Paspalum striate mosaic virus


Basic Information

Genus Mastrevirus
NCBI Assembly GCF_000899195.1
Isolate Australia
Release date 2015/2/22
Submitter Geering,A.D., Thomas,J.E., Holton,T., Hadfield,J., Varsani,A., Geering,A.G.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_018530
ATGGCGGAGTACCCTCAGTCTGCTTTGATTGTTTCTGGTGCGATTCCACGGCGAAGCCAGGACGAGAGCTTTGCCACGTCTTTGAAGGTCACTGCTTTATCTTTATTTGCAGCATTTATTGCTGCTGCAGTCTTGACATTCATTTACAAGACTTGCATTGCGGATTTCATTACGCAATTCCGTTTATCCGGTTTAAGCAGTGTAACTTCATCTGGCTTTGGGCGGACCGCTGAGGTTCCGCCAGCTGTCCCTACAAGGACAGCGTCTGAGGTTTCAATTCCCGTAAGGGAAGCTGTTTCTGCTCCTCCTTTGGTTTCTTCCGTGGTTGGTGTTTAGTTTCCATGGCAGCTTCGTCGAAGAGGAAGCGCGGGAGTACTTCCGCAACCAAGCGGCGCAAGAAGCCGCGGTACACGAAGTGGACCTCTGCCCGCAGCTCTAACAGAGATGCGCTGCAGGTACAGACCTTCACCTGGGGTGAAGATCAGGCGTTCAACGCCGGAGGACGTGCGATACTTCTCACGGCCTTTACGCGTGGTTCTGCCGAGAACCAACGCAAATCCCAGGAGACCATTACATACAAGGTTAGTATTAACCTTGGTGTGTCAGCATCTGCTACCGTCCTCAAGTACTGCTGCAAGAGCCAGCCATTATGCTGGCTCGTATACGATAAGTCCCCGACTGGGATTACGGACCTGACCCCATCAGACATCTTCGATGTGCCCTCGGGGTTACAGAACTGGCCTTCCACCTGGAAGGTCAAACGAGAAGCGTCTCATCGCTTCGTCGTCAAACGGCGTTGGCCGTTCACGTTATCATGCAACGGGAGTACGTTCCAGAAGGACTACACAAACCTGCCTGTCTGTAACACAGACAACCTGGTGTCTGTAACGAGGTTCGCCAAGGGACTTGGAGTGCGAACGGAGTGGAAGGACACAACGACAGCGGACGCGTCGGACATCAAGGGTGGAGCCCTCTACCTTGTGGTAGCCCCCGCTAACGGGCTTGTGTTTACAGCCCGTGGTGTAATCAAAGTCTACTTTAAGTCAGTGGGCAACCAGTAGCCCATTTGTAATGAGCCCATGGGGCGAACTTATGAAATAAAATCTTGCATTTTATTCATCGCATTGAGATGCATGCGTAGCAGCAAAGCAAATTACATAACTGGTTTTGTGGGTCGCGAGGGGGAACCCGGAGCACGCACCCAAAACACTAAATGAAACACACCCAAATAATCTATCTGAAAATGCCGGACGAGGACTCGCGAAGGAGTCCGAGATTACAAAGCTTCGAAGAAGCTTTCACCCGAGTACATGTAATGTACGACTGCGTTAGCATTGAACCAGTCAGCCTGACTAGGCTGCATTTGTTGAAGCCAGTCTTCATCCTCGTTCACGAGGATTATGCATGGAATGCCATTTGACAGCAGCCGTTTCTTGCCATACTTCGGATTTACTGTAATGTCCTTCTGGCTTCCGACAAGCCCTTTCCAACAAGGAACAAATTTAAACGGAATGTCATCTATGACATTATATCTTGCATTTTGAATTACGTGGAGGAAGTCCACGGAATGTTGCCAGTAGTTATGACTTCCGAGACTTCTTGCCCAAGAAGTCTTTCCTGTTCTTGTTGGACCACATATGTAGAGGGAACGTCTTCGTTCAGTAGGACTTCTGTCCTGCTTAGATCAGACATCCATTGGAGGTCAAGCTTTGCTTGTTCCTCCGAAACACCGTTGTGTATGGAATACGCATAAGGACTTACAGTGTATAATTCATCTCGGAGCCATGCTCCGATAACAGGATGTGTATCCTGCGATGGCATCCCGAAGGGATCCACATACGGTGGAGGAGTGGAAGGGAACAGCGATTCAGCTGAGAACTGAAACTGCTGCAACCTTGTTGCCCAGTCGAATGGGAAGGATTTCCTTACCATCGAGAGATAGTCCTCCTTGTTTGTGGAACTTTTAATGATTTCCGCCATTTTTGCATCCTTCGTAGAAGGTGCGTCCGCCTTCTTCTTTCTCGGACGCTTGATTTCCTGAAATACCCCATATTCCGCTTCGGATATTGGGGATTTCTTGCAGTATGATAATGCCTTCTTGGGCATTCTTGGATTTTGAACATTTGGATGAAATTCTTTGATGTCGAAGAATTTTGCACTTGTAGTGCGCACGTATTTTGAGCATTGTATTATACAATGCAGATGGTGAGATCCATCTTTATGTGCCTCTTGTGCCACGTAGATATACGTGGGACAGTATTTCTTCAATAAAGAAGAAATATATTCCAGGAGGAATACAGCCGTGAGGTTGCACTTACTGTATGTGAGGAACAGGTTCCTCGCTCTCACCTTGAAGCATGAAGAGGAGGGGGCGTCGATAGACTGCCCACCCCTTCCTGGGCTCTCCATTTGACTGCCCACTTCACTGTTGCTTGTCTCACTGACAAGTGAGGACATCTCGTCAGAAGCTATCGTGGATAGCTTCAACGCCCTTAGATCTTCTTTGAGATCCGAGGTTTTGAAAAACTCTCTTCCTAGACCGCTGCCGACTGCCGAGTTCTCCCCCCGAAGCCCTTCTTATATGGGCCGGGGGGCATTGCTTTCCGTGTGGGCCGGCCCGGTAAAGAGGCAGCGCAATAATATTACCGCTGCCCTCTTTACCCGAGGGCCCCATGCTCAACGGGGACCGAGGTGGCTTTGCCCGGGCCTTATCAGCCCACTAAGGGCTGTTTCCCGCAATCTGATTTCGTTTTTTGCTTTGACTGACATTTCTGCTTTGGATGCGGCTTTAAATAGCCGCATCGCACTACTACGCC

