Eragrostis curvula streak virus
Basic Information
Genus |
Eragrovirus
|
NCBI Assembly |
GCF_000884795.1 |
Isolate |
South Africa |
Release date |
2015/2/22 |
Submitter |
Varsani,A., Shepherd,D.N., Dent,K., Monjane,A.L., Rybicki,E.P., Martin,D.P. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TAAGATTCCCGCTCCCCCCCCCCGCGAGCGCGTAGCGCGAGCCCGCCGGCCCATTTCGAAATAAAGATGTCAGGCCCACCTCCCTGCGATCGCACCGAGCCAGTACAGACAATACCTTTGTTGCTTTGCCATGGCCGGCGCAGTCTGCCGCTTTGCCATGCGGAGGTCCTTCCACCACAAGACTTAGGTCAGATCCGTTACTTGGTAAAGCGATTCAAGGCCCGTGTCCTTATTAGGACGATTGCGGAACAGTACAGCGGCAGTTCCTTAGCAGATAAGCTTGAGCTTATCTGGACGTTCTGTGATACCTTACAACATGAAGCGGAAGAGGAATGAAGCAGTTCCTGCGGGTCGCCGTTATCCTCAACGGCGTCGTATGTACTACCGTCCTCGTAAGCCTTTCTTTCCCCGCCCAGTGTATACAAGGTCCTCCAGTGTTAAACGTCCTGCCCTACAGATTAGTGGTCTCGTTTACGGGAACTCGAGTACGGGAGCCGTTAAAATTAACACTGGAGCACTTAGCCTTGTCACTGCATTTAAGGCGGGGACTGCAGAAGAGTGCAGACACTCTAATCAAACAATTGTGAAGTCCTTTGACATTAGTGGTACTCTGTACGTTCAGTCTCCCACTAGTTCAAACTGTGGTCCTGTTGTTGTTTACTTCTGGCTAATCTATGATTCAGAGCCTAGGCAGGCTATTCCTAACATAACAGATGTGTTCTCCATGCCTTGGACTAGTGTGCCGTCAAGTTGGCGTATATCTCGCTCTTCTTCACACCGATTTGTTGTGAAGAGGAAGTGGCATTACGAATTGATGTCAGATGGTGTCCTTCCCCAGAGTAACACGAAAGTGCAGACTCATAATCCCGTTTCCAGGAACATGATGGACTTCTCTAAGTACATCAATAATCTTGGTGTGCCAACGGAGTGGATGAGTACTGGTGATGGAACCATTGGTGATATCAAGAAGGGCGCGTTGTACCTCGCTGCTGCCTGCCGACAGGGAATTGTTGGAGATGCAACCAAGATTACTATAGAAGTAGAGTTTATCGGGCAGTCTCGTACTTATTTCAAGAGCATTGGCTACCAGTGATGTACTTCTTATTGCGAAACATTGTTGAATAAACATGCTAAACATAATGTTTGTTGTTGCTGTGAGCCGGGAGGCGAGGTCCGTCAAGGCCGAAGGCCTGACGGTTCCTCTGAGGCGCGAAGCGCGAAGCGCGAGTGCCGTGGAACCATATTTGCCGTTAACATTTCCTTAATTAAACGCCCCTGCGAGGCGGCGGGCGAAGCCCGACGACATACGCGCAGCGTATTACACAAGAGTAAAACACTAACAAGAATTGATACTCTCATCCCATAGTGCCTCATTAGGCCCCATGAGGTTACAGTTACAATCCACACACTTATCTAAAATACACTGAGCGCTGTGTCGCTCCGAGAACTCAAAATAAGTTGTAGGTATGTTACATGCGTCTTCATACTCCTGCTCGGCCCTTGACTTGAAGTGCGGCATTGGCATGAATTGATGTACACGGCCACAGTTACACGGCTTGGTCACCTGGATCACTATCTGAAGCCCACATTGGAGATTCAGGGTCATCTTCTCCGGTTTGCTCCCGCAGAGTAAGTGAGACTCCGCCAAAGAGAGCATCTTGGATATCCACGAAGACCGCATTTTTGCTAGTCCACGATCTAAGTTGGTGATTTTCTTCACAGTCAAGGAAGCATTTATAGGACTGGTCCGAGTTACAGAGCACGATAGCTGGTTTACCACCTTTAACCAGAACCGGTTTCCCATATTTCAGGTTACTTTGCCAGTCTTTCTGAGCTCCTAGAAACTCCTTCCAATGCTTTAGATATTTAGGGGTGACGTCATCGATGACGTTGTAACTTGCCTCGTTGTCGAATACGGCTCCGTTGAGGTCCAGATGTCCGCTGAGATAGTTGTGACGGCCCAATGATCTAGCCCAAGCCGTTTTTCCTGTACGGGAATCACCCTCAATTATCAATGATAATGGTCTATCCGGTATAGGATCTGCCCTTAAGTTATTTGCTACCCAGTCGGATAAGACTCTCGGTACAGAAAAACTGCTCTCTGAATATTTTGGAACAAAACTTGCTCGTACCTCAGACCATATGCGCCTGGCGTTGGTTACCAGGTTATGGTGTTGCAGCCAGAATGTACGCGGCTCGTTGTCTTTCACAAGCTGCAGAGCCTCCTCGATTGTACCTGAATTCACCGCTTGGTGCCACCATTCGTCTTGCTCAGCCTTTCTCTTGCGCCCCGTCAGCCTCTTGTCACATGGTACAGTACCATGTTCGTAGAAAGACCCAGCTTCTTTCTGTATGTACTTCAGACTCTTGGATACGGAACGACAAGTCTCAATCTTCGGATGGAATTCCCCGAAGTCGAATATACGAGGGTCTCGTATATCTCTACGCTCACTTGTACATACGATAGCATGAAGATGGTTGTTACCATCTTGGTGTTTTTCCTGTTGTACGCGTACGTACACTACGTGGCTAGCAAGAGTTGAGTGGGAAGTGAGGAACTCTCCCACATCCTTAGGCTCTCTTGGGCATTGTGAGTAAGTGAGGAAGAACGCCTTCCCTTGGATCCTAAATCTATGGCTGGATGAAGCCATCCTCAAACTAGTTTGGTCAAACCAAAACCCCTGGGTCAATTGTGAGGAATGAGGATGGAGGTTGTTATATAGCCTCTGGGGCCTCTGGGGGGGGGGGAGCGTC
Gene Information
NCBI Accession
|
YP_002875757.1
|
Location
|
67-336 |
Protein Name
|
movement protein |
Coding Region
|
ATGTCAGGCCCACCTCCCTGCGATCGCACCGAGCCAGTACAGACAATACCTTTGTTGCTTTGCCATGGCCGGCGCAGTCTGCCGCTTTGCCATGCGGAGGTCCTTCCACCACAAGACTTAGGTCAGATCCGTTACTTGGTAAAGCGATTCAAGGCCCGTGTCCTTATTAGGACGATTGCGGAACAGTACAGCGGCAGTTCCTTAGCAGATAAGCTTGAGCTTATCTGGACGTTCTGTGATACCTTACAACATGAAGCGGAAGAGGAATGA |
Protein Sequence
|
MSGPPPCDRTEPVQTIPLLLCHGRRSLPLCHAEVLPPQDLGQIRYLVKRFKARVLIRTIAEQYSGSSLADKLELIWTFCDTLQHEAEEE |
NCBI Accession
|
YP_002875758.1
|
Location
|
317-1093 |
Protein Name
|
coat protein |
Coding Region
|
ATGAAGCGGAAGAGGAATGAAGCAGTTCCTGCGGGTCGCCGTTATCCTCAACGGCGTCGTATGTACTACCGTCCTCGTAAGCCTTTCTTTCCCCGCCCAGTGTATACAAGGTCCTCCAGTGTTAAACGTCCTGCCCTACAGATTAGTGGTCTCGTTTACGGGAACTCGAGTACGGGAGCCGTTAAAATTAACACTGGAGCACTTAGCCTTGTCACTGCATTTAAGGCGGGGACTGCAGAAGAGTGCAGACACTCTAATCAAACAATTGTGAAGTCCTTTGACATTAGTGGTACTCTGTACGTTCAGTCTCCCACTAGTTCAAACTGTGGTCCTGTTGTTGTTTACTTCTGGCTAATCTATGATTCAGAGCCTAGGCAGGCTATTCCTAACATAACAGATGTGTTCTCCATGCCTTGGACTAGTGTGCCGTCAAGTTGGCGTATATCTCGCTCTTCTTCACACCGATTTGTTGTGAAGAGGAAGTGGCATTACGAATTGATGTCAGATGGTGTCCTTCCCCAGAGTAACACGAAAGTGCAGACTCATAATCCCGTTTCCAGGAACATGATGGACTTCTCTAAGTACATCAATAATCTTGGTGTGCCAACGGAGTGGATGAGTACTGGTGATGGAACCATTGGTGATATCAAGAAGGGCGCGTTGTACCTCGCTGCTGCCTGCCGACAGGGAATTGTTGGAGATGCAACCAAGATTACTATAGAAGTAGAGTTTATCGGGCAGTCTCGTACTTATTTCAAGAGCATTGGCTACCAGTGA |
