Bromus catharticus striate mosaic virus


Basic Information

Genus Mastrevirus
NCBI Assembly GCF_000890415.1
Isolate Australia
Release date 2015/2/22
Submitter Hadfield,J., Martin,D.P., Stainton,D., Kraberger,S., Owor,B.E., Shepherd,D.N., Lakay,F., Markham,P.G., Greber,R.S., Briddon,R.W., Varsani,A., Hatfield,J.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_014822
TAATATTACCGCCCATCTTTAGCCGAGGGACCATGCCCAACCGGTCCCGAGGCGCCCGGACCCCCCAAACACTAGGGGTTGCACCCCGCAATATGATTTTCGAATCTGACTGCCATCTTCCTTTGTTTTGTCTTTATAAGACTAGATCGCACTAGTACGCTATGGCGGAGTACCCTCAGTCTGCTTTCGTTTTATCTGGTGCGATTCCACATCAAAGCAAGGACGAAGGCTTTGCCTCGTCTTTGAAGGTTACTGCTCTATCTTTGTTCGCAGCATTCATTGCTGCTGCCATCTTGTGTTTCCTATACAAGACTTGTCTTGCAGATTGCTATACGCAATACCGGACTACCGGTCTGAGCAGTACATCTTCATCTGGCTTTGGTCGAACCTCTGAGGCTTCGACAGCTGTCCCGCGGACAGCGTCTGAGGTTTCTATTCCCTTAGGGGATAGATCTGCTACTCCATCTTCCTGTTTACCTACATCTGGTATTTCATCTATTTGATTTGTCATGACGTCTTCCTCGAAGAGGAAACGTGGATCTGGTAAGACGAAGACGCGCAAGAAGGCGCGTTACACGAAGTGGACATCATCGAGAACAACGTCAGCTGCAGACTCTCTGCAGGTACAGACGTTCCTGTGGGCTGAGGATCAGTCCTTCAATACTGGTGGAGGTTGCAGACTGCTAACCTCCTTCACGCGTGGTTCAGGAGAGAACCAACGCAAATCCCAGGAGACCATTACGTACAAGGTTGCCGTCAACCTTGGCATCTCCGCCTCCACTACCGTTCAGAAGTATTGCCTGACCAGCCATCCTATATGTTGGCTGGTCTACGATAAGACGCCTGGGATTGCTGACCTGACTCCAACTGACATCTTTGATGTCCCGACTGGGTTGAACAACTGGCCTTCAACCTGGAAGGTCAAGCGCGAAGCATCTCACCGCTTCGTGGTGAAACGGCGCTGGCCGTTTAGACTGTCCGTCAATGGCTCTACGTTCTCTGCAGATTATACGAAGCTGCCGGTGCCCAATACAGACAACCTGTGTACGATCAACAGGTTCGCCAAGGGACTTGGAGTGCGAACCGAATGGAAGGACACGGTTTCTGCTGACGCCTCCGACATCAAGGGCGGAGCCCTGTACATAGTATTAGCCCCGGCTAATGGGCTTGTATTCACAGCTAGAGGTGTCATTAAAGTGTACTTCAAGAGTGTGGGCAATCAGTAGCCCAATGTAATGAGCCCATAGGGCGATGAATAAAATGGCACATTTTATTATGTCATTATGACGAACGAGTACAACGAGAAAATTACATAATTGGTTTTTGTGGGTCGCGAGGGGGAACCCGGAGCACGCACCCAAAAACACTAAACACACAAACCCAGAATATCTATAGGATACATGGCCGGCGCGTGCCGATAGTCACGCTGTAGCTGGCCCTAAGCTTCGAAGAAGCTCTCCCCTGCATACATGTAATGTATGATACAGTTTGTCTCAAACCAGCCAACCTGACTAGGTTGCATTTGTTTGAGCCAGTCTTCGTCCTCGTTCACGAGGATTATTGATGGAACTCCATTCTTGAGCATACGTCGTTTACCATATTTTGGATTTACGGTAATGTCAAACTGGCATCCAACAAGCCCTTTCCAACAAGGAACGAACTTGAATGGTATGTCATCTATGACATTGTAAGTTGCGTTAGCAACTAAGTTGAGGAAGTCGACGCTGTGTTGCCAGTAGTTGTGAGCTCCCAGACTTCTAGCCCAAGAAGTCTTTCCAGTTCTTGTTGGTCCGCAAATGTAGAGTGATCTTCTTCGTTCATCAGGACGTCTGTCCTGCTAATATCAGACATCCATTGGAGGTCAAGCCTCGCTTGGTCCTCCGTTACGCCATTATGTATGGAATATGCATAAGGACTTACAGAAAATAATTCTGCTTGGAGCCATGCTCCAATCACCGGATGTTCATCCTGTGCTGGCATCCCGAAGGGATCCATATATGGCGTAGGAACCGAAGGGAATAAGCTCTCTGCGGAGTATTGGAATTGTTGCAACCTCGTTGCCCAATCGAATGGGAACGTATTCCTGACCATCGAGAGATAGTCCTCCTTGCAGGTACTGCTCTTGATTATCTCCGCCATTTTGGCGTCTTTAGTTGATGGAGCATCAACCTTCTTCTTCTTCTGCTTGGTGCTTGCTTGGAAAACCCCCGTTTCTACGAAACATAAGGGGTTTTTTTTGATGTATGCTAACACCTTGTGTGGCATTCTTGCATTCTGCACGTTAGGATGAAATTCTTCGACGTCGAAGAATTTAGCACTCTTGGTGCGAACATATTTCTTGCATTGTACCAGACAATGCAAATGGTAAGATCCATCTTGATGTTCTTCTCTTGCCACGTAGACATACGTGGGTTCGAACCTTCGAAGAAGGCTTGAGAGGTGTTCTTGCATGAACACCGGATCAAGGTGGCACTTGCTGTACGTTAAGAAAATGTTCCTTGATCTTACCTCGAAGCATGCTGCGACCGCCCCTGGGGCGCCAACCTCCCCGCTCGGTGAGCGGGGGGCGCCAGTTTGCCCCCTGGCGTCTGATGTCTCACTGACAAAGGAGGCCATCTCGTCAGAGGCTATCGTGGATAGACTCTCAGCCCTTGGATGATCTTTGAGATCCGAGGTTTTGAAAAACTCCCTTCCTAGACCCTTGCCCCTTGGCGCCCCCCCCCCCGCGCCCTATCTTATAGGGCCTCGGGTGGGTGGCTTTTTTCTGGGCCGGGCCGGCGTAAAGATGGGCAAGCAA