Gene Information

NCBI Accession YP_006659972.1
Location 1-336
Protein Name movement protein
Coding Region ATGGCGGAGTACCCTCAGTCTGCTTTGATTGTTTCTGGTGCGATTCCACGGCGAAGCCAGGACGAGAGCTTTGCCACGTCTTTGAAGGTCACTGCTTTATCTTTATTTGCAGCATTTATTGCTGCTGCAGTCTTGACATTCATTTACAAGACTTGCATTGCGGATTTCATTACGCAATTCCGTTTATCCGGTTTAAGCAGTGTAACTTCATCTGGCTTTGGGCGGACCGCTGAGGTTCCGCCAGCTGTCCCTACAAGGACAGCGTCTGAGGTTTCAATTCCCGTAAGGGAAGCTGTTTCTGCTCCTCCTTTGGTTTCTTCCGTGGTTGGTGTTTAG
Protein Sequence MAEYPQSALIVSGAIPRRSQDESFATSLKVTALSLFAAFIAAAVLTFIYKTCIADFITQFRLSGLSSVTSSGFGRTAEVPPAVPTRTASEVSIPVREAVSAPPLVSSVVGV

NCBI Accession YP_006659973.1
Location 342-1061
Protein Name coat protein
Coding Region ATGGCAGCTTCGTCGAAGAGGAAGCGCGGGAGTACTTCCGCAACCAAGCGGCGCAAGAAGCCGCGGTACACGAAGTGGACCTCTGCCCGCAGCTCTAACAGAGATGCGCTGCAGGTACAGACCTTCACCTGGGGTGAAGATCAGGCGTTCAACGCCGGAGGACGTGCGATACTTCTCACGGCCTTTACGCGTGGTTCTGCCGAGAACCAACGCAAATCCCAGGAGACCATTACATACAAGGTTAGTATTAACCTTGGTGTGTCAGCATCTGCTACCGTCCTCAAGTACTGCTGCAAGAGCCAGCCATTATGCTGGCTCGTATACGATAAGTCCCCGACTGGGATTACGGACCTGACCCCATCAGACATCTTCGATGTGCCCTCGGGGTTACAGAACTGGCCTTCCACCTGGAAGGTCAAACGAGAAGCGTCTCATCGCTTCGTCGTCAAACGGCGTTGGCCGTTCACGTTATCATGCAACGGGAGTACGTTCCAGAAGGACTACACAAACCTGCCTGTCTGTAACACAGACAACCTGGTGTCTGTAACGAGGTTCGCCAAGGGACTTGGAGTGCGAACGGAGTGGAAGGACACAACGACAGCGGACGCGTCGGACATCAAGGGTGGAGCCCTCTACCTTGTGGTAGCCCCCGCTAACGGGCTTGTGTTTACAGCCCGTGGTGTAATCAAAGTCTACTTTAAGTCAGTGGGCAACCAGTAG
Protein Sequence MAASSKRKRGSTSATKRRKKPRYTKWTSARSSNRDALQVQTFTWGEDQAFNAGGRAILLTAFTRGSAENQRKSQETITYKVSINLGVSASATVLKYCCKSQPLCWLVYDKSPTGITDLTPSDIFDVPSGLQNWPSTWKVKREASHRFVVKRRWPFTLSCNGSTFQKDYTNLPVCNTDNLVSVTRFAKGLGVRTEWKDTTTADASDIKGGALYLVVAPANGLVFTARGVIKVYFKSVGNQ

