Passion fruit chlorotic mottle virus
Basic Information
Genus |
Citlodavirus
|
NCBI Assembly |
GCF_004132865.1 |
Isolate |
Brazil |
Release date |
2019/2/12 |
Submitter |
Fontenele,R.S., Abreu,R.A., Lamas,N.S., Alves-Freitas,D.M.T., Vidal,A.H., Poppiel,R.R., Melo,F.L., Lacorte,C., Martin,D.P., Campos,M.A., Varsani,A., Ribeiro,S.G. |
Host |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TAATATTACAAGCGCCCTCGTCGGTCACACGTGGCAGGATCTGGACCATTGAATGTGATGTACAGATGGACGGTTGAGATTCACGTATTATGGAGGAGAATAAATGCGATGTCAGTAAAGACATCAGAAAGGACATTTATTGATAGTGGAGAGAGAAAAGGTAAGGTTTTTTGAATTATTGTAGATAACACAGCACGTGGTGGGGTCGGTGAGACATTAAAGGTAGATTTTTATAGCGGGAAAGTGGTTAGCACTTTCACATCTTCAAAAATCGTACCGATGTGACTGGGGGTGTATAAAAGAGCAATAATTGCAGCTCTTTTGTACCTAGAAATGAGCATATCTTCTGAAATATTTGAGGAGATAAAAGAAAATAAGGTGAGTATCACCGTTTTTTTTATTATTTTCTTTTGCGTATCTGTTATAAATGTCGTGTGCTGTGCCTTTGGATTTTGGCAATCTGCCGGACCACGTGGTGGGGCTGTTGTGTATGTTGGCGGTGAGGCTATTAATGATGGAGGAGAAGAGATATGTTCTGGAAAAAAGGCACAGCCTGGCTAACAGGCATAGGATTCTGATAAGAATTATTCGCAAATGGGGCAGGAAAAATCGCGTAAAGGCGAATGGTGACTACGCGGAGTGGAAGAACTTATGGGCCTCCTACGGCCCAGACAAGGAGAAGATTTCCGCCCATGAGAAGGAGGCCAGCTATGGACCGAGTGATTGGGCCGTCAAAAAAAACTGTGAAGCGGATGAAAAAGGGAAAGTCCGGCGGGATTCCGGTTGGATGTAAGGGGCCTTGTAAAACCCATACAGTCGACGTTATTGCGACTGTAACTCATGATGGCAAGGGGCCAGGTTTAGTATCAAATATCAGCAAAGGTGATGACTTTGGTCAGCGTGAGGGTAGACGTATTCGGGTGACGAAATTATTACTGAGGGGTAAAGTATGGCTCCCTCAGGATAAGGCGACCATCGCTGGATCGAATATAATGAGACTGTGGGTTATGAAGGATAGGCGCCCTGGCAGTCAGCATGTTGCATTTGAGGCATTGTTTGACATGGCTGACAAAGAGCCCTCTACGGCATTAGTGAAGATGGATTATAGAGACAGATTTATTGTTATTAAGGATATGGAAATCGACCTGCATGGAGGGAGAGATTTCCGTGTGGACGAGGAAACATTTGATATAATGGTTCCGATAAATTGTGACGTGTTATTTGATCACAATGACGAGGGGTCTTTGACCACCACGTTAGAGAACGGGATTATCGTTTATTATGCTGTTACGGATCCCGCTCAAGTGATGCAACTCACAGCACAGTGTAGATTGTACTTTTTTGACTCTACGTCCAATTAATGCAAATGTTGTTTTTTTTAATCAGGATGTCGGATTCACAAATTAAGGTGTTTAATGAGTATCACAGCAGTAAGCGTGTTGAGTATCCTCTGACAAATGAGAAGACAATGATAAAGCTGGAATTCCCCTCTATGGGAGATATAAGTTGGTCAAGACTTAAGGGTCATTGTTTAAAAATTGACCATTGTCAGATAAGTTACACCCCTCAGGTGCCAGCAAATGCTAGTGGCAATGTATGCTTTGAGATACATGATATGCGAATGGAAGCGGATAAAACGTTACAGGCAGAGTACACGGTGCCCATCAGGTGTGCGGTGGAGTTGAATTTTTTTTCAACTTCTTTTTTCAGTATGAAAGACGATGTGCCATGGGAAGTGTTTTATTCCGTAGAGAATAGTGATGTACGTTCTGGTACGAGATTCTGTAAGATGAAAGCAAGGGTTAAGCTGTCTAGTGCTAAGCACAGCACCCATATTAACTTTAGATCCCCGACGATAAAAATAATATCGAGGGGGTTTAGCGAACGTGATGTTGATTTTCATCACGTGGCAATACCTAAGGCAGAGAGGTTACTCTGCAGGGGTAGTTCTGTAATAACGAGCAGGCCTCGTTTTGAGATCGAGGCTGGTGATAGTTGGGCCAGTAAGTCCAGCATTGGTGGTAGCGACGTGGACTATCCGTATAAGGAACTGGGCCGATTAAACGCGGATGCATTAGAGATTGGGCCCAGTGCAAGCCAAGTTGGTATTGGGCCAGGTAATGAGCCCAATAAAGGAAAGGTTGTAATGGATGCAGTTGAATTTGCTGAGGTGGTGGCGGATGCAGTACGGCATGGAAGTGTAATAAACAATAATATTATTAATGATAATAAGAAAAAGGCTCCGGCATAATGTGGGTCGGAGCATAGGAGCGAACTTGAGAGCGATACTTGCGGAGCGAAATACAACGCGAGAAAAGGATTATGTTTATTAATATATGCTGCGCAGCACAGGCGAAATGTAATGAGCCGTTTTTAATATGGGTGTTGCAACTTCATTTCAAATGTTATAAAATGTTCAGAAAACAACAGATAGTACTTTTTATTGAGATGGTAAAAGTAGAGTACATAATAATTTGGATAATGAATCCAAATTAGTCGAACCACTTTTCCTCTGGGGATAGGGTGTACTCATCGACGTTTGTTTCCCACCAAAGTCTGATGTCAGGTGACATCATGTCCCTCCAATCCATGTCTGGATTGCAGAGAACTATTGTTGGAATACCTCCGTTGATGGTCCTATCCGGTTTATACTTAATGTTAACTGTGAAATCTTTTTGGCATCCCAATAAAGATTTCATTATTTCTGTTGTGATTTTGCTATAACTTATGTCGTCTATTACATTATACAGAGCAAAATCATTATAATTATGAAACTTCAACGATCCGGTGGAGTAGTTATGTAATCCCATAGATCTGGCCCAGCAAGTCTTTCCCGTGCGAGAAGGTCCACAGATGAAGATGGACTTGGGCCTGTTGGGCTTTGCGTCGGGCTCCTGCAAGCATCACAGTAGTAGTAATGCATTGAGCGTATGGGAATTTCAGACTCTGTTAGCAGATGTGCTCTGCAGTCAAAGCATAAATTAATGCGTACAAATTCTGTACTCACGCATAATATGTTGCGATTAGCCCATGCCCTGACATGATGTGGTAGATTTGGGAAGTCGATGAACTGGGGAGTGTAAGGGACAAATCTACGTTGGAAGTGATCCCTTGCGAATGATTGAATTGCTGGCCAGCGTAGAACATAGTCCATGGGACGATGTTCCTTCACCATGCGGTAGAAGGTATCTTCGTCCGTAGAGATTTGGAGTATGTCTCTCCAGATTGTCTGTAAGTCTCTAGAAGGTGGTCTCCTGCTGGTGGAGAAATCACCTTCCTCAATGAAGTCGTTATCCTTGCGGATATATCGGTATGAAGCTGCTGGTGATCTAAGTGGTTCGAACGGCGGATGAAATATTCTGTTATCGTGCAATTCGTCTTTTATGTCGAAGAACCTTGGGTTAGTCGTATCAAGACGACGTCGCATTTGGACCATAGCATGTATATGGGGGTCTCCGTTTTGATGAGTTTCAAAACAGACGCAAATAAAAAAAATATCGAAGCTGCTGGGCTTTGATTTTAGGAAATTAAGGATATATTCCTTTGGGAGGAAGCATTGAGCGAAGGTTAGGAAAATGTTTTTTGCACTGAAGCGGAAGTTGGATGTTGAAGGCATTTTTTGTTTTCTGAAGTGAATCGAGGAGTCAACGCAAAGCGTACGGCGGATGAAAAGTCAACGGTGTGAGTAAACTCTATGGGATAACTAAGAGTGTGAGTGTGACCGTATACGAGGGCGCTACTTA