Gene Information

NCBI Accession YP_004089625.1
Location 162-503
Protein Name movement protein
Coding Region ATGGCGGAGTACCCTCAGTCTGCTTTCGTTTTATCTGGTGCGATTCCACATCAAAGCAAGGACGAAGGCTTTGCCTCGTCTTTGAAGGTTACTGCTCTATCTTTGTTCGCAGCATTCATTGCTGCTGCCATCTTGTGTTTCCTATACAAGACTTGTCTTGCAGATTGCTATACGCAATACCGGACTACCGGTCTGAGCAGTACATCTTCATCTGGCTTTGGTCGAACCTCTGAGGCTTCGACAGCTGTCCCGCGGACAGCGTCTGAGGTTTCTATTCCCTTAGGGGATAGATCTGCTACTCCATCTTCCTGTTTACCTACATCTGGTATTTCATCTATTTGA
Protein Sequence MAEYPQSAFVLSGAIPHQSKDEGFASSLKVTALSLFAAFIAAAILCFLYKTCLADCYTQYRTTGLSSTSSSGFGRTSEASTAVPRTASEVSIPLGDRSATPSSCLPTSGISSI

NCBI Accession YP_004089626.1
Location 510-1226
Protein Name coat protein
Coding Region ATGACGTCTTCCTCGAAGAGGAAACGTGGATCTGGTAAGACGAAGACGCGCAAGAAGGCGCGTTACACGAAGTGGACATCATCGAGAACAACGTCAGCTGCAGACTCTCTGCAGGTACAGACGTTCCTGTGGGCTGAGGATCAGTCCTTCAATACTGGTGGAGGTTGCAGACTGCTAACCTCCTTCACGCGTGGTTCAGGAGAGAACCAACGCAAATCCCAGGAGACCATTACGTACAAGGTTGCCGTCAACCTTGGCATCTCCGCCTCCACTACCGTTCAGAAGTATTGCCTGACCAGCCATCCTATATGTTGGCTGGTCTACGATAAGACGCCTGGGATTGCTGACCTGACTCCAACTGACATCTTTGATGTCCCGACTGGGTTGAACAACTGGCCTTCAACCTGGAAGGTCAAGCGCGAAGCATCTCACCGCTTCGTGGTGAAACGGCGCTGGCCGTTTAGACTGTCCGTCAATGGCTCTACGTTCTCTGCAGATTATACGAAGCTGCCGGTGCCCAATACAGACAACCTGTGTACGATCAACAGGTTCGCCAAGGGACTTGGAGTGCGAACCGAATGGAAGGACACGGTTTCTGCTGACGCCTCCGACATCAAGGGCGGAGCCCTGTACATAGTATTAGCCCCGGCTAATGGGCTTGTATTCACAGCTAGAGGTGTCATTAAAGTGTACTTCAAGAGTGTGGGCAATCAGTAG
Protein Sequence MTSSSKRKRGSGKTKTRKKARYTKWTSSRTTSAADSLQVQTFLWAEDQSFNTGGGCRLLTSFTRGSGENQRKSQETITYKVAVNLGISASTTVQKYCLTSHPICWLVYDKTPGIADLTPTDIFDVPTGLNNWPSTWKVKREASHRFVVKRRWPFRLSVNGSTFSADYTKLPVPNTDNLCTINRFAKGLGVRTEWKDTVSADASDIKGGALYIVLAPANGLVFTARGVIKVYFKSVGNQ

