Maize striate mosaic virus


Basic Information

Genus Mastrevirus
NCBI Assembly GCF_004130985.1
Isolate Brazil
Release date 2019/2/12
Submitter Fontenele,R.S., Alves-Freitas,D.M.T., Silva,P.I.T., Foresti,J., Silva,P.R., Godinho,M.T., Varsani,A., Ribeiro,S.G., Tanno,P.I., Freitas,D.M.T.A.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_040541
ATGGATTTTCTTTTGCAATTATTGCCGTTCTATCGCTATAAATCTTTACTCAGTGCTGTTGCCTTTGAGATGGAGAAGGGACCTGGTCCAGAGGTGTTTTCGCCCCCAGTGGTTGAGGTGCCTTTCTCCGAAACTCCCAGTGCTGGCTCGGACCAGACCTGGCGAACCTTGGTTCTTGTCTTCCTGTTCGTGGCTCTTAGTATCGGTATTGTTGCAGCTCTCTACTGGGTCTGTGTGCGTGACTGTGTGTTATCGGCTCGTGCGAAACGGGCCAGGACAATAACCGAGTTCGGTTTCGGCAACACTCCGGGTGATCGGAGGGCTCCTCCTCCGCAGGCCCTTGCAGCTGGTGGCCCTGTCTGATGCGTCCAATGACGGGAAAGAGGAAGAGGACCGCTGGTAGTTCTTCGGTAAATCGTCGGAAGTCCCGCCGTGTTTTACCTAGGACTGTGGCTCCGTATTCCCAGCTACCTTCCAGGCTTCCGAGCCTCCAGGTGCAAACATTTGCTTCGCAGGGTTCTGCCGTGGTGGAAGTTAAGAAGGGTGGTAATTGTCTGATGGTTACCTCCTACAGCCGTGGCTCTGACGAGAGTCAGAGACACACCAATGAGACCATGACCTACAAGATGTCGTTGGACCACGTCATGGTGTTACGTGCGGAGCTCTGTAAGTATAGCTTCAAGGCTACCCACTGTGGTTGGGTTGTGTATGACGCTAAACCCACGGGCAACCAGGTTACGTGCAAGACTATATTCGGCTACCCGGACGGGCTTGTGGATTACCCCACGACCTGGAAGGTTGCACGTGACGTGGCTCATCGCTTCGTGGTGAAGAAACGTTGGACCTACCGGATGGAATCCAATGGGTCTAACTCGTCTAAGGATTGGAGTAATGGGACTGGTATACCTCCTTGCAACCGGTCGGTGTACGTCAAGCAGTTCGTGAGCAAGCTCAACTGCCGAACGGAGTGGAAGAACACCACCGGGGGTGACTATGGCGATATCAAAGGCGGAGCCCTCTATGTTGTGCTCGCTGCCGGCCAAGGCATGGAGCACATGGCCTATGGTACCACGAGGATGTATTTCAAGAGCATCGGGAACCAGTGATATGTAACACACATATATATGTATTAATAAAGAGTCATGAGATACATCTTTATTCCTTACAAAGACTTAAGTATTAAGAAACTTAAGCTTTTCGGCGAGACGTTGGCGGTAAGTGGTCGAGTGCCTGAAAAGCGCCTCTCGTCTAAGCTTCTTTCACACAAACCAAACACAATTTAGATTACATGCAGCCGCCGGCCTATTCGGCATAGTTGAAGAATGATTCGCCTGGAGTCATGTGGTACACTACACAATTCTCCAGAAACCAGTCTATCTGACTGGTTGTCATGCTCATGAGCCAGTCCTCGTCCTCGTTCACCAATATAATGGCCGGTATTCCTCCTTTTATTTTTCTTTTTTTACCGTATTTAGGGTTGACGGTGTAATCATGCTGGCTCCCCACGATCGCCTTCCAGTTCGGGCAGAACTTGAAAGGTATGTCGTCTATGACGACATACGTGGCCTCTTCGCTCCAGGCGAAGTAGTCCACCTGGTGTTGGAAGTAGTTGTGTGGCCCGAGGCTTCTTGCCCATGTTGTCTTGCCCGTCCTCGTTCTTCCGCATATGTAGAGGCTTCGGGGACGTCTTCCTTGCCCTCGTTCCTTGTATGGTCCGCCATCCACGTCAGATCTCCCTTCGGATCGAGTGATCCTGTACATAGGAAGTAAGAGAATTCGCTTACAGTGTACAGGTCGTCCCGCAGCCAGGGCATGATGTTCTCATGGCAGGTGAGATCAATGTTTGACGGGATGGCATTCGTCGTGGGAGCATCTGGAAATAGCTTGGATGCACTGTATTCAAATTGGGCCAGTTTAGTAGCCCATTCAAACGGGAAGGCACCTCTGACCATTGAGAGGTAATCGCTCCTAGAGGTGGCAGAAGACATGATCTGACACATCTTGGCGTCCCGGCTTGGTGCCGAGTCTTGTTTCTTCGGCCTTCCAGCTCCACTGCACTTGAATGCTCCCTTGGATACTTCGTTAATGGTGTTCTTCCGTATGTACGCCAAACAGTCACGGACGTTTCTGCATGCCTGTATGTTAGGGTGAAAGACAACTGCACCAGGAATACTAGTCCCAGTGTAGTCAAAATACGTAGGATCGAAAGTGCTGATTTCGATCCTGGTTTGAATGAGGACGTGGCTGTGTAGCCCACCGTCCTTGTGATTTTCTTGAGCAACGTGTACGTAGAGTGGATCATAAGGGGTAACGAGGTTCCAGAGATGATCACAAAGAAACTCAGGGCCAATAGGACAGCGTGGGTACGTGAGGAAGACATTCTTGGCTCTGAAACGGAAGCTTGTGTGAGACATGGCGTATGGAATGAGGAACGGGTGGTTGTTTTGCAGATAGCTCCTCGAAAGAATTCCTAAGGACTTGGAGAGTGTTTTACTCTTGATACCTGAGCGCACCGTCTTCCGTTAGAATGGCCGGGCTTGGCTTCTATATATGGGCCGAATAAAGGAATTCTGGCGGGACCGGCCGGCCGACCGCGAAAGATGGTGCGCATAATAATATTACGCGCACCATCTGGAGCTGAGTAGGCGCCGATAGGGAGAGCCCGGGGCCGAGCGTAGCGAGTCCCTCGACGACAGCCTACGAAGCGACCGCTAGCCGTGTCGGCGGTGGTTCATGGGTTGCTGTA

