Eragrostis minor streak virus
Basic Information
| Genus |
Mastrevirus
|
| NCBI Assembly |
GCF_000893655.1 |
| Isolate |
Namibia |
| Release date |
2015/2/22 |
| Submitter |
Varsani,A., Linderme,D., Lefeuvre,P., Martin,D.P. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ATGAGTTCTTTAAGTGGCCCTATTCCTATATCTCCTTGTCCTAGCCGTTCGAGCAGTAGCTTCGACGGTGCCCTGCATGCGTTGCTAATAGCCTTTGTTGGCTTGTTATTGCTCATAGGGAGTTGCTGGGCTGCATTTAGTTTGTTCGGCCGGGAGTTGCTTGCCATCAGGGCCAGACAGCCCGTAAGGACGCTGTCGCAGGAAGAAGCCCAGTTGCCAAGGCCCGCTCCGTCCGCTCCTCTCGAGCCTGTTCGTCGAGATGGTTTACGAGCGCAAGCGGAAAGATCCCCGGCGTTCTGATGAGTCCGCTGGCTCTGCCCGCAAGAGGCCTAGGGCCCCTGCTGGACGTTCAATGGTTTCGGCCGTTAGACGGCCGGCTCTTCAGATTCGGGAGTACCCCTGGCAGACCTTGACGCAGTTGCCTATTAAGATCACCGATGGTGTCATTTTCATGGTGAATACCATAGACCCGGGTACCGGGGATGATCAGAGGTCGAAGCACCAGACGATGCTGTACAAGATGAGCTTCAATTGCGTTCTCTGGCCGGACGAGACTACGGCGTTGATTGTTGCCCCTTTCAGGGTTAACTTCTGGTTGGTGTATGATGCTGCGCCGCAGGGGAAACTGCCGGCTCTGTCCGACATCTTCAGCGTGCCCTATACCAAGTGGGGTAATACCTGGAATGTTAGCCGCACTAATGTGCATAGGTTCGTGGTGAAGCGCAAGTGGCATGTGGATTACAACAGTTCTGGTACAGCCGTTGGGAAGAAACAGTCTCCGGGGTCGGAGGATTTCCCCGTGAAGAACGTGGTCGAGTGCAACAAGTTCTTCGAGAAGCTGCGTGTTAAGACCGAGTGGCTTAACACCACCGATGGTACTATCGGGTCTGTTAAAAAGGGTGCTTTGTATTTGGTTGCAAATACCCGTCAGATGCCTGCTGGTGACGCAGTCACCACAACCTGTACTACTTACATGCAAGGTTCTACCCGATTGTACTTCAAGTCGCTGGGTTACCAGTGATAATAAAAAAGTTGTTGTTCAAACCTTGACTTTATTCAATTGAAAATTGATACATGGTGCGCAGTCCGCGCAACGAAAAAAACACACTTAGGTTTGTGTGTCGCGAGGGGGAACCCGGAGCACGCACCCAAACCGTTACAAACATAAAACACACCCAAACTACATTTATTAAACATCCTGGCCGGCTGCTTCTGCCTTGTAGAACTTCGTTCCCTCGTACATGTAATGTACGTGTGAGTTGGCGTGGAGGTACTCCGCCTGAGCAGGCTTCATCTCTCCGAGCCAGTCTTCGTCGTCATTTGTTAAAATGATGGAGGGAATCCCGCCCTTGATTTTCTTCTTCTTGCCGTATTTTGGGTTTACTATGTAGTCGCGTTGGGCACCTACGAGTGCCTTCCACTGTGGACAGTACTTGAAAGGGACGTCGTCGATGACGTTGTACTCCGCTTGAGGGTCGTAGTGTGTGAAGTCTAAGACGGAGTTGTAGTAGTTATGGCGACCTAGGCTTCTAGCCCAAGTCGTCTTTCCAGTACGGGTTGGTCCACAGATGTAGATGCTACGTGGCCTGCCTCCTGGTGCTCCATGCTGATATCCTGCATTTGTTGCAGGTCATCGGCTGCTTGGGAAATTGATGTGCCAGGATGTATTAACGTGTAACTATACGGGGTTACCTGGAACCATTCCGAATTTATGATTTCGGTGATGTCTTCTGGGCACAGAAGTTGGTCTACAGGGAACGGGGAGGTGTACTCTACAGGAGGTTCTGGGAACAGGCTGCTTGCCGAGTACTCGAATTGCATTAGTCTGGTTGCCCAGTCAAATGGAAATTCTTTCCTCACCATTGAGAGGTACTCTTGCTTAGAAGTGGATGACTCTATTATGGCACGCATTCGCTGGTCACGTCCCTCTTGGGCAGTTTTCTTTTTCTTGGGAAGTGTTGGCTTCCCGAAGATGTATTCCTCCCCGTTTTGCTTGGTGATGTACCCTAGCACTTTGGAAGCATCTCTTGCTGGTTGGATGTTGGGATGGAATTTGGTTCCGTGAAGGAACTGGTCGAAGAAGGTTTGTCTACGGGTGAAGAGTTTTTTCTCTAGTTGCACTAGTGCATGGAGATGCGGAAAACCATCCTTGTGCAGTTCTTGGGTTACATGGATGTATTTTGGCTTGTTCTGGATCAGTAGTTGCAACAGCTCGAGACCTAGATCTTTCGGGGAAAGATCGCACCTAGGATAGGTTAGGAAGAGTTGCTTGGAAGAAATTCGGAACCTGGAGCCGTCGGATGAGGATCCAAGGGTGTCTTGGTCCTGAGACATCTTGGTGTCACTGGAACCTGCTCTAGGGGCTCAAAAACTCTCTACTACCTTGCTCGGCGCCGGTGTCACCCCCCGGTGCCCCTCTTTTATATGGGCCGGGCCGGCTTGTTGCGGGGGCGAGCATGATTAATATTACCGCTCGCCCCCACCAGGCCGCTGGTGAGGCCCATTAGGACGGCCCGTCCCCACTCCAAAGGTGACGCCTTTGGGGCAGATCGCACCTTGGGTGCTAGGGTGCACCATCGCTTTGGTGCTTTCGGTGCGGTGCCCTTTGCTTTGTCTATAAGAGGGGAGGCCGCAGTGGCTCTCCCTCACAAAAGCAAAGGTAAGGTTTTATGTTTTGATCCATAGTGCG
Gene Information
|
NCBI Accession
|
YP_004465362.1
|
|
Location
|
1-300 |
|
Protein Name
|
movement protein |
|
Coding Region
|
ATGAGTTCTTTAAGTGGCCCTATTCCTATATCTCCTTGTCCTAGCCGTTCGAGCAGTAGCTTCGACGGTGCCCTGCATGCGTTGCTAATAGCCTTTGTTGGCTTGTTATTGCTCATAGGGAGTTGCTGGGCTGCATTTAGTTTGTTCGGCCGGGAGTTGCTTGCCATCAGGGCCAGACAGCCCGTAAGGACGCTGTCGCAGGAAGAAGCCCAGTTGCCAAGGCCCGCTCCGTCCGCTCCTCTCGAGCCTGTTCGTCGAGATGGTTTACGAGCGCAAGCGGAAAGATCCCCGGCGTTCTGA |
|
Protein Sequence
|
MSSLSGPIPISPCPSRSSSSFDGALHALLIAFVGLLLLIGSCWAAFSLFGRELLAIRARQPVRTLSQEEAQLPRPAPSAPLEPVRRDGLRAQAERSPAF |
|
NCBI Accession
|
YP_004465363.1
|
|
Location
|
