Whitefly-associated begomovirus 7
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_003029165.1 |
| Isolate |
Spain |
| Release date |
2018/8/26 |
| Submitter |
Rosario,K., Seah,Y.M., Marr,C., Varsani,A., Kraberger,S., Stainton,D., Moriones,E., Polston,J.E., Duffy,S., Breitbart,M. |
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TAATATTACCGTTGGGCGCGAAATTTTTTTATTGGGTCCCCCCACTCACATGTCTCAGCCAATCAGATTGCAGCCTCAGAGCTTAGTTATTTGTTTTTTTGTCTTTATATACTTGGGCCCTAAGTATAGCTGTATAGCATAATGTGGGATCCGCTATTAAATGAGTTTCCAGACTCAGTCCATGGGCTTCGTTGTATGCTGGCCATAAAATATTTGCAGGCCGTAGAGGAGACTTATGAGCCCAATACTTTGGGCCACGATTTAATCAGAGATCTCATATCAGTCATTAGAGCCCGTGACTATGTCGAAGCGTCCAGGAGATATAATCATTTCCACTCCCGTCTCGAAGGTTCGTCGAAAGCTGAACTTCGACAGCCCATATACCAGCCGTGCTGCTGCCCGCACTGCCCCAGGCACAAGCAGGCGTCGATCGTGGACTTACAGGCCCATGTATCGAAAGCCCCTGATTTACCGGAAGTACAGAAGCCCTGATGTTCCCAGGGGGTGTGAAGGTCCTTGCAAGGTCCAGTCTTTTGATCAGAGGGATGATGTCAAGCATTTAGGTATTGTCCGTTGTCTTAGTGATGTCACTCGTGGTAATGGTATCACCCACAGGGTGGGTAAGAGGTTCTGTATCAAGTCTATATATGTCATGGGTAAGATCTGGATGGACGAGAACATCAAGAAGCAGAATCACACTAACAATGTCATCTTTTTCCTAGTACGCGATAGAAGGCCCTATGGCAAAGGCCCAATGGATTTTGGGCAGGTTTTTAACATGTTCGATAATGAGCCCAGTACAGCCACGGTCAAGAACGATCTCAGGGACAGGTTCCAGGTCATGAGAAGATTTCATCTGACAGTTACTGGTGGTCCGTCTGGCATGAAGGAGCAGAGTCTTATTAGGAAGTTCGTTAGGGGTATTAATCATCATGTAGTCTATAATCATCAGGAGGAGGCTAAGTATGAGAACCATACTGAGAACGCCTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCAGTGTATGCTTCGTTAAAGATACGGATCTATTTCTACGATTCAGTATCGAATTAATAAAGATTAAATTTTATTTCATGTTTTTCAACAACTTGTACAGTCTTAGCAATTACATCATACAGGACATGATCAACTGCTCTAATTACATTGTTGATGCTAATCACTCCTAATGAGTCTAAATACTTTAAAACCTGATATCTAAATACTTTTAAGAAAAGACCAGTCGGAGGCTGTAAGGCAGTCCAGATTTGGAAGGTCAGAAAACACTTGTGAATCCCCAGATCCCTCCTCAGGTTGTGGTTGAACCTGATCTGGACAGTTATTATGTCGTTGTTGGAGTTGAACGGCCTCTGGTCGTGTCGTAGTGTCTTGAAATAGAGGGGATTTGTTATCTCCCAGGTAAAAACGCCACTCCTTGCCTGATCCGCAGTGATGGGTTCCCCTGTGCGTGAATCCATGGTTCGTGCAGCCGATGTGGAGGTAGAATGAGCACCCACAGTCTAGGTCAACTCTCTTGCGCCTCAGTGCCCTCTTCTTGGCGTTGCGGTGGAGAACTTTGACTGCAAGGGGAGAATAGTGGCTCGTAGAGGGTGACGAAGGTTGCATTCTTGATAGCCCAGGCCTTTAGAGCTGAGTTTTTCTCTTCGTCGAGGAACTCTTTATAGGAAGACGTTGGGCCTGGATTGCATAGGAAGATAGCGGGAATACCCCCTTTAATTTGAATGGGCTTCCCGTACTTTGTGTTGCTCTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGCTTCAGGTAGTGGGGATCCACGTCATCAATGACGTTATACCATGCGTCATTGGAGTAGACCTTTGGGCTTAGATCAAGATGGCCACATAGGTAATTATGTGGGCCTAGTGACCTGGCCCACACAGTCTTACCTGTCCTGCTATCACCCTCAACAACTATACTATTGGGCCTCCACGGCCGCGCAGCGGCATCCATGACATTGTCTGACACCCATTCCTCGAGTTCTTCAGGAACTCGGTCAAAAGAAGAAGAAAGAAAAGGAGAAACGTAAGGAGCCAAGGGCTCCTGAAAAATCCTATCTAAATTGCTATTTAAATTATGGAACTGTAAAACAAAATCTTTGGGAGCTAGCTCCCTAATTATTCTAAGAGCCTCCGCCTTACTGCCAGAGTTAATTGCTGTGGCGTAAGCGTCATTGGCAGTTTGTTGGCCTCCTCTTGCAGATCTGCCATCGATCTGGAATTCTCCCCAGTCAGAGTACTCTCCACCTTTCTCGATATAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGTATGTTGCAATGGAAATGTGGTGACCTACTTGGGGAGACCAGATCGAAGAATCTTGGATTTTTGCATTTGAACTTTCCTTCGAACTGTAGCAGGGCATGCAAGTGAGGAGACCCGTCTTCATGCAGCTCTCGGCAAACCCTGATGAATTTTTTGTTTACTGCTGTATTTAGGGTATGTAATTGGGAAAGTGCTTCTGAAACTGGCAAAGAACAGTGAGGGTATGTTAGAAAATAGTTTTTTGCATATATTTGAAATCTTTTAGGAGGAGCCATAATTTCGAAATTGCCCTTGGGTACCGATTGGGAGCTCCTCACTTATCTCTGGGTATCGGTACATCGGTACCCCATATATAGTCCTAGAAATTGATTACGTGTCATAGTTACTTTTAACTTTAACTCAAATTCCCAAAGCGCCCAACGTT
Gene Information
|
NCBI Accession
|
YP_009508348.1
|
|
Location
|
142-492 |
|
Protein Name
|
precoat protein |
|
Coding Region
|
ATGTGGGATCCGCTATTAAATGAGTTTCCAGACTCAGTCCATGGGCTTCGTTGTATGCTGGCCATAAAATATTTGCAGGCCGTAGAGGAGACTTATGAGCCCAATACTTTGGGCCACGATTTAATCAGAGATCTCATATCAGTCATTAGAGCCCGTGACTATGTCGAAGCGTCCAGGAGATATAATCATTTCCACTCCCGTCTCGAAGGTTCGTCGAAAGCTGAACTTCGACAGCCCATATACCAGCCGTGCTGCTGCCCGCACTGCCCCAGGCACAAGCAGGCGTCGATCGTGGACTTACAGGCCCATGTATCGAAAGCCCCTGATTTACCGGAAGTACAGAAGCCCTGA |
|
Protein Sequence
|
MWDPLLNEFPDSVHGLRCMLAIKYLQAVEETYEPNTLGHDLIRDLISVIRARDYVEASRRYNHFHSRLEGSSKAELRQPIYQPCCCPHCPRHKQASIVDLQAHVSKAPDLPEVQKP |
|
NCBI Accession
|
YP_009508349.1
|
|
Location
|
302-1081 |
|
Protein Name
|
capsid protein |
|
Coding Region
|