Gene Information

NCBI Accession YP_009551895.1
Location 1-363
Protein Name movement protein
Coding Region ATGGATTTTCTTTTGCAATTATTGCCGTTCTATCGCTATAAATCTTTACTCAGTGCTGTTGCCTTTGAGATGGAGAAGGGACCTGGTCCAGAGGTGTTTTCGCCCCCAGTGGTTGAGGTGCCTTTCTCCGAAACTCCCAGTGCTGGCTCGGACCAGACCTGGCGAACCTTGGTTCTTGTCTTCCTGTTCGTGGCTCTTAGTATCGGTATTGTTGCAGCTCTCTACTGGGTCTGTGTGCGTGACTGTGTGTTATCGGCTCGTGCGAAACGGGCCAGGACAATAACCGAGTTCGGTTTCGGCAACACTCCGGGTGATCGGAGGGCTCCTCCTCCGCAGGCCCTTGCAGCTGGTGGCCCTGTCTGA
Protein Sequence MDFLLQLLPFYRYKSLLSAVAFEMEKGPGPEVFSPPVVEVPFSETPSAGSDQTWRTLVLVFLFVALSIGIVAALYWVCVRDCVLSARAKRARTITEFGFGNTPGDRRAPPPQALAAGGPV

NCBI Accession YP_009551896.1
Location 363-1106
Protein Name capsid protein
Coding Region ATGCGTCCAATGACGGGAAAGAGGAAGAGGACCGCTGGTAGTTCTTCGGTAAATCGTCGGAAGTCCCGCCGTGTTTTACCTAGGACTGTGGCTCCGTATTCCCAGCTACCTTCCAGGCTTCCGAGCCTCCAGGTGCAAACATTTGCTTCGCAGGGTTCTGCCGTGGTGGAAGTTAAGAAGGGTGGTAATTGTCTGATGGTTACCTCCTACAGCCGTGGCTCTGACGAGAGTCAGAGACACACCAATGAGACCATGACCTACAAGATGTCGTTGGACCACGTCATGGTGTTACGTGCGGAGCTCTGTAAGTATAGCTTCAAGGCTACCCACTGTGGTTGGGTTGTGTATGACGCTAAACCCACGGGCAACCAGGTTACGTGCAAGACTATATTCGGCTACCCGGACGGGCTTGTGGATTACCCCACGACCTGGAAGGTTGCACGTGACGTGGCTCATCGCTTCGTGGTGAAGAAACGTTGGACCTACCGGATGGAATCCAATGGGTCTAACTCGTCTAAGGATTGGAGTAATGGGACTGGTATACCTCCTTGCAACCGGTCGGTGTACGTCAAGCAGTTCGTGAGCAAGCTCAACTGCCGAACGGAGTGGAAGAACACCACCGGGGGTGACTATGGCGATATCAAAGGCGGAGCCCTCTATGTTGTGCTCGCTGCCGGCCAAGGCATGGAGCACATGGCCTATGGTACCACGAGGATGTATTTCAAGAGCATCGGGAACCAGTGA
Protein Sequence MRPMTGKRKRTAGSSSVNRRKSRRVLPRTVAPYSQLPSRLPSLQVQTFASQGSAVVEVKKGGNCLMVTSYSRGSDESQRHTNETMTYKMSLDHVMVLRAELCKYSFKATHCGWVVYDAKPTGNQVTCKTIFGYPDGLVDYPTTWKVARDVAHRFVVKKRWTYRMESNGSNSSKDWSNGTGIPPCNRSVYVKQFVSKLNCRTEWKNTTGGDYGDIKGGALYVVLAAGQGMEHMAYGTTRMYFKSIGNQ

