Digitaria didactyla striate mosaic virus


Basic Information

Genus Mastrevirus
NCBI Assembly GCF_000889315.1
Isolate Australia
Release date 2015/2/22
Submitter Briddon,R.W., Martin,D.P., Owor,B.E., Donaldson,L., Markham,P.G., Greber,R.S., Varsani,A., Shepherd,D.N.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_014547
TAATATTACCGCCCCCGGCCCATGGCGAGGGCCCTACGCTCAGCAGGGCCCGAGCGGCTTTACCTGCTTTGGTGTTCTTTAACTTGGATTTTCGCAGTGCGATCTGCCATCTGACCGGTTTTGTCTTTTAAAAGACCGCTCCCCCCCTTTGTTTCGAATGGCGACTCCGACATTTGATAGTGCATATTTTAGATCTGGATCTGTGGTTCAAAACCAAGACGGGACAAGCTTTGCTTTCCCGGTGAAGGTGACTGCCCTTGTCTGCATTTCTTCAATTGTAGCGGCCGCAATACTTGTATTTTTATACAAGACCTGTTTACAAGACTGCATAACGCAGTGGAGGCTTACGACATACGGCAGTCACTTTTCATCTGGTTTTGGAGGTACTCATTTGGTGACCTCAGGCCAGCCTGAGAGTAACCATACTCCCATTGTGAGTTTACCTGATAGATCTGCAGTTTCAGTGCCCCCTGTTTCGTTACCTGTTGGTTTGCAAACATCATGAGCCCTGCAGGCTCATATAAGAGGAAGCGCTCCGCCGCTTCGTCTTCAGCGACGCCAAAACGCCGTCGCGTCTATAAACAAGCAGTGAGTCGTCCTCTCTCAAGGAGAGAACCACTGCAGGTGCAAGATTTTACCTGGGAGCAAGATTCGGCGTTCAATGCAGGTGGCTCCGCCTACCTGCTTACAAGTTATGCCCGCGGTTCAGCTGAGAATCAGCGCAAGACCGCGGAGACGATCACCTACAAGGTGGCTATCAACCTTGGTGTTGCTATTAGTGGCACTATGCAACAATACTGTGTGTCGAGCCGGCCAGTGTGCTGGCTCGTTTACGATGCGGCACCGTCCGGCACGGCTGTGACGGCTCAAGAAATTTTCGGATTCCCTGATGGTTTGAAGAACTGGCCAACAACTTGGAAAGTGGCCAGATCGGTGTCCCACCGATTCATAGTGAAACGTCGGTGGGTGTTTACACTGGAGTCCAACGGCTCCAATTTTGCTACGGGGTACTCTAGTAACCCGTGTGCCATACCGCAATCCCTGCCGGTTCTGAACAAGTTCGCAAAGCAACTTGGCGTGCGGACGGAGTGGAAGAACACCGCAGGGGGAGACTTCGGCGACATTAAGAGCGGCGCTCTTTACTTAGTGTTGGCTCCGGCTAACGGATTAACTTTTGTAGCACGCGGAAATATCCGCATGTATTTTAAATCCGTCGGTAATCAGTGATTACCGTTCATGGTTTATGAATAATAAACACAGTTTGATGACAAGCTTGGCAAATTATTATTAAAATGAGGCATTATGCCGATTACAACATGGTTTTGTGTGTCGGGAGGGGGAACCCGGACCACGCACCCAAAACACTTAAATAAAACACACCCAACATTACATTATTAATATGCCGCCCTAGCGGAGAAGCTATGCTTCGACGTCCGACGAAGGAGGAATGAAAGACTCTCCTGCTTGAAGATAGTAGACCACACAGTTGCCGTGAAACCAGTCGGCTTGTTGAGGCGACATGGTTTGTAGCCAGTCTTCATCCTCGTTCGCGAGGATTATTGAAGGTATCCCATTCGGGATAGTCTTCTTTTTACCGTATTTTGGATTTACGGTTATGTCGAACTGGCTACCAACCAACCCCTTCCAACAAGGAACGAACTTGAACGGAATGTCATCTATGACATTATAGATGGCATTTTTATTCCACTCTGTGAGGAAATCTACAGAGTGTTGCCAGTAGTGGTGAGTTCCAAGACTTCTGGCCCAAGAAGTCTTTCCAGTTCTTGTTGGTCCACAGATATATAAGGATCGTCTTCGATGATGCGGACCTCGTTCCTGGTTACATCAGACATCCATTGGAGGTCAAGCTTTGCTTGTTCCTCCGATACTAATGCATGAACACTGTAAGCAGAGACACTTACAGTGAAGAACTCGGTATCGAGCCACTCTCCAATGACCGGATGGTCAGACATGTCGTTGGAGACGAACTGTGGCTGGTATTGTATCGGAGCTTCGGGGAAGAGCGCTTTGGCGCTGTATTCAAACTGTTGGAGACGGATTGCCCAGTCAAACGGAAATGCTTTCCGTATCATGGACAAATATTCGTCCCTGCTTGTGGCGTTAGCCATGATTTGTTTCATTTTTTTGTCACGGGTAAAGGAAGCTAGCTTCCTTTTCCTCGATGCCTTGGGCTTTACGAAGACCCCGTCTTCGTAGAAATCTGCCGGATTTTTCTGACAGTATTCCAGAGTTTTCTCTGGATTTCTTGCCGCCTGAATGTTAGGATGGAATTCAAAGAAATCAAAGTATTTGGCGGATGTGGTTCGGAAAACTTTGTCAAATTGAAGGAACGCATGTAAATGCGGTTCCCCATCTTGATGTAGCTCTTGAGCGATATACATATACTGTATATTATACCGCTTACAAAGTTTTTTGAGAAACGAACCAGCATCCTTTGGAGGGATTGGGCACCTTGGGTATGTCAGGAAGACATGTTGAGAGCGGACGTTGAAGCTTAGCGGCAGACTTGCCGCACTCTCCGAACTTGGATACTCGCCATAAGAGCGAGGATCGAACATGACTGAGTCACTGACAAGCTGGGACGACATAATAAAAGAGGACGTGGCTGAATGGAGAGCCGTAGGATCGTCTTTGAGATCCGATTTGTGAGTGAAACTCTCTTCCTACCAGTTTGCCAATGCCGAGTGCCAACCTACTCTTTTATAGGCCGCCGCCGCGACATGGGCCGAGGGGCAAACCAA