Gene Information
NCBI Accession
|
YP_009553192.1
|
Location
|
334-561 |
Protein Name
|
hypothetical protein |
Coding Region
|
ATGAGCATATCTTCTGAAATATTTGAGGAGATAAAAGAAAATAAGGTGAGTATCACCGTTTTTTTTATTATTTTCTTTTGCGTATCTGTTATAAATGTCGTGTGCTGTGCCTTTGGATTTTGGCAATCTGCCGGACCACGTGGTGGGGCTGTTGTGTATGTTGGCGGTGAGGCTATTAATGATGGAGGAGAAGAGATATGTTCTGGAAAAAAGGCACAGCCTGGCTAA |
Protein Sequence
|
MSISSEIFEEIKENKVSITVFFIIFFCVSVINVVCCAFGFWQSAGPRGGAVVYVGGEAINDGGEEICSGKKAQPG |
NCBI Accession
|
YP_009553193.1
|
Location
|
428-793 |
Protein Name
|
hypothetical v2 protein |
Coding Region
|
ATGTCGTGTGCTGTGCCTTTGGATTTTGGCAATCTGCCGGACCACGTGGTGGGGCTGTTGTGTATGTTGGCGGTGAGGCTATTAATGATGGAGGAGAAGAGATATGTTCTGGAAAAAAGGCACAGCCTGGCTAACAGGCATAGGATTCTGATAAGAATTATTCGCAAATGGGGCAGGAAAAATCGCGTAAAGGCGAATGGTGACTACGCGGAGTGGAAGAACTTATGGGCCTCCTACGGCCCAGACAAGGAGAAGATTTCCGCCCATGAGAAGGAGGCCAGCTATGGACCGAGTGATTGGGCCGTCAAAAAAAACTGTGAAGCGGATGAAAAAGGGAAAGTCCGGCGGGATTCCGGTTGGATGTAA |
Protein Sequence
|
MSCAVPLDFGNLPDHVVGLLCMLAVRLLMMEEKRYVLEKRHSLANRHRILIRIIRKWGRKNRVKANGDYAEWKNLWASYGPDKEKISAHEKEASYGPSDWAVKKNCEADEKGKVRRDSGWM |
NCBI Accession
|
YP_009553194.1
|
Location
|
624-1361 |
Protein Name
|
capsid protein |
Coding Region
|
ATGGTGACTACGCGGAGTGGAAGAACTTATGGGCCTCCTACGGCCCAGACAAGGAGAAGATTTCCGCCCATGAGAAGGAGGCCAGCTATGGACCGAGTGATTGGGCCGTCAAAAAAAACTGTGAAGCGGATGAAAAAGGGAAAGTCCGGCGGGATTCCGGTTGGATGTAAGGGGCCTTGTAAAACCCATACAGTCGACGTTATTGCGACTGTAACTCATGATGGCAAGGGGCCAGGTTTAGTATCAAATATCAGCAAAGGTGATGACTTTGGTCAGCGTGAGGGTAGACGTATTCGGGTGACGAAATTATTACTGAGGGGTAAAGTATGGCTCCCTCAGGATAAGGCGACCATCGCTGGATCGAATATAATGAGACTGTGGGTTATGAAGGATAGGCGCCCTGGCAGTCAGCATGTTGCATTTGAGGCATTGTTTGACATGGCTGACAAAGAGCCCTCTACGGCATTAGTGAAGATGGATTATAGAGACAGATTTATTGTTATTAAGGATATGGAAATCGACCTGCATGGAGGGAGAGATTTCCGTGTGGACGAGGAAACATTTGATATAATGGTTCCGATAAATTGTGACGTGTTATTTGATCACAATGACGAGGGGTCTTTGACCACCACGTTAGAGAACGGGATTATCGTTTATTATGCTGTTACGGATCCCGCTCAAGTGATGCAACTCACAGCACAGTGTAGATTGTACTTTTTTGACTCTACGTCCAATTAA |
Protein Sequence
|
