Melenis repens associated virus
Basic Information
Genomic Organization
JBrowse
Genome
GCAGCATCGCCTTTTGGGCCGAGGGGACATTCGTGCGCTCTGAATGGCCCCGAGGCGTCCGCATCAGGCTGGCTGGGCATGCTTTTGGTAGTGGGTTTCCGCGTAATTCGCTTGCAAAGCAAGCCAAAGTGGGTTATATAATTGTTGGCCTTTGTTTAAAGCCATCGATGGAGAAGGGTCCACTTCCGCAGGAATTTACAGTGGGGTCTAATCTCCCTCCCGCCGGGCCCTCAGGCGTCGGTAACGACGCTGCGTGGAGGTTCTTGGTTTTACTCTTCGCGTGTACTGCGGTTGCTGGTGTCTCGGTCTTCGCCTGCTGGAGGCTCTGCGGTAAGGATCTGCTCCTTACTCTGAAGGCAAAGCGTAGCAGGACCATCACGGAGCTAGGGTTCGGCCAGACTCCCGAAGGGAGGTACGCTGGAAGGGGTGCTCAACAGGTGGGCCAGGTCGGCGGGATCCCGGGGTAGCGTAGTACACTTCGGGGCCGGTCAGCGCCCCGTTTGGCCGGCGGCGTCGATGCCGGCGGCGAGGGGGAGCACCAGTAGAAAGAGGACTAGGGATGACTGGGCCTGGGACTCTCGCAAGAGGCGTCGTGTTCGGCCCACTACGTCTGCTATTCCGCGTGGGCCTCGTGGCCGTAGGCCCAGTTTGCAGGTGGATCAGGACGTATATGCAGGGCCCACTCTCGTTGAAGTTCCCGCCGTTGGCGGGATAGTTGGTATTATGACCAACTTCATGCGGGGGAGTGACGAGAGCGCGCGTCACACTGCAGAGACTATCCTGTACAAGATAGGGATCGATGTGTATGTGACTGTCTCGGAGGCCCTTACAGTATATTCAGGTAAGGGGGTCAATGTCGCTTGGCTGGTATACGATGCGCAGCCGACTGGCACGCGTCCTACGTGTGCCGATATCTTCCCGCTGGCGAGTCCGAATTTCAATACTCAGCCGTGTGTATGGAAAGTGGGAAGGGAGGTCTGCCATCGTTTTGTGGTTAAGAGGAGGTGGCTTTTCACTCTGGAGACCAATGGAGTTCGTCCTGGCACTTCGTTCTCGGGGGCGAACGGCGTTCCCCCATGTAATAGATCCCTGTACTTCCACAAGTTCTGCAAGCGATTGGGCGTCAGGACGGAGTGGAAGAACACCCCCGGAGGGACAGATGGGGACATCAAGACGGGTGCCTTGTATCTAGTATTCGCTGCGGGCAATAAGATGTCCTTCAGCGTTAGCGGGGTATGCAGGAAGTACTTCAAGAGTGTCGGGAACCAGTAGTTTGTAATTCGGAAGAATTAATAAAAGCCGTCAGGCATTTTATTCATATTGATGATGTTTACAATGGCGTAAGCTCAAACTCAAATTACACACAAATACAAACATATGGCGGACAGGACAAAGCAGGCGGCTATAGGGCGCGCAAGGGGAAGTCCTCAACACAACACCCCGGACATACTATACAAACACTACGCCGCAGTATGCGGCGCTTCGGCTATGAAGGAATCTCCTTCATAGAGCCTGAATATTGTGCAGTTGCTCTCCAGGTAGGAGAGCTGTTCCGGCCTCATCGCCTGCAGCCAGTCCTCGTCCTCGTTAGCGAGGACTATTGTAGGTATTCCGCCCTTTATGAGCTTCTTCTTACCATATTTGGGGTTGACAGTGTAGTCTCTCTGGGCCCCGATGAGAGCCTTCCAACAAGGACAGTACTTGAATGGTATGTCATCCACTATGTTGTATTGGGCTTCAGCGTCATATAAGCTGAAGTCTACATTATTTTGCCAATAGTTATGGCGTCCTAAGCTTCGGGCCCATGTTGTCTTCCCTGTCCTTGTTGGGCCGCAGATGTAGAGGGAGCTCGGTCGCACCTGCTTTCAAAGCATGTGTCATGGAGCCATCTAAGTTCAGCTTCAGCGTCCGCGTGAGGGTGAAGAAGTTGGTATACCTCCGGAGTGACCTGGTAGACATTATCACGGACCCAATCGGACAGTGTTTCGTGGCAGCGAAACAAGGAGTCCGGAAATGGAGGTTCGTATGCCGAAGGTGGATCGGGGTAGAGCTTCTGAGCAGCGTACTCCCAGGCTTGAAGCCGGACGCAGAAGTCGTACGGGAAGCACTTCTTGACCTCATTGAGGTACTCCTGCCTGGAGGAGCACCGCCGGAGGATGGACGCCATCACCTCGTCCTTCAAGGGCTGTCGGGGAGCTCGTCTGTGTCGTATAGGCCCGGATCCTCCTGATCCAGGTTCACTATCGGCGGCAGGTCGAGAATTGTTTGAAGATCCTGCATCAGCTTGAACCGCTCCCTCTGCACGTGCAGTAGGTGCGCGTGCTCCGCGGGCCCGGAAGGTACCCCAACGGAATTCTCCCAAAGAGTATTTAGATATATAAGCCAGCACAGCTTTGCAGTTTCGAGTACCTTGTATGTTAGGGTGAAAACCCAGAATATCAAAGAAGCCTGTATCAGATGTATAGATACGTTGATTAGTCTGAGCCAGGGCGTGGATGTGTGGAGTCCCATCTTGATGGAGCTCGCGATTAACAGCGACGAAACTAACAGCGTAAGCTGAAAGGAGGTTTTTGAGATTGCTTCCCACAACCTCAGGCTCCAGTGGGCATCTGGAGTATGTGAGGAAGACATTTGAATTTTGGAAGTAGAATCGGCTAGACTCTCCTGGCTCAGTGTTCATCAGGAGAGCGGTTCAGCTCTCCAACACTTAGCCGCAGAATCGAGGGGCAAAAACTCTCTAGCCTAAACCCTCTTGCCTCTGCGCGCCGCGAATGAGTATTACGGGCCGGGCCGGTATTTATCGGCAGGCCGGCCGAGGTCCAAAAGGCGATGCGCGCGGAGGATAACATT
Gene Information
NCBI Accession
|
QDO73336.1
|
Location
|
168-467 |
Protein Name
|
movement protein |
Coding Region
|
ATGGAGAAGGGTCCACTTCCGCAGGAATTTACAGTGGGGTCTAATCTCCCTCCCGCCGGGCCCTCAGGCGTCGGTAACGACGCTGCGTGGAGGTTCTTGGTTTTACTCTTCGCGTGTACTGCGGTTGCTGGTGTCTCGGTCTTCGCCTGCTGGAGGCTCTGCGGTAAGGATCTGCTCCTTACTCTGAAGGCAAAGCGTAGCAGGACCATCACGGAGCTAGGGTTCGGCCAGACTCCCGAAGGGAGGTACGCTGGAAGGGGTGCTCAACAGGTGGGCCAGGTCGGCGGGATCCCGGGGTAG |
Protein Sequence
|
MEKGPLPQEFTVGSNLPPAGPSGVGNDAAWRFLVLLFACTAVAGVSVFACWRLCGKDLLLTLKAKRSRTITELGFGQTPEGRYAGRGAQQVGQVGGIPG |
NCBI Accession
|
QDO73337.1
|
Location
|
517-1272 |
Protein Name
|
coat protein |
Coding Region
|
ATGCCGGCGGCGAGGGGGAGCACCAGTAGAAAGAGGACTAGGGATGACTGGGCCTGGGACTCTCGCAAGAGGCGTCGTGTTCGGCCCACTACGTCTGCTATTCCGCGTGGGCCTCGTGGCCGTAGGCCCAGTTTGCAGGTGGATCAGGACGTATATGCAGGGCCCACTCTCGTTGAAGTTCCCGCCGTTGGCGGGATAGTTGGTATTATGACCAACTTCATGCGGGGGAGTGACGAGAGCGCGCGTCACACTGCAGAGACTATCCTGTACAAGATAGGGATCGATGTGTATGTGACTGTCTCGGAGGCCCTTACAGTATATTCAGGTAAGGGGGTCAATGTCGCTTGGCTGGTATACGATGCGCAGCCGACTGGCACGCGTCCTACGTGTGCCGATATCTTCCCGCTGGCGAGTCCGAATTTCAATACTCAGCCGTGTGTATGGAAAGTGGGAAGGGAGGTCTGCCATCGTTTTGTGGTTAAGAGGAGGTGGCTTTTCACTCTGGAGACCAATGGAGTTCGTCCTGGCACTTCGTTCTCGGGGGCGAACGGCGTTCCCCCATGTAATAGATCCCTGTACTTCCACAAGTTCTGCAAGCGATTGGGCGTCAGGACGGAGTGGAAGAACACCCCCGGAGGGACAGATGGGGACATCAAGACGGGTGCCTTGTATCTAGTATTCGCTGCGGGCAATAAGATGTCCTTCAGCGTTAGCGGGGTATGCAGGAAGTACTTCAAGAGTGTCGGGAACCAGTAG |
Protein Sequence
|
MPAARGSTSRKRTRDDWAWDSRKRRRVRPTTSAIPRGPRGRRPSLQVDQDVYAGPTLVEVPAVGGIVGIMTNFMRGSDESARHTAETILYKIGIDVYVTVSEALTVYSGKGVNVAWLVYDAQPTGTRPTCADIFPLASPNFNTQPCVWKVGREVCHRFVVKRRWLFTLETNGVRPGTSFSGANGVPPCNRSLYFHKFCKRLGVRTEWKNTPGGTDGDIKTGALYLVFAAGNKMSFSVSGVCRKYFKSVGNQ |
NCBI Accession
|
QDO73338.1
|
Location
|
1790-2680 |
Protein Name
|
RepA |
Coding Region
|
ATGAACACTGAGCCAGGAGAGTCTAGCCGATTCTACTTCCAAAATTCAAATGTCTTCCTCACATACTCCAGATGCCCACTGGAGCCTGAGGTTGTGGGAAGCAATCTCAAAAACCTCCTTTCAGCTTACGCTGTTAGTTTCGTCGCTGTTAATCGCGAGCTCCATCAAGATGGGACTCCACACATCCACGCCCTGGCTCAGACTAATCAACGTATCTATACATCTGATACAGGCTTCTTTGATATTCTGGGTTTTCACCCTAACATACAAGGTACTCGAAACTGCAAAGCTGTGCTGGCTTATATATCTAAATACTCTTTGGGAGAATTCCGTTGGGGTACCTTCCGGGCCCGCGGAGCACGCGCACCTACTGCACGTGCAGAGGGAGCGGTTCAAGCTGATGCAGGATCTTCAAACAATTCTCGACCTGCCGCCGATAGTGAACCTGGATCAGGAGGATCCGGGCCTATACGACACAGACGAGCTCCCCGACAGCCCTTGAAGGACGAGGTGATGGCGTCCATCCTCCGGCGGTGCTCCTCCAGGCAGGAGTACCTCAATGAGGTCAAGAAGTGCTTCCCGTACGACTTCTGCGTCCGGCTTCAAGCCTGGGAGTACGCTGCTCAGAAGCTCTACCCCGATCCACCTTCGGCATACGAACCTCCATTTCCGGACTCCTTGTTTCGCTGCCACGAAACACTGTCCGATTGGGTCCGTGATAATGTCTACCAGGTCACTCCGGAGGTATACCAACTTCTTCACCCTCACGCGGACGCTGAAGCTGAACTTAGATGGCTCCATGACACATGCTTTGAAAGCAGGTGCGACCGAGCTCCCTCTACATCTGCGGCCCAACAAGGACAGGGAAGACAACATGGGCCCGAAGCTTAG |
Protein Sequence
|
MNTEPGESSRFYFQNSNVFLTYSRCPLEPEVVGSNLKNLLSAYAVSFVAVNRELHQDGTPHIHALAQTNQRIYTSDTGFFDILGFHPNIQGTRNCKAVLAYISKYSLGEFRWGTFRARGARAPTARAEGAVQADAGSSNNSRPAADSEPGSGGSGPIRHRRAPRQPLKDEVMASILRRCSSRQEYLNEVKKCFPYDFCVRLQAWEYAAQKLYPDPPSAYEPPFPDSLFRCHETLSDWVRDNVYQVTPEVYQLLHPHADAEAELRWLHDTCFESRCDRAPSTSAAQQGQGRQHGPEA |