Gene Information

NCBI Accession YP_003915157.1
Location 158-505
Protein Name movement protein
Coding Region ATGGCGACTCCGACATTTGATAGTGCATATTTTAGATCTGGATCTGTGGTTCAAAACCAAGACGGGACAAGCTTTGCTTTCCCGGTGAAGGTGACTGCCCTTGTCTGCATTTCTTCAATTGTAGCGGCCGCAATACTTGTATTTTTATACAAGACCTGTTTACAAGACTGCATAACGCAGTGGAGGCTTACGACATACGGCAGTCACTTTTCATCTGGTTTTGGAGGTACTCATTTGGTGACCTCAGGCCAGCCTGAGAGTAACCATACTCCCATTGTGAGTTTACCTGATAGATCTGCAGTTTCAGTGCCCCCTGTTTCGTTACCTGTTGGTTTGCAAACATCATGA
Protein Sequence MATPTFDSAYFRSGSVVQNQDGTSFAFPVKVTALVCISSIVAAAILVFLYKTCLQDCITQWRLTTYGSHFSSGFGGTHLVTSGQPESNHTPIVSLPDRSAVSVPPVSLPVGLQTS

NCBI Accession YP_003915158.1
Location 502-1227
Protein Name coat protein
Coding Region ATGAGCCCTGCAGGCTCATATAAGAGGAAGCGCTCCGCCGCTTCGTCTTCAGCGACGCCAAAACGCCGTCGCGTCTATAAACAAGCAGTGAGTCGTCCTCTCTCAAGGAGAGAACCACTGCAGGTGCAAGATTTTACCTGGGAGCAAGATTCGGCGTTCAATGCAGGTGGCTCCGCCTACCTGCTTACAAGTTATGCCCGCGGTTCAGCTGAGAATCAGCGCAAGACCGCGGAGACGATCACCTACAAGGTGGCTATCAACCTTGGTGTTGCTATTAGTGGCACTATGCAACAATACTGTGTGTCGAGCCGGCCAGTGTGCTGGCTCGTTTACGATGCGGCACCGTCCGGCACGGCTGTGACGGCTCAAGAAATTTTCGGATTCCCTGATGGTTTGAAGAACTGGCCAACAACTTGGAAAGTGGCCAGATCGGTGTCCCACCGATTCATAGTGAAACGTCGGTGGGTGTTTACACTGGAGTCCAACGGCTCCAATTTTGCTACGGGGTACTCTAGTAACCCGTGTGCCATACCGCAATCCCTGCCGGTTCTGAACAAGTTCGCAAAGCAACTTGGCGTGCGGACGGAGTGGAAGAACACCGCAGGGGGAGACTTCGGCGACATTAAGAGCGGCGCTCTTTACTTAGTGTTGGCTCCGGCTAACGGATTAACTTTTGTAGCACGCGGAAATATCCGCATGTATTTTAAATCCGTCGGTAATCAGTGA
Protein Sequence MSPAGSYKRKRSAASSSATPKRRRVYKQAVSRPLSRREPLQVQDFTWEQDSAFNAGGSAYLLTSYARGSAENQRKTAETITYKVAINLGVAISGTMQQYCVSSRPVCWLVYDAAPSGTAVTAQEIFGFPDGLKNWPTTWKVARSVSHRFIVKRRWVFTLESNGSNFATGYSSNPCAIPQSLPVLNKFAKQLGVRTEWKNTAGGDFGDIKSGALYLVLAPANGLTFVARGNIRMYFKSVGNQ

