Maize streak dwarfing virus


Basic Information

Genus Mastrevirus
NCBI Assembly GCF_013088405.1
Isolate Ethiopia: Adama Zuria
Release date 2021/6/1
Submitter Guadie,D., Tesfaye,K., Knierim,D., Winter,S., Abraham,A.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055519
GCAGCGATTTTGGGGCCCAGGAAAGCGACGGCCACCATGTGCGCTCTATGGTGGACGGAGCGGCCCACATCTAAAGTGGACAGCAATTATTAAAGGCATTTAAATGGAATCCGTCTCACTCAGGTCTTTAAAGACTTACTTGCACTCGAAGTTTTCGATGGGGCCGGCCTCGACATATCAGGTATTCACCACCTACCCAGATCTAGGTTACCAATCGCCTCCTGCTCCGACCACGGAAGGAGAGGAGCCGTGGTTCCGTGTCGTATTTGTTCTCGTTACAGCACTCGTGGTGATAGGTATTATTTACCTATCTTATCGGTGGTTCATCAGAGATGTCATCATTCTACTTAGGGCGAAACGACAGCGGAGCACGGAAGAGATTGGTTTCGGCAATACTCCAGTTAGGGCCGACCGTGGACGTAGCGGCGCTACCGAACCGGGAACTGGTCCAACGGCTCTTGGACATCTTGTCTAAGGGGATACGTCTTGTTGAACAATTCGTCGACGTTGATGACGACGACGACGGGGAAGAGGAAGAGATCCAGTCGGGCGGACGAGGTGGCCTGGAACAAGAGATCCAGGTCGACCGCTTCGAGAAGCTTGAAATTGAATCTGAACCGGAGGGTAAGAGTACGACCAAGTCTTCAGATCCAGACTCTCGTTGCGACGGGGGCTTCGGAGATAGGCGTCCGAAAAGGAGGTACGATATCACTACTCGGCAGTTACAGCCGAGGTTCTGACGAGAGTCAGAGGCATACCAGTGAGACTATGACGTACAAGGTCGCTATGAATTACTATATATATGTGCCTGCGGAAGCATGCAAGTATTCGAACAAGGGGCTTTGCTGTATATGGTTGATATACGATGCGCAGCCGAACGGAGCTCAGCCGGCCATCAAGGACATCTTTGCACCGGAGAGCACTCTGGTGGACTGGCCGCATACTTGGGCGGTCTCAAGGGAGGTGTGTCATCGATTCGTTATTAAACGTCGGTACACGTTTACCCTCGAGACCAACGGTAGGATTGGCAGTGATGTTGTGCCTGCGAATACGGCGTGGTATCCATGTAATAAGTCGATTAATTTCACGAAGTTTGCGAAGGGACTCGGTGTTAAAACTGAGTGGAAGAACGACGCAAACGGTGATGTTGGAAGTATAAAGAAGGGTGCTCTGTACATCGCGTTTGCGAGTGGTAACGGGGTTATCTTCAATGTAATGGGAAGGACCCGTTTGTACTTCAAATCTGTTGGAAATCAATAAAGCCTTTATTTTATTTATGATGTTGTACATCATGGTGGTGCCGTAGGCACGATACATAGACCTCGGTTGTCGAGGAAATTACACACAATACAGGGCGGCGGGGAAAAAACGGTGGCGGCTAAGGGCGTTGCAGGGGGCATGACATCGAAAAAAAACACACTATATGAATTACATAACTCCCTAAGAGGGAGTGTAGAACTTCTCATGAAGTTCCATCTGATACACAACGCAGTTGTCGTAGAAGTAGTCCAGCTGCGCTGGAGTCATCACCTTCAACCAATCTTCGTCGTAATTGACTAGAATGATGGAAGGGATACCTCCCTTTATTTGTGTCTTCCTTGCGTACTTCGGGTTGACGGTGTAGTCCTTCTGGCCACCTACTAGCTGCTTCCAACACGGACAGAACTTGAACGGTATATCGTCGAGGACGTTGTAACGTGCCTCGTTGTTGTACCGTAGGAAGTCTATTGTAAATTGCCAGTAGTTGTGTCTAAGAGGCTCGATGCTGCGAGCCCAAGTTGTCTTTCCTGTTCGTGTTGGGCCGACGATATATAGGCTCCTGGGTCGATGCTGCCTTGCGCTAGCATCTCCCTGGTGGTGTCATGCATCCATTTAAGAGTTTCAGCAGCTTGCTCGATGTTAGGACAGTCAGAATGTTCAAGCATGTATATCATAGGGTGTACCTGGAAAAGGTTTTCGGACTGCCATTCCTCAATCCTCTCGTGACACATGAGATCAGGTGGTGATGGTATCGAAGGTGGTATGAAGGGTGATGCAGCTGTTGGAAACAACCTTTCGGCTGAGTATTCAAAGTGATGCAGTTTGGTGGCCCACTCGAATGGAAATGCAGTTTGGATAGCAGAGAGGTATTCACTCTTCGTGGTAGAAGAGTTCATGATCTCTTTCATGCGTTGATCTCGGGTTGCAGGACGGGTATTCCCAGCGCTGGACCCTGGGTCCATTCCTCCACGAGGAATGAATGTACCTCTCTCGAAAGTGGAAATCGGATTCTTGAGGATATAGTCTCGAGTTCTGTTTGAACTGCGAGCAGCTTTGATGTTAGGATGATACATCTGCATGTCAAAAAACAGAGGATCCCTAGTTGTAATAGGACGAATGCTCTGTAAAAGAGCGTGAAGGTGAGGGGTCCCATCTTGGTGAAGCTCAGCAGAAACACAAATGTAAGCAGGAGTCCATGGGCGTGCGAGATCCCAGAGATGTTCACCTGCCTCCTGGGGGGTGAGGTTGCAGCGTGAATAGGTGAGGAAAACATTCGCGCACTTGAAGGCGAACCTTCGGAGCGGCTGGGTTGGGTCGACGGTGGTACTTGGTTGGAAGACCACGTCTTCCGTGGTTGGCTGCTGGGTGGTGGGTGGTGTAGCCACGGTAATGCTTTCCGCACTCATGCTCTGGGACTTAGTCGCACACGGAACTGAGTGCGGGGAGTCTAACCAGACTCCCAAACTATATTGCTAGAGCGATTTTGCTTCTCCCTCTTCGTTGAGGACCTCTCGTTATATAATAACAAGCTGGGCCTTAAAGGAGGTTTCCTGGGCCAGGCCAAAATCGCGAAAATAACATT

