Maize streak Reunion virus


Basic Information

Genus Mastrevirus
NCBI Assembly GCF_000894615.1
Isolate Reunion
Release date 2015/2/22
Submitter Pande,D., Kraberger,S., Lefeuvre,P., Lett,J.M., Shepherd,D.N., Varsani,A., Martin,D.P., Lett,J.-M.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_017917
ATGGAGGCGCCCTCGACGTTGCAGGTATACCCTCAGCCCTTGAGCCTTGTAACCCAGTCTCCGCCGGCACCCACCGCCGGCGATCCGTGGTTCCGTGTCGTCTTTGTGTTGGTTATTGCACTCATCTGCTTAGGTATCGTGTACCTGTCTTATCGGTGGTTCATCAGAGATGTCATCATACTGCTTAGGGCGAAGAGACAGCGGAGCACGGAATATATTGGTTTCGGCAATACTCCAGCTAGGGCCGACGGTGGATTCCCAATCCACGGACGAGGAACTGATAGGCAGGGCCCTGTTCCTCCTGTCTAGGGCAGGGAAGCTCTTAGACGAGCTTCAGGAAGAGCTCTACTACGAGACCGATGGCAGGGAGTTCGCGCAAGAGGACCCGTCGGGGGGACGAGGTGGCCTGGAACTCGAAGAGATCCAGGTTGAGCGCTCAACGGAACCCCTCGAAGAGGGTCCCCAGAAATCCAAGGGTGCGCCCCAGTCTCCAGATCCAGACAATTACCAACGGAAGCTCAAGCATGGTTCCGGTTAAGCAACCGGGGTACTGTGGTCTCCTCGGGACTTATTCCCGAGGCTCTGATGAGAATCAGAGGCACACCAGCGAGACTATGACGTATAAAATAGCGTTAGATCTGCATTTCAGTATTACTTCTGCTGCCGCTGCTTATAGCAATTCAGGTACTGGGGTCTTGTGGCTGATTTACGATTCACAGCCGAACGGAGCTCAGCCTACGTTGAAGGACATCTTCGCTTACGAGGATTCACTGGTAGCGTGGCCATACACCTGGAAGGTCTCAAGAGAGGTCTGTCATCGCTTTGTGGTTAAACGGAGGTACACGTTCACACTCGAGTCAAATGGAAGAAGGAATGATGAGCAGCCGCCATCAAACTCAGTTTGGCCGCCTTGTAAGACTCACCTGTACTTCCACAAGTTCGCTAAGGGTTTGGGCGTGAGGACGGAGTGGAAGAACGATACAGCCGGTAGTGTTGGTAACATCAAGAAAGGAGCACTGTACATAGGTATAGCTCCAGGTAACGGGGTTGAGTTTAATGTGTTTGGCAAGACCCGTCTGTACTTCAAGAGCATTGGAAATCAATAAGAAAGTGTTATTCAAATAACCTGGTACTCCAGGTTATTATGTTCGTGTACAAAACACTGAGTACATAGAGGTCGCTTGCGACCAAAGAAAACACACATGAAGAAGGGCGGACAGGACAAAGCAGGCGGCATACGGGCGCGATAGGGGCAACACACTGAAAAAAAATCACACAATAGTAATGAAATCACTCCCTAAGAGGGAGTGTAGAACTTCTCATGAAGTTCCATCTGATACACAACGCAGTTGTCGTAGAAGTACTCCAGCTGAGCTGGAGTCATCACCTTCAGCCAGTCCTCATCGTAGTTGACGAGAATGATCGAGGGAATGCCTCCCGGTACTTCCATCCTGCGTGCATACTTAGGGTTAACGGTGTAGTCCTTCTGCCCCCCGACCAGCTGCTTCCAGCACGGGCAGAACTTGAAGGGTATGTCGTCCAGAACGTTGTACTTGGCAGACTTCCTGTACTTCAGGAAGTCCACCCCGTTCTGCCAGTAGTTATGGTTCACTGGGTCGATGCTCCGGGCCCAGGTAGTCTTGCCCGTGCGTGTAGGCCCAACGATGTAGAGGCTCCTTGGTCTTGAGGTGCGTGTAGCAGCATCCCCCTGGTGCATTCGTCCATCCACTTCAGGGACTCTGCAGCTTGCTCTACAGATTGACAGTGAGGATGTTCGAGCATGTAGATGTATGGGTGTACCTGAAAGATGTTCTCGTCCTTCCAGGATCGGATGGTCTCGTAGCATGTCAGGTCGGGCTCTGAGGGTGGATGAGGTGGCACGAAAGGTGATGGTAGTGTTGGGAAGAGTCGTTCTGCCGAGTACTCGAACTGTTGCAGTTTAGTAGCCCACTCGAAAGGGAAGGCCTTCTGGACTTCGGACAGGTACTCAGCCTTGCTGGTTGTGGTTTCGATAATGCCACGCATTATCTCGTTACGCTTTGGAACAGGGGTACTCCCGTAACCGGCTCCTGATGTGCCGGCTCTGGGAATGAAAGTACCTCTGGAGTAAACGGTGATCGGACTCTTGAGGATGTACTCTCTAGTCTTGTTAGGACTTCGAGAAGCCTGGATGTTAGGGTGGTAACCCTGAATGTCAAAAAAACCAGGATCCCTAGTAGACATAGGACGAATAGTCTGTAGCAAAACATGAAGATGTGGAGTCCCATCCTGGTGAGACTCAGAAGAAGCAAGAATGTAACTAGGAGTCCAAGGACGTGCGACCTCCCAGAGATGCTGCCCTGCCTCGAACGGGGTGAGGAGGCAGCGGGGGTAAGTGAGGAAGGCATTTGCAGACTTGAACTGGAAATTTCGTCGTGGTGGATCTGGTCCCACAGGGGTGTCGTGCTGGAGGAGGTCATCCTCCTCAGAGGGGTAGTCAGAGCCAGGCAGAGGTGTGGGAACCTCAGCCTGAACGGAGGGCGTAGGCACGAAGTGGTTGCCGAACGCACTCATGCTCTGGGACTTGGTCGCACCACGGGGCAAGGAGGCTGAGAAGATACTCAGCTTCTCAACTCTATCCCTTACCTGCGTTTTTGTTTCCGCCTCACAGCTTCTCAGCAAGCGTACTTATAGTACGCCATGTTGGGCCTTAAGTCCAGGCGCGGCCCAAAAACGCGAAAAATAATATTACGAGCGTTTTAAGGGCCCGCGACTGCGACGGCCACATGGCCCTGTATGTGGACGGAGCGCACTACAGGTAAAGCGGGAGGGAATCCCCCGTGCAATAATTTAGACTTTCCGAGTCATTCTTTATTAAAGGAGAGGTTACCCGTCAGAACGTG