NCBI Accession YP_003915159.1
Location 1420-1839,1923-2609
Protein Name replication associated protein
Coding Region ATGTCGTCCCAGCTTGTCAGTGACTCAGTCATGTTCGATCCTCGCTCTTATGGCGAGTATCCAAGTTCGGAGAGTGCGGCAAGTCTGCCGCTAAGCTTCAACGTCCGCTCTCAACATGTCTTCCTGACATACCCAAGGTGCCCAATCCCTCCAAAGGATGCTGGTTCGTTTCTCAAAAAACTTTGTAAGCGGTATAATATACAGTATATGTATATCGCTCAAGAGCTACATCAAGATGGGGAACCGCATTTACATGCGTTCCTTCAATTTGACAAAGTTTTCCGAACCACATCCGCCAAATACTTTGATTTCTTTGAATTCCATCCTAACATTCAGGCGGCAAGAAATCCAGAGAAAACTCTGGAATACTGTCAGAAAAATCCGGCAGATTTCTACGAAGACGGGGTCTTCGTAAAGCCCAAGGCATCGAGGAAAAGGAAGCTAGCTTCCTTTACCCGTGACAAAAAAATGAAACAAATCATGGCTAACGCCACAAGCAGGGACGAATATTTGTCCATGATACGGAAAGCATTTCCGTTTGACTGGGCAATCCGTCTCCAACAGTTTGAATACAGCGCCAAAGCGCTCTTCCCCGAAGCTCCGATACAATACCAGCCACAGTTCGTCTCCAACGACATGTCTGACCATCCGGTCATTGGAGAGTGGCTCGATACCGAGTTCTTCACTCAGGAACGAGGTCCGCATCATCGAAGACGATCCTTATATATCTGTGGACCAACAAGAACTGGAAAGACTTCTTGGGCCAGAAGTCTTGGAACTCACCACTACTGGCAACACTCTGTAGATTTCCTCACAGAGTGGAATAAAAATGCCATCTATAATGTCATAGATGACATTCCGTTCAAGTTCGTTCCTTGTTGGAAGGGGTTGGTTGGTAGCCAGTTCGACATAACCGTAAATCCAAAATACGGTAAAAAGAAGACTATCCCGAATGGGATACCTTCAATAATCCTCGCGAACGAGGATGAAGACTGGCTACAAACCATGTCGCCTCAACAAGCCGACTGGTTTCACGGCAACTGTGTGGTCTACTATCTTCAAGCAGGAGAGTCTTTCATTCCTCCTTCGTCGGACGTCGAAGCATAG
Protein Sequence MSSQLVSDSVMFDPRSYGEYPSSESAASLPLSFNVRSQHVFLTYPRCPIPPKDAGSFLKKLCKRYNIQYMYIAQELHQDGEPHLHAFLQFDKVFRTTSAKYFDFFEFHPNIQAARNPEKTLEYCQKNPADFYEDGVFVKPKASRKRKLASFTRDKKMKQIMANATSRDEYLSMIRKAFPFDWAIRLQQFEYSAKALFPEAPIQYQPQFVSNDMSDHPVIGEWLDTEFFTQERGPHHRRRSLYICGPTRTGKTSWARSLGTHHYWQHSVDFLTEWNKNAIYNVIDDIPFKFVPCWKGLVGSQFDITVNPKYGKKKTIPNGIPSIILANEDEDWLQTMSPQQADWFHGNCVVYYLQAGESFIPPSSDVEA