NCBI Accession YP_009551897.1
Location 1303-1704,1785-2414
Protein Name replication-associated protein
Coding Region ATGTCTCACACAAGCTTCCGTTTCAGAGCCAAGAATGTCTTCCTCACGTACCCACGCTGTCCTATTGGCCCTGAGTTTCTTTGTGATCATCTCTGGAACCTCGTTACCCCTTATGATCCACTCTACGTACACGTTGCTCAAGAAAATCACAAGGACGGTGGGCTACACAGCCACGTCCTCATTCAAACCAGGATCGAAATCAGCACTTTCGATCCTACGTATTTTGACTACACTGGGACTAGTATTCCTGGTGCAGTTGTCTTTCACCCTAACATACAGGCATGCAGAAACGTCCGTGACTGTTTGGCGTACATACGGAAGAACACCATTAACGAAGTATCCAAGGGAGCATTCAAGTGCAGTGGAGCTGGAAGGCCGAAGAAACAAGACTCGGCACCAAGCCGGGACGCCAAGATGTGTCAGATCATGTCTTCTGCCACCTCTAGGAGCGATTACCTCTCAATGGTCAGAGGTGCCTTCCCGTTTGAATGGGCTACTAAACTGGCCCAATTTGAATACAGTGCATCCAAGCTATTTCCAGATGCTCCCACGACGAATGCCATCCCGTCAAACATTGATCTCACCTGCCATGAGAACATCATGCCCTGGCTGCGGGACGACCTGTACACTGAACGAGGGCAAGGAAGACGTCCCCGAAGCCTCTACATATGCGGAAGAACGAGGACGGGCAAGACAACATGGGCAAGAAGCCTCGGGCCACACAACTACTTCCAACACCAGGTGGACTACTTCGCCTGGAGCGAAGAGGCCACGTATGTCGTCATAGACGACATACCTTTCAAGTTCTGCCCGAACTGGAAGGCGATCGTGGGGAGCCAGCATGATTACACCGTCAACCCTAAATACGGTAAAAAAAGAAAAATAAAAGGAGGAATACCGGCCATTATATTGGTGAACGAGGACGAGGACTGGCTCATGAGCATGACAACCAGTCAGATAGACTGGTTTCTGGAGAATTGTGTAGTGTACCACATGACTCCAGGCGAATCATTCTTCAACTATGCCGAATAG
Protein Sequence MSHTSFRFRAKNVFLTYPRCPIGPEFLCDHLWNLVTPYDPLYVHVAQENHKDGGLHSHVLIQTRIEISTFDPTYFDYTGTSIPGAVVFHPNIQACRNVRDCLAYIRKNTINEVSKGAFKCSGAGRPKKQDSAPSRDAKMCQIMSSATSRSDYLSMVRGAFPFEWATKLAQFEYSASKLFPDAPTTNAIPSNIDLTCHENIMPWLRDDLYTERGQGRRPRSLYICGRTRTGKTTWARSLGPHNYFQHQVDYFAWSEEATYVVIDDIPFKFCPNWKAIVGSQHDYTVNPKYGKKRKIKGGIPAIILVNEDEDWLMSMTTSQIDWFLENCVVYHMTPGESFFNYAE