Gene Information

NCBI Accession YP_010087226.1
Location 158-475
Protein Name movement protein
Coding Region ATGGGGCCGGCCTCGACATATCAGGTATTCACCACCTACCCAGATCTAGGTTACCAATCGCCTCCTGCTCCGACCACGGAAGGAGAGGAGCCGTGGTTCCGTGTCGTATTTGTTCTCGTTACAGCACTCGTGGTGATAGGTATTATTTACCTATCTTATCGGTGGTTCATCAGAGATGTCATCATTCTACTTAGGGCGAAACGACAGCGGAGCACGGAAGAGATTGGTTTCGGCAATACTCCAGTTAGGGCCGACCGTGGACGTAGCGGCGCTACCGAACCGGGAACTGGTCCAACGGCTCTTGGACATCTTGTCTAA
Protein Sequence MGPASTYQVFTTYPDLGYQSPPAPTTEGEEPWFRVVFVLVTALVVIGIIYLSYRWFIRDVIILLRAKRQRSTEEIGFGNTPVRADRGRSGATEPGTGPTALGHLV

NCBI Accession YP_010087227.1
Location 511-1260
Protein Name coat protein
Coding Region ATGACGACGACGACGGGGAAGAGGAAGAGATCCAGTCGGGCGGACGAGGTGGCCTGGAACAAGAGATCCAGGTCGACCGCTTCGAGAAGCTTGAAATTGAATCTGAACCGGAGGGTAAGAGTACGACCAAGTCTTCAGATCCAGACTCTCGTTGCGACGGGGGCTTCGGAGATAGGCGTCCGAAAAGGAGGTACGATATCACTACTCGGCAGTTACAGCCGAGGTTCTGACGAGAGTCAGAGGCATACCAGTGAGACTATGACGTACAAGGTCGCTATGAATTACTATATATATGTGCCTGCGGAAGCATGCAAGTATTCGAACAAGGGGCTTTGCTGTATATGGTTGATATACGATGCGCAGCCGAACGGAGCTCAGCCGGCCATCAAGGACATCTTTGCACCGGAGAGCACTCTGGTGGACTGGCCGCATACTTGGGCGGTCTCAAGGGAGGTGTGTCATCGATTCGTTATTAAACGTCGGTACACGTTTACCCTCGAGACCAACGGTAGGATTGGCAGTGATGTTGTGCCTGCGAATACGGCGTGGTATCCATGTAATAAGTCGATTAATTTCACGAAGTTTGCGAAGGGACTCGGTGTTAAAACTGAGTGGAAGAACGACGCAAACGGTGATGTTGGAAGTATAAAGAAGGGTGCTCTGTACATCGCGTTTGCGAGTGGTAACGGGGTTATCTTCAATGTAATGGGAAGGACCCGTTTGTACTTCAAATCTGTTGGAAATCAATAA
Protein Sequence MTTTTGKRKRSSRADEVAWNKRSRSTASRSLKLNLNRRVRVRPSLQIQTLVATGASEIGVRKGGTISLLGSYSRGSDESQRHTSETMTYKVAMNYYIYVPAEACKYSNKGLCCIWLIYDAQPNGAQPAIKDIFAPESTLVDWPHTWAVSREVCHRFVIKRRYTFTLETNGRIGSDVVPANTAWYPCNKSINFTKFAKGLGVKTEWKNDANGDVGSIKKGALYIAFASGNGVIFNVMGRTRLYFKSVGNQ