Protein Sequence
|
MKRKRNEAVPAGRRYPQRRRMYYRPRKPFFPRPVYTRSSSVKRPALQISGLVYGNSSTGAVKINTGALSLVTAFKAGTAEECRHSNQTIVKSFDISGTLYVQSPTSSNCGPVVVYFWLIYDSEPRQAIPNITDVFSMPWTSVPSSWRISRSSSHRFVVKRKWHYELMSDGVLPQSNTKVQTHNPVSRNMMDFSKYINNLGVPTEWMSTGDGTIGDIKKGALYLAAACRQGIVGDATKITIEVEFIGQSRTYFKSIGYQ |
NCBI Accession
|
YP_002875759.1
|
Location
|
1548-2651 |
Protein Name
|
replication associated protein |
Coding Region
|
ATGGCTTCATCCAGCCATAGATTTAGGATCCAAGGGAAGGCGTTCTTCCTCACTTACTCACAATGCCCAAGAGAGCCTAAGGATGTGGGAGAGTTCCTCACTTCCCACTCAACTCTTGCTAGCCACGTAGTGTACGTACGCGTACAACAGGAAAAACACCAAGATGGTAACAACCATCTTCATGCTATCGTATGTACAAGTGAGCGTAGAGATATACGAGACCCTCGTATATTCGACTTCGGGGAATTCCATCCGAAGATTGAGACTTGTCGTTCCGTATCCAAGAGTCTGAAGTACATACAGAAAGAAGCTGGGTCTTTCTACGAACATGGTACTGTACCATGTGACAAGAGGCTGACGGGGCGCAAGAGAAAGGCTGAGCAAGACGAATGGTGGCACCAAGCGGTGAATTCAGGTACAATCGAGGAGGCTCTGCAGCTTGTGAAAGACAACGAGCCGCGTACATTCTGGCTGCAACACCATAACCTGGTAACCAACGCCAGGCGCATATGGTCTGAGGTACGAGCAAGTTTTGTTCCAAAATATTCAGAGAGCAGTTTTTCTGTACCGAGAGTCTTATCCGACTGGGTAGCAAATAACTTAAGGGCAGATCCTATACCGGATAGACCATTATCATTGATAATTGAGGGTGATTCCCGTACAGGAAAAACGGCTTGGGCTAGATCATTGGGCCGTCACAACTATCTCAGCGGACATCTGGACCTCAACGGAGCCGTATTCGACAACGAGGCAAGTTACAACGTCATCGATGACGTCACCCCTAAATATCTAAAGCATTGGAAGGAGTTTCTAGGAGCTCAGAAAGACTGGCAAAGTAACCTGAAATATGGGAAACCGGTTCTGGTTAAAGGTGGTAAACCAGCTATCGTGCTCTGTAACTCGGACCAGTCCTATAAATGCTTCCTTGACTGTGAAGAAAATCACCAACTTAGATCGTGGACTAGCAAAAATGCGGTCTTCGTGGATATCCAAGATGCTCTCTTTGGCGGAGTCTCACTTACTCTGCGGGAGCAAACCGGAGAAGATGACCCTGAATCTCCAATGTGGGCTTCAGATAGTGATCCAGGTGACCAAGCCGTGTAA |
Protein Sequence
|
MASSSHRFRIQGKAFFLTYSQCPREPKDVGEFLTSHSTLASHVVYVRVQQEKHQDGNNHLHAIVCTSERRDIRDPRIFDFGEFHPKIETCRSVSKSLKYIQKEAGSFYEHGTVPCDKRLTGRKRKAEQDEWWHQAVNSGTIEEALQLVKDNEPRTFWLQHHNLVTNARRIWSEVRASFVPKYSESSFSVPRVLSDWVANNLRADPIPDRPLSLIIEGDSRTGKTAWARSLGRHNYLSGHLDLNGAVFDNEASYNVIDDVTPKYLKHWKEFLGAQKDWQSNLKYGKPVLVKGGKPAIVLCNSDQSYKCFLDCEENHQLRSWTSKNAVFVDIQDALFGGVSLTLREQTGEDDPESPMWASDSDPGDQAV |