NCBI Accession YP_006659974.1
Location 1277-1675,1762-2457
Protein Name Rep
Coding Region ATGTCCTCACTTGTCAGTGAGACAAGCAACAGTGAAGTGGGCAGTCAAATGGAGAGCCCAGGAAGGGGTGGGCAGTCTATCGACGCCCCCTCCTCTTCATGCTTCAAGGTGAGAGCGAGGAACCTGTTCCTCACATACAGTAAGTGCAACCTCACGGCTGTATTCCTCCTGGAATATATTTCTTCTTTATTGAAGAAATACTGTCCCACGTATATCTACGTGGCACAAGAGGCACATAAAGATGGATCTCACCATCTGCATTGTATAATACAATGCTCAAAATACGTGCGCACTACAAGTGCAAAATTCTTCGACATCAAAGAATTTCATCCAAATGTTCAAAATCCAAGAATGCCCAAGAAGGCATTATCATACTGCAAGAAATCCCCAATATCCGAAGCGGAATATGGGGTATTTCAGGAAATCAAGCGTCCGAGAAAGAAGAAGGCGGACGCACCTTCTACGAAGGATGCAAAAATGGCGGAAATCATTAAAAGTTCCACAAACAAGGAGGACTATCTCTCGATGGTAAGGAAATCCTTCCCATTCGACTGGGCAACAAGGTTGCAGCAGTTTCAGTTCTCAGCTGAATCGCTGTTCCCTTCCACTCCTCCACCGTATGTGGATCCCTTCGGGATGCCATCGCAGGATACACATCCTGTTATCGGAGCATGGCTCCGAGATGAATTATACACTGACAGAAGTCCTACTGAACGAAGACGTTCCCTCTACATATGTGGTCCAACAAGAACAGGAAAGACTTCTTGGGCAAGAAGTCTCGGAAGTCATAACTACTGGCAACATTCCGTGGACTTCCTCCACGTAATTCAAAATGCAAGATATAATGTCATAGATGACATTCCGTTTAAATTTGTTCCTTGTTGGAAAGGGCTTGTCGGAAGCCAGAAGGACATTACAGTAAATCCGAAGTATGGCAAGAAACGGCTGCTGTCAAATGGCATTCCATGCATAATCCTCGTGAACGAGGATGAAGACTGGCTTCAACAAATGCAGCCTAGTCAGGCTGACTGGTTCAATGCTAACGCAGTCGTACATTACATGTACTCGGGTGAAAGCTTCTTCGAAGCTTTGTAA
Protein Sequence MSSLVSETSNSEVGSQMESPGRGGQSIDAPSSSCFKVRARNLFLTYSKCNLTAVFLLEYISSLLKKYCPTYIYVAQEAHKDGSHHLHCIIQCSKYVRTTSAKFFDIKEFHPNVQNPRMPKKALSYCKKSPISEAEYGVFQEIKRPRKKKADAPSTKDAKMAEIIKSSTNKEDYLSMVRKSFPFDWATRLQQFQFSAESLFPSTPPPYVDPFGMPSQDTHPVIGAWLRDELYTDRSPTERRRSLYICGPTRTGKTSWARSLGSHNYWQHSVDFLHVIQNARYNVIDDIPFKFVPCWKGLVGSQKDITVNPKYGKKRLLSNGIPCIILVNEDEDWLQQMQPSQADWFNANAVVHYMYSGESFFEAL