NCBI Accession YP_004089627.1
Location 1439-1831,1921-2616
Protein Name Rep
Coding Region ATGGCCTCCTTTGTCAGTGAGACATCAGACGCCAGGGGGCAAACTGGCGCCCCCCGCTCACCGAGCGGGGAGGTTGGCGCCCCAGGGGCGGTCGCAGCATGCTTCGAGGTAAGATCAAGGAACATTTTCTTAACGTACAGCAAGTGCCACCTTGATCCGGTGTTCATGCAAGAACACCTCTCAAGCCTTCTTCGAAGGTTCGAACCCACGTATGTCTACGTGGCAAGAGAAGAACATCAAGATGGATCTTACCATTTGCATTGTCTGGTACAATGCAAGAAATATGTTCGCACCAAGAGTGCTAAATTCTTCGACGTCGAAGAATTTCATCCTAACGTGCAGAATGCAAGAATGCCACACAAGGTGTTAGCATACATCAAAAAAAACCCCTTATGTTTCGTAGAAACGGGGGTTTTCCAAGCAAGCACCAAGCAGAAGAAGAAGAAGGTTGATGCTCCATCAACTAAAGACGCCAAAATGGCGGAGATAATCAAGAGCAGTACCTGCAAGGAGGACTATCTCTCGATGGTCAGGAATACGTTCCCATTCGATTGGGCAACGAGGTTGCAACAATTCCAATACTCCGCAGAGAGCTTATTCCCTTCGGTTCCTACGCCATATATGGATCCCTTCGGGATGCCAGCACAGGATGAACATCCGGTGATTGGAGCATGGCTCCAAGCAGAATTATTTTCTAGACGTCCTGATGAACGAAGAAGATCACTCTACATTTGCGGACCAACAAGAACTGGAAAGACTTCTTGGGCTAGAAGTCTGGGAGCTCACAACTACTGGCAACACAGCGTCGACTTCCTCAACTTAGTTGCTAACGCAACTTACAATGTCATAGATGACATACCATTCAAGTTCGTTCCTTGTTGGAAAGGGCTTGTTGGATGCCAGTTTGACATTACCGTAAATCCAAAATATGGTAAACGACGTATGCTCAAGAATGGAGTTCCATCAATAATCCTCGTGAACGAGGACGAAGACTGGCTCAAACAAATGCAACCTAGTCAGGTTGGCTGGTTTGAGACAAACTGTATCATACATTACATGTATGCAGGGGAGAGCTTCTTCGAAGCTTAG
Protein Sequence MASFVSETSDARGQTGAPRSPSGEVGAPGAVAACFEVRSRNIFLTYSKCHLDPVFMQEHLSSLLRRFEPTYVYVAREEHQDGSYHLHCLVQCKKYVRTKSAKFFDVEEFHPNVQNARMPHKVLAYIKKNPLCFVETGVFQASTKQKKKKVDAPSTKDAKMAEIIKSSTCKEDYLSMVRNTFPFDWATRLQQFQYSAESLFPSVPTPYMDPFGMPAQDEHPVIGAWLQAELFSRRPDERRRSLYICGPTRTGKTSWARSLGAHNYWQHSVDFLNLVANATYNVIDDIPFKFVPCWKGLVGCQFDITVNPKYGKRRMLKNGVPSIILVNEDEDWLKQMQPSQVGWFETNCIIHYMYAGESFFEA