NCBI Accession YP_003915160.1
Location 1722-2609
Protein Name RepA
Coding Region ATGTCGTCCCAGCTTGTCAGTGACTCAGTCATGTTCGATCCTCGCTCTTATGGCGAGTATCCAAGTTCGGAGAGTGCGGCAAGTCTGCCGCTAAGCTTCAACGTCCGCTCTCAACATGTCTTCCTGACATACCCAAGGTGCCCAATCCCTCCAAAGGATGCTGGTTCGTTTCTCAAAAAACTTTGTAAGCGGTATAATATACAGTATATGTATATCGCTCAAGAGCTACATCAAGATGGGGAACCGCATTTACATGCGTTCCTTCAATTTGACAAAGTTTTCCGAACCACATCCGCCAAATACTTTGATTTCTTTGAATTCCATCCTAACATTCAGGCGGCAAGAAATCCAGAGAAAACTCTGGAATACTGTCAGAAAAATCCGGCAGATTTCTACGAAGACGGGGTCTTCGTAAAGCCCAAGGCATCGAGGAAAAGGAAGCTAGCTTCCTTTACCCGTGACAAAAAAATGAAACAAATCATGGCTAACGCCACAAGCAGGGACGAATATTTGTCCATGATACGGAAAGCATTTCCGTTTGACTGGGCAATCCGTCTCCAACAGTTTGAATACAGCGCCAAAGCGCTCTTCCCCGAAGCTCCGATACAATACCAGCCACAGTTCGTCTCCAACGACATGTCTGACCATCCGGTCATTGGAGAGTGGCTCGATACCGAGTTCTTCACTGTAAGTGTCTCTGCTTACAGTGTTCATGCATTAGTATCGGAGGAACAAGCAAAGCTTGACCTCCAATGGATGTCTGATGTAACCAGGAACGAGGTCCGCATCATCGAAGACGATCCTTATATATCTGTGGACCAACAAGAACTGGAAAGACTTCTTGGGCCAGAAGTCTTGGAACTCACCACTACTGGCAACACTCTGTAG
Protein Sequence MSSQLVSDSVMFDPRSYGEYPSSESAASLPLSFNVRSQHVFLTYPRCPIPPKDAGSFLKKLCKRYNIQYMYIAQELHQDGEPHLHAFLQFDKVFRTTSAKYFDFFEFHPNIQAARNPEKTLEYCQKNPADFYEDGVFVKPKASRKRKLASFTRDKKMKQIMANATSRDEYLSMIRKAFPFDWAIRLQQFEYSAKALFPEAPIQYQPQFVSNDMSDHPVIGEWLDTEFFTVSVSAYSVHALVSEEQAKLDLQWMSDVTRNEVRIIEDDPYISVDQQELERLLGPEVLELTTTGNTL