260-1021 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGGTTTACGAGCGCAAGCGGAAAGATCCCCGGCGTTCTGATGAGTCCGCTGGCTCTGCCCGCAAGAGGCCTAGGGCCCCTGCTGGACGTTCAATGGTTTCGGCCGTTAGACGGCCGGCTCTTCAGATTCGGGAGTACCCCTGGCAGACCTTGACGCAGTTGCCTATTAAGATCACCGATGGTGTCATTTTCATGGTGAATACCATAGACCCGGGTACCGGGGATGATCAGAGGTCGAAGCACCAGACGATGCTGTACAAGATGAGCTTCAATTGCGTTCTCTGGCCGGACGAGACTACGGCGTTGATTGTTGCCCCTTTCAGGGTTAACTTCTGGTTGGTGTATGATGCTGCGCCGCAGGGGAAACTGCCGGCTCTGTCCGACATCTTCAGCGTGCCCTATACCAAGTGGGGTAATACCTGGAATGTTAGCCGCACTAATGTGCATAGGTTCGTGGTGAAGCGCAAGTGGCATGTGGATTACAACAGTTCTGGTACAGCCGTTGGGAAGAAACAGTCTCCGGGGTCGGAGGATTTCCCCGTGAAGAACGTGGTCGAGTGCAACAAGTTCTTCGAGAAGCTGCGTGTTAAGACCGAGTGGCTTAACACCACCGATGGTACTATCGGGTCTGTTAAAAAGGGTGCTTTGTATTTGGTTGCAAATACCCGTCAGATGCCTGCTGGTGACGCAGTCACCACAACCTGTACTACTTACATGCAAGGTTCTACCCGATTGTACTTCAAGTCGCTGGGTTACCAGTGA |
|
Protein Sequence
|
MVYERKRKDPRRSDESAGSARKRPRAPAGRSMVSAVRRPALQIREYPWQTLTQLPIKITDGVIFMVNTIDPGTGDDQRSKHQTMLYKMSFNCVLWPDETTALIVAPFRVNFWLVYDAAPQGKLPALSDIFSVPYTKWGNTWNVSRTNVHRFVVKRKWHVDYNSSGTAVGKKQSPGSEDFPVKNVVECNKFFEKLRVKTEWLNTTDGTIGSVKKGALYLVANTRQMPAGDAVTTTCTTYMQGSTRLYFKSLGYQ |
|
NCBI Accession
|
YP_004465364.1
|
|
Location
|
1190-1606,1693-2334 |
|
Protein Name
|
replication associated protein |
|
Coding Region
|
ATGTCTCAGGACCAAGACACCCTTGGATCCTCATCCGACGGCTCCAGGTTCCGAATTTCTTCCAAGCAACTCTTCCTAACCTATCCTAGGTGCGATCTTTCCCCGAAAGATCTAGGTCTCGAGCTGTTGCAACTACTGATCCAGAACAAGCCAAAATACATCCATGTAACCCAAGAACTGCACAAGGATGGTTTTCCGCATCTCCATGCACTAGTGCAACTAGAGAAAAAACTCTTCACCCGTAGACAAACCTTCTTCGACCAGTTCCTTCACGGAACCAAATTCCATCCCAACATCCAACCAGCAAGAGATGCTTCCAAAGTGCTAGGGTACATCACCAAGCAAAACGGGGAGGAATACATCTTCGGGAAGCCAACACTTCCCAAGAAAAAGAAAACTGCCCAAGAGGGACGTGACCAGCGAATGCGTGCCATAATAGAGTCATCCACTTCTAAGCAAGAGTACCTCTCAATGGTGAGGAAAGAATTTCCATTTGACTGGGCAACCAGACTAATGCAATTCGAGTACTCGGCAAGCAGCCTGTTCCCAGAACCTCCTGTAGAGTACACCTCCCCGTTCCCTGTAGACCAACTTCTGTGCCCAGAAGACATCACCGAAATCATAAATTCGGAATGGTTCCAGCATGGAGCACCAGGAGGCAGGCCACGTAGCATCTACATCTGTGGACCAACCCGTACTGGAAAGACGACTTGGGCTAGAAGCCTAGGTCGCCATAACTACTACAACTCCGTCTTAGACTTCACACACTACGACCCTCAAGCGGAGTACAACGTCATCGACGACGTCCCTTTCAAGTACTGTCCACAGTGGAAGGCACTCGTAGGTGCCCAACGCGACTACATAGTAAACCCAAAATACGGCAAGAAGAAGAAAATCAAGGGCGGGATTCCCTCCATCATTTTAACAAATGACGACGAAGACTGGCTCGGAGAGATGAAGCCTGCTCAGGCGGAGTACCTCCACGCCAACTCACACGTACATTACATGTACGAGGGAACGAAGTTCTACAAGGCAGAAGCAGCCGGCCAGGATGTTTAA |