NCBI Accession YP_004089628.1
Location 1705-2616
Protein Name RepA
Coding Region ATGGCCTCCTTTGTCAGTGAGACATCAGACGCCAGGGGGCAAACTGGCGCCCCCCGCTCACCGAGCGGGGAGGTTGGCGCCCCAGGGGCGGTCGCAGCATGCTTCGAGGTAAGATCAAGGAACATTTTCTTAACGTACAGCAAGTGCCACCTTGATCCGGTGTTCATGCAAGAACACCTCTCAAGCCTTCTTCGAAGGTTCGAACCCACGTATGTCTACGTGGCAAGAGAAGAACATCAAGATGGATCTTACCATTTGCATTGTCTGGTACAATGCAAGAAATATGTTCGCACCAAGAGTGCTAAATTCTTCGACGTCGAAGAATTTCATCCTAACGTGCAGAATGCAAGAATGCCACACAAGGTGTTAGCATACATCAAAAAAAACCCCTTATGTTTCGTAGAAACGGGGGTTTTCCAAGCAAGCACCAAGCAGAAGAAGAAGAAGGTTGATGCTCCATCAACTAAAGACGCCAAAATGGCGGAGATAATCAAGAGCAGTACCTGCAAGGAGGACTATCTCTCGATGGTCAGGAATACGTTCCCATTCGATTGGGCAACGAGGTTGCAACAATTCCAATACTCCGCAGAGAGCTTATTCCCTTCGGTTCCTACGCCATATATGGATCCCTTCGGGATGCCAGCACAGGATGAACATCCGGTGATTGGAGCATGGCTCCAAGCAGAATTATTTTCTGTAAGTCCTTATGCATATTCCATACATAATGGCGTAACGGAGGACCAAGCGAGGCTTGACCTCCAATGGATGTCTGATATTAGCAGGACAGACGTCCTGATGAACGAAGAAGATCACTCTACATTTGCGGACCAACAAGAACTGGAAAGACTTCTTGGGCTAGAAGTCTGGGAGCTCACAACTACTGGCAACACAGCGTCGACTTCCTCAACTTAG
Protein Sequence MASFVSETSDARGQTGAPRSPSGEVGAPGAVAACFEVRSRNIFLTYSKCHLDPVFMQEHLSSLLRRFEPTYVYVAREEHQDGSYHLHCLVQCKKYVRTKSAKFFDVEEFHPNVQNARMPHKVLAYIKKNPLCFVETGVFQASTKQKKKKVDAPSTKDAKMAEIIKSSTCKEDYLSMVRNTFPFDWATRLQQFQYSAESLFPSVPTPYMDPFGMPAQDEHPVIGAWLQAELFSVSPYAYSIHNGVTEDQARLDLQWMSDISRTDVLMNEEDHSTFADQQELERLLGLEVWELTTTGNTASTSST