Gene Information

NCBI Accession YP_006331071.1
Location 1-309
Protein Name movement protein
Coding Region ATGGAGGCGCCCTCGACGTTGCAGGTATACCCTCAGCCCTTGAGCCTTGTAACCCAGTCTCCGCCGGCACCCACCGCCGGCGATCCGTGGTTCCGTGTCGTCTTTGTGTTGGTTATTGCACTCATCTGCTTAGGTATCGTGTACCTGTCTTATCGGTGGTTCATCAGAGATGTCATCATACTGCTTAGGGCGAAGAGACAGCGGAGCACGGAATATATTGGTTTCGGCAATACTCCAGCTAGGGCCGACGGTGGATTCCCAATCCACGGACGAGGAACTGATAGGCAGGGCCCTGTTCCTCCTGTCTAG
Protein Sequence MEAPSTLQVYPQPLSLVTQSPPAPTAGDPWFRVVFVLVIALICLGIVYLSYRWFIRDVIILLRAKRQRSTEYIGFGNTPARADGGFPIHGRGTDRQGPVPPV

NCBI Accession YP_006331072.1
Location 360-1106
Protein Name capsid protein
Coding Region ATGGCAGGGAGTTCGCGCAAGAGGACCCGTCGGGGGGACGAGGTGGCCTGGAACTCGAAGAGATCCAGGTTGAGCGCTCAACGGAACCCCTCGAAGAGGGTCCCCAGAAATCCAAGGGTGCGCCCCAGTCTCCAGATCCAGACAATTACCAACGGAAGCTCAAGCATGGTTCCGGTTAAGCAACCGGGGTACTGTGGTCTCCTCGGGACTTATTCCCGAGGCTCTGATGAGAATCAGAGGCACACCAGCGAGACTATGACGTATAAAATAGCGTTAGATCTGCATTTCAGTATTACTTCTGCTGCCGCTGCTTATAGCAATTCAGGTACTGGGGTCTTGTGGCTGATTTACGATTCACAGCCGAACGGAGCTCAGCCTACGTTGAAGGACATCTTCGCTTACGAGGATTCACTGGTAGCGTGGCCATACACCTGGAAGGTCTCAAGAGAGGTCTGTCATCGCTTTGTGGTTAAACGGAGGTACACGTTCACACTCGAGTCAAATGGAAGAAGGAATGATGAGCAGCCGCCATCAAACTCAGTTTGGCCGCCTTGTAAGACTCACCTGTACTTCCACAAGTTCGCTAAGGGTTTGGGCGTGAGGACGGAGTGGAAGAACGATACAGCCGGTAGTGTTGGTAACATCAAGAAAGGAGCACTGTACATAGGTATAGCTCCAGGTAACGGGGTTGAGTTTAATGTGTTTGGCAAGACCCGTCTGTACTTCAAGAGCATTGGAAATCAATAA
Protein Sequence MAGSSRKRTRRGDEVAWNSKRSRLSAQRNPSKRVPRNPRVRPSLQIQTITNGSSSMVPVKQPGYCGLLGTYSRGSDENQRHTSETMTYKIALDLHFSITSAAAAYSNSGTGVLWLIYDSQPNGAQPTLKDIFAYEDSLVAWPYTWKVSREVCHRFVVKRRYTFTLESNGRRNDEQPPSNSVWPPCKTHLYFHKFAKGLGVRTEWKNDTAGSVGNIKKGALYIGIAPGNGVEFNVFGKTRLYFKSIGNQ

NCBI Accession YP_006331073.1