NCBI Accession YP_006659975.1
Location 1546-2457
Protein Name RepA
Coding Region ATGTCCTCACTTGTCAGTGAGACAAGCAACAGTGAAGTGGGCAGTCAAATGGAGAGCCCAGGAAGGGGTGGGCAGTCTATCGACGCCCCCTCCTCTTCATGCTTCAAGGTGAGAGCGAGGAACCTGTTCCTCACATACAGTAAGTGCAACCTCACGGCTGTATTCCTCCTGGAATATATTTCTTCTTTATTGAAGAAATACTGTCCCACGTATATCTACGTGGCACAAGAGGCACATAAAGATGGATCTCACCATCTGCATTGTATAATACAATGCTCAAAATACGTGCGCACTACAAGTGCAAAATTCTTCGACATCAAAGAATTTCATCCAAATGTTCAAAATCCAAGAATGCCCAAGAAGGCATTATCATACTGCAAGAAATCCCCAATATCCGAAGCGGAATATGGGGTATTTCAGGAAATCAAGCGTCCGAGAAAGAAGAAGGCGGACGCACCTTCTACGAAGGATGCAAAAATGGCGGAAATCATTAAAAGTTCCACAAACAAGGAGGACTATCTCTCGATGGTAAGGAAATCCTTCCCATTCGACTGGGCAACAAGGTTGCAGCAGTTTCAGTTCTCAGCTGAATCGCTGTTCCCTTCCACTCCTCCACCGTATGTGGATCCCTTCGGGATGCCATCGCAGGATACACATCCTGTTATCGGAGCATGGCTCCGAGATGAATTATACACTGTAAGTCCTTATGCGTATTCCATACACAACGGTGTTTCGGAGGAACAAGCAAAGCTTGACCTCCAATGGATGTCTGATCTAAGCAGGACAGAAGTCCTACTGAACGAAGACGTTCCCTCTACATATGTGGTCCAACAAGAACAGGAAAGACTTCTTGGGCAAGAAGTCTCGGAAGTCATAACTACTGGCAACATTCCGTGGACTTCCTCCACGTAA
Protein Sequence MSSLVSETSNSEVGSQMESPGRGGQSIDAPSSSCFKVRARNLFLTYSKCNLTAVFLLEYISSLLKKYCPTYIYVAQEAHKDGSHHLHCIIQCSKYVRTTSAKFFDIKEFHPNVQNPRMPKKALSYCKKSPISEAEYGVFQEIKRPRKKKADAPSTKDAKMAEIIKSSTNKEDYLSMVRKSFPFDWATRLQQFQFSAESLFPSTPPPYVDPFGMPSQDTHPVIGAWLRDELYTVSPYAYSIHNGVSEEQAKLDLQWMSDLSRTEVLLNEDVPSTYVVQQEQERLLGQEVSEVITTGNIPWTSST