|
Protein Sequence
|
MSQDQDTLGSSSDGSRFRISSKQLFLTYPRCDLSPKDLGLELLQLLIQNKPKYIHVTQELHKDGFPHLHALVQLEKKLFTRRQTFFDQFLHGTKFHPNIQPARDASKVLGYITKQNGEEYIFGKPTLPKKKKTAQEGRDQRMRAIIESSTSKQEYLSMVRKEFPFDWATRLMQFEYSASSLFPEPPVEYTSPFPVDQLLCPEDITEIINSEWFQHGAPGGRPRSIYICGPTRTGKTTWARSLGRHNYYNSVLDFTHYDPQAEYNVIDDVPFKYCPQWKALVGAQRDYIVNPKYGKKKKIKGGIPSIILTNDDEDWLGEMKPAQAEYLHANSHVHYMYEGTKFYKAEAAGQDV |
|
NCBI Accession
|
YP_004465365.1
|
|
Location
|
1522-2334 |
|
Protein Name
|
RepA |
|
Coding Region
|
ATGTCTCAGGACCAAGACACCCTTGGATCCTCATCCGACGGCTCCAGGTTCCGAATTTCTTCCAAGCAACTCTTCCTAACCTATCCTAGGTGCGATCTTTCCCCGAAAGATCTAGGTCTCGAGCTGTTGCAACTACTGATCCAGAACAAGCCAAAATACATCCATGTAACCCAAGAACTGCACAAGGATGGTTTTCCGCATCTCCATGCACTAGTGCAACTAGAGAAAAAACTCTTCACCCGTAGACAAACCTTCTTCGACCAGTTCCTTCACGGAACCAAATTCCATCCCAACATCCAACCAGCAAGAGATGCTTCCAAAGTGCTAGGGTACATCACCAAGCAAAACGGGGAGGAATACATCTTCGGGAAGCCAACACTTCCCAAGAAAAAGAAAACTGCCCAAGAGGGACGTGACCAGCGAATGCGTGCCATAATAGAGTCATCCACTTCTAAGCAAGAGTACCTCTCAATGGTGAGGAAAGAATTTCCATTTGACTGGGCAACCAGACTAATGCAATTCGAGTACTCGGCAAGCAGCCTGTTCCCAGAACCTCCTGTAGAGTACACCTCCCCGTTCCCTGTAGACCAACTTCTGTGCCCAGAAGACATCACCGAAATCATAAATTCGGAATGGTTCCAGGTAACCCCGTATAGTTACACGTTAATACATCCTGGCACATCAATTTCCCAAGCAGCCGATGACCTGCAACAAATGCAGGATATCAGCATGGAGCACCAGGAGGCAGGCCACGTAGCATCTACATCTGTGGACCAACCCGTACTGGAAAGACGACTTGGGCTAGAAGCCTAG |
|
Protein Sequence
|
MSQDQDTLGSSSDGSRFRISSKQLFLTYPRCDLSPKDLGLELLQLLIQNKPKYIHVTQELHKDGFPHLHALVQLEKKLFTRRQTFFDQFLHGTKFHPNIQPARDASKVLGYITKQNGEEYIFGKPTLPKKKKTAQEGRDQRMRAIIESSTSKQEYLSMVRKEFPFDWATRLMQFEYSASSLFPEPPVEYTSPFPVDQLLCPEDITEIINSEWFQVTPYSYTLIHPGTSISQAADDLQQMQDISMEHQEAGHVASTSVDQPVLERRLGLEA |