Location 1298-1708,1801-2553
Protein Name replication associated protein
Coding Region ATGAGTGCGTTCGGCAACCACTTCGTGCCTACGCCCTCCGTTCAGGCTGAGGTTCCCACACCTCTGCCTGGCTCTGACTACCCCTCTGAGGAGGATGACCTCCTCCAGCACGACACCCCTGTGGGACCAGATCCACCACGACGAAATTTCCAGTTCAAGTCTGCAAATGCCTTCCTCACTTACCCCCGCTGCCTCCTCACCCCGTTCGAGGCAGGGCAGCATCTCTGGGAGGTCGCACGTCCTTGGACTCCTAGTTACATTCTTGCTTCTTCTGAGTCTCACCAGGATGGGACTCCACATCTTCATGTTTTGCTACAGACTATTCGTCCTATGTCTACTAGGGATCCTGGTTTTTTTGACATTCAGGGTTACCACCCTAACATCCAGGCTTCTCGAAGTCCTAACAAGACTAGAGAGTACATCCTCAAGAGTCCGATCACCGTTTACTCCAGAGGTACTTTCATTCCCAGAGCCGGCACATCAGGAGCCGGTTACGGGAGTACCCCTGTTCCAAAGCGTAACGAGATAATGCGTGGCATTATCGAAACCACAACCAGCAAGGCTGAGTACCTGTCCGAAGTCCAGAAGGCCTTCCCTTTCGAGTGGGCTACTAAACTGCAACAGTTCGAGTACTCGGCAGAACGACTCTTCCCAACACTACCATCACCTTTCGTGCCACCTCATCCACCCTCAGAGCCCGACCTGACATGCTACGAGACCATCCGATCCTGGAAGGACGAGAACATCTTTCAGGGGGATGCTGCTACACGCACCTCAAGACCAAGGAGCCTCTACATCGTTGGGCCTACACGCACGGGCAAGACTACCTGGGCCCGGAGCATCGACCCAGTGAACCATAACTACTGGCAGAACGGGGTGGACTTCCTGAAGTACAGGAAGTCTGCCAAGTACAACGTTCTGGACGACATACCCTTCAAGTTCTGCCCGTGCTGGAAGCAGCTGGTCGGGGGGCAGAAGGACTACACCGTTAACCCTAAGTATGCACGCAGGATGGAAGTACCGGGAGGCATTCCCTCGATCATTCTCGTCAACTACGATGAGGACTGGCTGAAGGTGATGACTCCAGCTCAGCTGGAGTACTTCTACGACAACTGCGTTGTGTATCAGATGGAACTTCATGAGAAGTTCTACACTCCCTCTTAG
Protein Sequence MSAFGNHFVPTPSVQAEVPTPLPGSDYPSEEDDLLQHDTPVGPDPPRRNFQFKSANAFLTYPRCLLTPFEAGQHLWEVARPWTPSYILASSESHQDGTPHLHVLLQTIRPMSTRDPGFFDIQGYHPNIQASRSPNKTREYILKSPITVYSRGTFIPRAGTSGAGYGSTPVPKRNEIMRGIIETTTSKAEYLSEVQKAFPFEWATKLQQFEYSAERLFPTLPSPFVPPHPPSEPDLTCYETIRSWKDENIFQGDAATRTSRPRSLYIVGPTRTGKTTWARSIDPVNHNYWQNGVDFLKYRKSAKYNVLDDIPFKFCPCWKQLVGGQKDYTVNPKYARRMEVPGGIPSIILVNYDEDWLKVMTPAQLEYFYDNCVVYQMELHEKFYTPS