MVTTRSGRTYGPPTAQTRRRFPPMRRRPAMDRVIGPSKKTVKRMKKGKSGGIPVGCKGPCKTHTVDVIATVTHDGKGPGLVSNISKGDDFGQREGRRIRVTKLLLRGKVWLPQDKATIAGSNIMRLWVMKDRRPGSQHVAFEALFDMADKEPSTALVKMDYRDRFIVIKDMEIDLHGGRDFRVDEETFDIMVPINCDVLFDHNDEGSLTTTLENGIIVYYAVTDPAQVMQLTAQCRLYFFDSTSN |
NCBI Accession
|
YP_009553195.1
|
Location
|
1361-2251 |
Protein Name
|
movement protein |
Coding Region
|
ATGCAAATGTTGTTTTTTTTAATCAGGATGTCGGATTCACAAATTAAGGTGTTTAATGAGTATCACAGCAGTAAGCGTGTTGAGTATCCTCTGACAAATGAGAAGACAATGATAAAGCTGGAATTCCCCTCTATGGGAGATATAAGTTGGTCAAGACTTAAGGGTCATTGTTTAAAAATTGACCATTGTCAGATAAGTTACACCCCTCAGGTGCCAGCAAATGCTAGTGGCAATGTATGCTTTGAGATACATGATATGCGAATGGAAGCGGATAAAACGTTACAGGCAGAGTACACGGTGCCCATCAGGTGTGCGGTGGAGTTGAATTTTTTTTCAACTTCTTTTTTCAGTATGAAAGACGATGTGCCATGGGAAGTGTTTTATTCCGTAGAGAATAGTGATGTACGTTCTGGTACGAGATTCTGTAAGATGAAAGCAAGGGTTAAGCTGTCTAGTGCTAAGCACAGCACCCATATTAACTTTAGATCCCCGACGATAAAAATAATATCGAGGGGGTTTAGCGAACGTGATGTTGATTTTCATCACGTGGCAATACCTAAGGCAGAGAGGTTACTCTGCAGGGGTAGTTCTGTAATAACGAGCAGGCCTCGTTTTGAGATCGAGGCTGGTGATAGTTGGGCCAGTAAGTCCAGCATTGGTGGTAGCGACGTGGACTATCCGTATAAGGAACTGGGCCGATTAAACGCGGATGCATTAGAGATTGGGCCCAGTGCAAGCCAAGTTGGTATTGGGCCAGGTAATGAGCCCAATAAAGGAAAGGTTGTAATGGATGCAGTTGAATTTGCTGAGGTGGTGGCGGATGCAGTACGGCATGGAAGTGTAATAAACAATAATATTATTAATGATAATAAGAAAAAGGCTCCGGCATAA |
Protein Sequence
|
MQMLFFLIRMSDSQIKVFNEYHSSKRVEYPLTNEKTMIKLEFPSMGDISWSRLKGHCLKIDHCQISYTPQVPANASGNVCFEIHDMRMEADKTLQAEYTVPIRCAVELNFFSTSFFSMKDDVPWEVFYSVENSDVRSGTRFCKMKARVKLSSAKHSTHINFRSPTIKIISRGFSERDVDFHHVAIPKAERLLCRGSSVITSRPRFEIEAGDSWASKSSIGGSDVDYPYKELGRLNADALEIGPSASQVGIGPGNEPNKGKVVMDAVEFAEVVADAVRHGSVINNNIINDNKKKAPA |
NCBI Accession
|
YP_009553196.1
|
Location
|
2493-2828,2993-3616 |
Protein Name
|
replication associated protein |
Coding Region
|
ATGCCTTCAACATCCAACTTCCGCTTCAGTGCAAAAAACATTTTCCTAACCTTCGCTCAATGCTTCCTCCCAAAGGAATATATCCTTAATTTCCTAAAATCAAAGCCCAGCAGCTTCGATATTTTTTTTATTTGCGTCTGTTTTGAAACTCATCAAAACGGAGACCCCCATATACATGCTATGGTCCAAATGCGACGTCGTCTTGATACGACTAACCCAAGGTTCTTCGACATAAAAGACGAATTGCACGATAACAGAATATTTCATCCGCCGTTCGAACCACTTAGATCACCAGCAGCTTCATACCGATATATCCGCAAGGATAACGACTTCATTGAGGAAGGTGATTTCTCCACCAGCAGGAGACCACCTTCTAGAGACTTACAGACAATCTGGAGAGACATACTCCAAATCTCTACGGACGAAGATACCTTCTACCGCATGGTGAAGGAACATCGTCCCATGGACTATGTTCTACGCTGGCCAGCAATTCAATCATTCGCAAGGGATCACTTCCAACGTAGATTTGTCCCTTACACTCCCCAGTTCATCGACTTCCCAAATCTACCACATCATGTCAGGGCATGGGCTAATCGCAACATATTATGCGTGAGTACAGAATTTACTTGCTGGGCCAGATCTATGGGATTACATAACTACTCCACCGGATCGTTGAAGTTTCATAATTATAATGATTTTGCTCTGTATAATGTAATAGACGACATAAGTTATAGCAAAATCACAACAGAAATAATGAAATCTTTATTGGGATGCCAAAAAGATTTCACAGTTAACATTAAGTATAAACCGGATAGGACCATCAACGGAGGTATTCCAACAATAGTTCTCTGCAATCCAGACATGGATTGGAGGGACATGATGTCACCTGACATCAGACTTTGGTGGGAAACAAACGTCGATGAGTACACCCTATCCCCAGAGGAAAAGTGGTTCGACTAA |
Protein Sequence
|
MPSTSNFRFSAKNIFLTFAQCFLPKEYILNFLKSKPSSFDIFFICVCFETHQNGDPHIHAMVQMRRRLDTTNPRFFDIKDELHDNRIFHPPFEPLRSPAASYRYIRKDNDFIEEGDFSTSRRPPSRDLQTIWRDILQISTDEDTFYRMVKEHRPMDYVLRWPAIQSFARDHFQRRFVPYTPQFIDFPNLPHHVRAWANRNILCVSTEFTCWARSMGLHNYSTGSLKFHNYNDFALYNVIDDISYSKITTEIMKSLLGCQKDFTVNIKYKPDRTINGGIPTIVLCNPDMDWRDMMSPDIRLWWETNVDEYTLSPEEKWFD |
NCBI Accession
|
YP_009553197.1
|
Location
|
2777-3616 |
Protein Name
|
RepA |
Coding Region
|
ATGCCTTCAACATCCAACTTCCGCTTCAGTGCAAAAAACATTTTCCTAACCTTCGCTCAATGCTTCCTCCCAAAGGAATATATCCTTAATTTCCTAAAATCAAAGCCCAGCAGCTTCGATATTTTTTTTATTTGCGTCTGTTTTGAAACTCATCAAAACGGAGACCCCCATATACATGCTATGGTCCAAATGCGACGTCGTCTTGATACGACTAACCCAAGGTTCTTCGACATAAAAGACGAATTGCACGATAACAGAATATTTCATCCGCCGTTCGAACCACTTAGATCACCAGCAGCTTCATACCGATATATCCGCAAGGATAACGACTTCATTGAGGAAGGTGATTTCTCCACCAGCAGGAGACCACCTTCTAGAGACTTACAGACAATCTGGAGAGACATACTCCAAATCTCTACGGACGAAGATACCTTCTACCGCATGGTGAAGGAACATCGTCCCATGGACTATGTTCTACGCTGGCCAGCAATTCAATCATTCGCAAGGGATCACTTCCAACGTAGATTTGTCCCTTACACTCCCCAGTTCATCGACTTCCCAAATCTACCACATCATGTCAGGGCATGGGCTAATCGCAACATATTATGCGTGAGTACAGAATTTGTACGCATTAATTTATGCTTTGACTGCAGAGCACATCTGCTAACAGAGTCTGAAATTCCCATACGCTCAATGCATTACTACTACTGTGATGCTTGCAGGAGCCCGACGCAAAGCCCAACAGGCCCAAGTCCATCTTCATCTGTGGACCTTCTCGCACGGGAAAGACTTGCTGGGCCAGATCTATGGGATTACATAACTACTCCACCGGATCGTTGA |
Protein Sequence
|
MPSTSNFRFSAKNIFLTFAQCFLPKEYILNFLKSKPSSFDIFFICVCFETHQNGDPHIHAMVQMRRRLDTTNPRFFDIKDELHDNRIFHPPFEPLRSPAASYRYIRKDNDFIEEGDFSTSRRPPSRDLQTIWRDILQISTDEDTFYRMVKEHRPMDYVLRWPAIQSFARDHFQRRFVPYTPQFIDFPNLPHHVRAWANRNILCVSTEFVRINLCFDCRAHLLTESEIPIRSMHYYYCDACRSPTQSPTGPSPSSSVDLLARERLAGPDLWDYITTPPDR |