NCBI Accession YP_010087228.1
Location 1441-1851,1944-2666
Protein Name replication-associated protein
Coding Region ATGAGTGCGGAAAGCATTACCGTGGCTACACCACCCACCACCCAGCAGCCAACCACGGAAGACGTGGTCTTCCAACCAAGTACCACCGTCGACCCAACCCAGCCGCTCCGAAGGTTCGCCTTCAAGTGCGCGAATGTTTTCCTCACCTATTCACGCTGCAACCTCACCCCCCAGGAGGCAGGTGAACATCTCTGGGATCTCGCACGCCCATGGACTCCTGCTTACATTTGTGTTTCTGCTGAGCTTCACCAAGATGGGACCCCTCACCTTCACGCTCTTTTACAGAGCATTCGTCCTATTACAACTAGGGATCCTCTGTTTTTTGACATGCAGATGTATCATCCTAACATCAAAGCTGCTCGCAGTTCAAACAGAACTCGAGACTATATCCTCAAGAATCCGATTTCCACTTTCGAGAGAGGTACATTCATTCCTCGTGGAGGAATGGACCCAGGGTCCAGCGCTGGGAATACCCGTCCTGCAACCCGAGATCAACGCATGAAAGAGATCATGAACTCTTCTACCACGAAGAGTGAATACCTCTCTGCTATCCAAACTGCATTTCCATTCGAGTGGGCCACCAAACTGCATCACTTTGAATACTCAGCCGAAAGGTTGTTTCCAACAGCTGCATCACCCTTCATACCACCTTCGATACCATCACCACCTGATCTCATGTGTCACGAGAGGATTGAGGAATGGCAGTCCGAAAACCTTTTCCAGGGAGATGCTAGCGCAAGGCAGCATCGACCCAGGAGCCTATATATCGTCGGCCCAACACGAACAGGAAAGACAACTTGGGCTCGCAGCATCGAGCCTCTTAGACACAACTACTGGCAATTTACAATAGACTTCCTACGGTACAACAACGAGGCACGTTACAACGTCCTCGACGATATACCGTTCAAGTTCTGTCCGTGTTGGAAGCAGCTAGTAGGTGGCCAGAAGGACTACACCGTCAACCCGAAGTACGCAAGGAAGACACAAATAAAGGGAGGTATCCCTTCCATCATTCTAGTCAATTACGACGAAGATTGGTTGAAGGTGATGACTCCAGCGCAGCTGGACTACTTCTACGACAACTGCGTTGTGTATCAGATGGAACTTCATGAGAAGTTCTACACTCCCTCTTAG
Protein Sequence MSAESITVATPPTTQQPTTEDVVFQPSTTVDPTQPLRRFAFKCANVFLTYSRCNLTPQEAGEHLWDLARPWTPAYICVSAELHQDGTPHLHALLQSIRPITTRDPLFFDMQMYHPNIKAARSSNRTRDYILKNPISTFERGTFIPRGGMDPGSSAGNTRPATRDQRMKEIMNSSTTKSEYLSAIQTAFPFEWATKLHHFEYSAERLFPTAASPFIPPSIPSPPDLMCHERIEEWQSENLFQGDASARQHRPRSLYIVGPTRTGKTTWARSIEPLRHNYWQFTIDFLRYNNEARYNVLDDIPFKFCPCWKQLVGGQKDYTVNPKYARKTQIKGGIPSIILVNYDEDWLKVMTPAQLDYFYDNCVVYQMELHEKFYTPS