NCBI Accession YP_009551898.1
Location 1548-2414
Protein Name RepA
Coding Region ATGTCTCACACAAGCTTCCGTTTCAGAGCCAAGAATGTCTTCCTCACGTACCCACGCTGTCCTATTGGCCCTGAGTTTCTTTGTGATCATCTCTGGAACCTCGTTACCCCTTATGATCCACTCTACGTACACGTTGCTCAAGAAAATCACAAGGACGGTGGGCTACACAGCCACGTCCTCATTCAAACCAGGATCGAAATCAGCACTTTCGATCCTACGTATTTTGACTACACTGGGACTAGTATTCCTGGTGCAGTTGTCTTTCACCCTAACATACAGGCATGCAGAAACGTCCGTGACTGTTTGGCGTACATACGGAAGAACACCATTAACGAAGTATCCAAGGGAGCATTCAAGTGCAGTGGAGCTGGAAGGCCGAAGAAACAAGACTCGGCACCAAGCCGGGACGCCAAGATGTGTCAGATCATGTCTTCTGCCACCTCTAGGAGCGATTACCTCTCAATGGTCAGAGGTGCCTTCCCGTTTGAATGGGCTACTAAACTGGCCCAATTTGAATACAGTGCATCCAAGCTATTTCCAGATGCTCCCACGACGAATGCCATCCCGTCAAACATTGATCTCACCTGCCATGAGAACATCATGCCCTGGCTGCGGGACGACCTGTACACTGTAAGCGAATTCTCTTACTTCCTATGTACAGGATCACTCGATCCGAAGGGAGATCTGACGTGGATGGCGGACCATACAAGGAACGAGGGCAAGGAAGACGTCCCCGAAGCCTCTACATATGCGGAAGAACGAGGACGGGCAAGACAACATGGGCAAGAAGCCTCGGGCCACACAACTACTTCCAACACCAGGTGGACTACTTCGCCTGGAGCGAAGAGGCCACGTATGTCGTCATAG
Protein Sequence MSHTSFRFRAKNVFLTYPRCPIGPEFLCDHLWNLVTPYDPLYVHVAQENHKDGGLHSHVLIQTRIEISTFDPTYFDYTGTSIPGAVVFHPNIQACRNVRDCLAYIRKNTINEVSKGAFKCSGAGRPKKQDSAPSRDAKMCQIMSSATSRSDYLSMVRGAFPFEWATKLAQFEYSASKLFPDAPTTNAIPSNIDLTCHENIMPWLRDDLYTVSEFSYFLCTGSLDPKGDLTWMADHTRNEGKEDVPEASTYAEERGRARQHGQEASGHTTTSNTRWTTSPGAKRPRMSS