTAGATAGGATTTTTACACCTCCCTTGGAGGTTTATATTTCTCCTTTTTGTTCTTCTTCTTTTGATCAAGTTCCCGAAGAACTTGAGGAATGGGCTGCCGAGAATGTTCTCGGTGCCGCTGCGCGGCCTTTAAGACCCATTAGTATTATCATAGAGGGTGAGAGTAGGACGGGGAAGACGATGTGGGCCAGGTCATTAGGTCCACATAACTATTTATGTGGACATCTAGACCTTAGCCCAAAGGTCTACAGCAATGACGCCTGGTACAACGTCATTGATGACGTCGATCCCCACTACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAGGGACTGGCAATCAAATACAAAATACGGAAAGCCAGTTCAAATTAAAGGTGGAATTCCCGCTATCTTCCTCTGCAATCCAGGACCCAACTCCAGCTATAAAGAGTTCTTGGATGAAGAGAAAAATAACGCACTCAAAAATTGGGCTTTAAAGAATGCGACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTGGCGAAGAGGGGGACTTGGCGTCGTCGCGTTGA |
Protein Sequence
|
MPRTQSFCVNAKNIFFTHGKCRTAFERMLELLKKYSSFSDKPATRVSQENPQDGSLLIQALIQFKGATQLRNHRHFDVTHPNNATHFHPNIQGAKSRSDVKAYVEKDGDFIDFGKFQIDGRSARGGCQSANDAYAEAINSGSSSAALAIFREKLPKDYVLQFHNLKCNLDRIFTPPLEVYISPFCSSSFDQVPEELEEWAAENVLGAAARPLRPISIIIEGESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNNALKNWALKNATFITLEGPLYSGSNQSAAQAGEEGDLASSR |
NCBI Accession
|
YP_010084451.1
|
Location
|
2176-2460 |
Gene Name
|
AC4 |
Protein Name
|
AC4 protein |
Coding Region
|
ATGGGAGCTTGCTTATCCAAGCGCTCATTCAGTTCAAAGGGGCAACACAGCTCCGAAACCATAGACATTTCGATGTCACTCACCCTAATAACGCCACCCATTTCCATCCGAACATTCAGGGAGCTAAGTCGCGTTCAGATGTCAAAGCCTATGTGGAGAAAGACGGAGACTTCATTGATTTTGGTAAGTTTCAGATCGATGGCAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCGTCTTCAGCGGCCCTAG |
Protein Sequence
|
MGACLSKRSFSSKGQHSSETIDISMSLTLITPPISIRTFRELSRVQMSKPMWRKTETSLILVSFRSMADQLEEVANLPTTHMPRQSIQGRLQRP |