NCBI Accession YP_010087229.1
Location 1725-2666
Protein Name RepA
Coding Region ATGAGTGCGGAAAGCATTACCGTGGCTACACCACCCACCACCCAGCAGCCAACCACGGAAGACGTGGTCTTCCAACCAAGTACCACCGTCGACCCAACCCAGCCGCTCCGAAGGTTCGCCTTCAAGTGCGCGAATGTTTTCCTCACCTATTCACGCTGCAACCTCACCCCCCAGGAGGCAGGTGAACATCTCTGGGATCTCGCACGCCCATGGACTCCTGCTTACATTTGTGTTTCTGCTGAGCTTCACCAAGATGGGACCCCTCACCTTCACGCTCTTTTACAGAGCATTCGTCCTATTACAACTAGGGATCCTCTGTTTTTTGACATGCAGATGTATCATCCTAACATCAAAGCTGCTCGCAGTTCAAACAGAACTCGAGACTATATCCTCAAGAATCCGATTTCCACTTTCGAGAGAGGTACATTCATTCCTCGTGGAGGAATGGACCCAGGGTCCAGCGCTGGGAATACCCGTCCTGCAACCCGAGATCAACGCATGAAAGAGATCATGAACTCTTCTACCACGAAGAGTGAATACCTCTCTGCTATCCAAACTGCATTTCCATTCGAGTGGGCCACCAAACTGCATCACTTTGAATACTCAGCCGAAAGGTTGTTTCCAACAGCTGCATCACCCTTCATACCACCTTCGATACCATCACCACCTGATCTCATGTGTCACGAGAGGATTGAGGAATGGCAGTCCGAAAACCTTTTCCAGGTACACCCTATGATATACATGCTTGAACATTCTGACTGTCCTAACATCGAGCAAGCTGCTGAAACTCTTAAATGGATGCATGACACCACCAGGGAGATGCTAGCGCAAGGCAGCATCGACCCAGGAGCCTATATATCGTCGGCCCAACACGAACAGGAAAGACAACTTGGGCTCGCAGCATCGAGCCTCTTAGACACAACTACTGGCAATTTACAATAG
Protein Sequence MSAESITVATPPTTQQPTTEDVVFQPSTTVDPTQPLRRFAFKCANVFLTYSRCNLTPQEAGEHLWDLARPWTPAYICVSAELHQDGTPHLHALLQSIRPITTRDPLFFDMQMYHPNIKAARSSNRTRDYILKNPISTFERGTFIPRGGMDPGSSAGNTRPATRDQRMKEIMNSSTTKSEYLSAIQTAFPFEWATKLHHFEYSAERLFPTAASPFIPPSIPSPPDLMCHERIEEWQSENLFQVHPMIYMLEHSDCPNIEQAAETLKWMHDTTREMLAQGSIDPGAYISSAQHEQERQLGLAASSLLDTTTGNLQ