NCBI Accession YP_006331074.1
Location 1609-2553
Protein Name RepA
Coding Region ATGAGTGCGTTCGGCAACCACTTCGTGCCTACGCCCTCCGTTCAGGCTGAGGTTCCCACACCTCTGCCTGGCTCTGACTACCCCTCTGAGGAGGATGACCTCCTCCAGCACGACACCCCTGTGGGACCAGATCCACCACGACGAAATTTCCAGTTCAAGTCTGCAAATGCCTTCCTCACTTACCCCCGCTGCCTCCTCACCCCGTTCGAGGCAGGGCAGCATCTCTGGGAGGTCGCACGTCCTTGGACTCCTAGTTACATTCTTGCTTCTTCTGAGTCTCACCAGGATGGGACTCCACATCTTCATGTTTTGCTACAGACTATTCGTCCTATGTCTACTAGGGATCCTGGTTTTTTTGACATTCAGGGTTACCACCCTAACATCCAGGCTTCTCGAAGTCCTAACAAGACTAGAGAGTACATCCTCAAGAGTCCGATCACCGTTTACTCCAGAGGTACTTTCATTCCCAGAGCCGGCACATCAGGAGCCGGTTACGGGAGTACCCCTGTTCCAAAGCGTAACGAGATAATGCGTGGCATTATCGAAACCACAACCAGCAAGGCTGAGTACCTGTCCGAAGTCCAGAAGGCCTTCCCTTTCGAGTGGGCTACTAAACTGCAACAGTTCGAGTACTCGGCAGAACGACTCTTCCCAACACTACCATCACCTTTCGTGCCACCTCATCCACCCTCAGAGCCCGACCTGACATGCTACGAGACCATCCGATCCTGGAAGGACGAGAACATCTTTCAGGTACACCCATACATCTACATGCTCGAACATCCTCACTGTCAATCTGTAGAGCAAGCTGCAGAGTCCCTGAAGTGGATGGACGAATGCACCAGGGGGATGCTGCTACACGCACCTCAAGACCAAGGAGCCTCTACATCGTTGGGCCTACACGCACGGGCAAGACTACCTGGGCCCGGAGCATCGACCCAGTGA
Protein Sequence MSAFGNHFVPTPSVQAEVPTPLPGSDYPSEEDDLLQHDTPVGPDPPRRNFQFKSANAFLTYPRCLLTPFEAGQHLWEVARPWTPSYILASSESHQDGTPHLHVLLQTIRPMSTRDPGFFDIQGYHPNIQASRSPNKTREYILKSPITVYSRGTFIPRAGTSGAGYGSTPVPKRNEIMRGIIETTTSKAEYLSEVQKAFPFEWATKLQQFEYSAERLFPTLPSPFVPPHPPSEPDLTCYETIRSWKDENIFQVHPYIYMLEHPHCQSVEQAAESLKWMDECTRGMLLHAPQDQGASTSLGLHARARLPGPGASTQ