ATGTCGAAGCGTCCAGGAGATATAATCATTTCCACTCCCGTCTCGAAGGTTCGTCGAAAGCTGAACTTCGACAGCCCATATACCAGCCGTGCTGCTGCCCGCACTGCCCCAGGCACAAGCAGGCGTCGATCGTGGACTTACAGGCCCATGTATCGAAAGCCCCTGATTTACCGGAAGTACAGAAGCCCTGATGTTCCCAGGGGGTGTGAAGGTCCTTGCAAGGTCCAGTCTTTTGATCAGAGGGATGATGTCAAGCATTTAGGTATTGTCCGTTGTCTTAGTGATGTCACTCGTGGTAATGGTATCACCCACAGGGTGGGTAAGAGGTTCTGTATCAAGTCTATATATGTCATGGGTAAGATCTGGATGGACGAGAACATCAAGAAGCAGAATCACACTAACAATGTCATCTTTTTCCTAGTACGCGATAGAAGGCCCTATGGCAAAGGCCCAATGGATTTTGGGCAGGTTTTTAACATGTTCGATAATGAGCCCAGTACAGCCACGGTCAAGAACGATCTCAGGGACAGGTTCCAGGTCATGAGAAGATTTCATCTGACAGTTACTGGTGGTCCGTCTGGCATGAAGGAGCAGAGTCTTATTAGGAAGTTCGTTAGGGGTATTAATCATCATGTAGTCTATAATCATCAGGAGGAGGCTAAGTATGAGAACCATACTGAGAACGCCTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCAGTGTATGCTTCGTTAAAGATACGGATCTATTTCTACGATTCAGTATCGAATTAA |
|
Protein Sequence
|
MSKRPGDIIISTPVSKVRRKLNFDSPYTSRAAARTAPGTSRRRSWTYRPMYRKPLIYRKYRSPDVPRGCEGPCKVQSFDQRDDVKHLGIVRCLSDVTRGNGITHRVGKRFCIKSIYVMGKIWMDENIKKQNHTNNVIFFLVRDRRPYGKGPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMRRFHLTVTGGPSGMKEQSLIRKFVRGINHHVVYNHQEEAKYENHTENALLLYMACTHASNPVYASLKIRIYFYDSVSN |
|
NCBI Accession
|
YP_009508350.1
|
|
Location
|
1078-1482 |
|
Protein Name
|
replication enhancer protein |
|
Coding Region
|
ATGGATTCACGCACAGGGGAACCCATCACTGCGGATCAGGCAAGGAGTGGCGTTTTTACCTGGGAGATAACAAATCCCCTCTATTTCAAGACACTACGACACGACCAGAGGCCGTTCAACTCCAACAACGACATAATAACTGTCCAGATCAGGTTCAACCACAACCTGAGGAGGGATCTGGGGATTCACAAGTGTTTTCTGACCTTCCAAATCTGGACTGCCTTACAGCCTCCGACTGGTCTTTTCTTAAAAGTATTTAGATATCAGGTTTTAAAGTATTTAGACTCATTAGGAGTGATTAGCATCAACAATGTAATTAGAGCAGTTGATCATGTCCTGTATGATGTAATTGCTAAGACTGTACAAGTTGTTGAAAAACATGAAATAAAATTTAATCTTTATTAA |
|
Protein Sequence
|
MDSRTGEPITADQARSGVFTWEITNPLYFKTLRHDQRPFNSNNDIITVQIRFNHNLRRDLGIHKCFLTFQIWTALQPPTGLFLKVFRYQVLKYLDSLGVISINNVIRAVDHVLYDVIAKTVQVVEKHEIKFNLY |
|
NCBI Accession
|
YP_009508351.1
|
|
Location
|
1223-1630 |
|
Protein Name
|
transactivator protein |
|
Coding Region
|
ATGCAACCTTCGTCACCCTCTACGAGCCACTATTCTCCCCTTGCAGTCAAAGTTCTCCACCGCAACGCCAAGAAGAGGGCACTGAGGCGCAAGAGAGTTGACCTAGACTGTGGGTGCTCATTCTACCTCCACATCGGCTGCACGAACCATGGATTCACGCACAGGGGAACCCATCACTGCGGATCAGGCAAGGAGTGGCGTTTTTACCTGGGAGATAACAAATCCCCTCTATTTCAAGACACTACGACACGACCAGAGGCCGTTCAACTCCAACAACGACATAATAACTGTCCAGATCAGGTTCAACCACAACCTGAGGAGGGATCTGGGGATTCACAAGTGTTTTCTGACCTTCCAAATCTGGACTGCCTTACAGCCTCCGACTGGTCTTTTCTTAAAAGTATTTAG |
|
Protein Sequence
|
MQPSSPSTSHYSPLAVKVLHRNAKKRALRRKRVDLDCGCSFYLHIGCTNHGFTHRGTHHCGSGKEWRFYLGDNKSPLFQDTTTRPEAVQLQQRHNNCPDQVQPQPEEGSGDSQVFSDLPNLDCLTASDWSFLKSI |
|
NCBI Accession
|
YP_009508352.1
|
|
Location
|
1530-2618 |
|
Protein Name
|
replication initiator protein |
|
Coding Region
|
ATGGCTCCTCCTAAAAGATTTCAAATATATGCAAAAAACTATTTTCTAACATACCCTCACTGTTCTTTGCCAGTTTCAGAAGCACTTTCCCAATTACATACCCTAAATACAGCAGTAAACAAAAAATTCATCAGGGTTTGCCGAGAGCTGCATGAAGACGGGTCTCCTCACTTGCATGCCCTGCTACAGTTCGAAGGAAAGTTCAAATGCAAAAATCCAAGATTCTTCGATCTGGTCTCCCCAAGTAGGTCACCACATTTCCATTGCAACATACAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTATATCGAGAAAGGTGGAGAGTACTCTGACTGGGGAGAATTCCAGATCGATGGCAGATCTGCAAGAGGAGGCCAACAAACTGCCAATGACGCTTACGCCACAGCAATTAACTCTGGCAGTAAGGCGGAGGCTCTTAGAATAATTAGGGAGCTAGCTCCCAAAGATTTTGTTTTACAGTTCCATAATTTAAATAGCAATTTAGATAGGATTTTTCAGGAGCCCTTGGCTCCTTACGTTTCTCCTTTTCTTTCTTCTTCTTTTGACCGAGTTCCTGAAGAACTCGAGGAATGGGTGTCAGACAATGTCATGGATGCCGCTGCGCGGCCGTGGAGGCCCAATAGTATAGTTGTTGAGGGTGATAGCAGGACAGGTAAGACTGTGTGGGCCAGGTCACTAGGCCCACATAATTACCTATGTGGCCATCTTGATCTAAGCCCAAAGGTCTACTCCAATGACGCATGGTATAACGTCATTGATGACGTGGATCCCCACTACCTGAAGCACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAGAGCAACACAAAGTACGGGAAGCCCATTCAAATTAAAGGGGGTATTCCCGCTATCTTCCTATGCAATCCAGGCCCAACGTCTTCCTATAAAGAGTTCCTCGACGAAGAGAAAAACTCAGCTCTAAAGGCCTGGGCTATCAAGAATGCAACCTTCGTCACCCTCTACGAGCCACTATTCTCCCCTTGCAGTCAAAGTTCTCCACCGCAACGCCAAGAAGAGGGCACTGAGGCGCAAGAGAGTTGA |
|
Protein Sequence
|
MAPPKRFQIYAKNYFLTYPHCSLPVSEALSQLHTLNTAVNKKFIRVCRELHEDGSPHLHALLQFEGKFKCKNPRFFDLVSPSRSPHFHCNIQGAKSSSDVKSYIEKGGEYSDWGEFQIDGRSARGGQQTANDAYATAINSGSKAEALRIIRELAPKDFVLQFHNLNSNLDRIFQEPLAPYVSPFLSSSFDRVPEELEEWVSDNVMDAAARPWRPNSIVVEGDSRTGKTVWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPAIFLCNPGPTSSYKEFLDEEKNSALKAWAIKNATFVTLYEPLFSPCSQSSPPQRQEEGTEAQES |
|
NCBI Accession
|
YP_009508353.1
|
|
Location
|
2171-2467 |
|
Protein Name
|
C4 |
|
Coding Region
|
ATGAAGACGGGTCTCCTCACTTGCATGCCCTGCTACAGTTCGAAGGAAAGTTCAAATGCAAAAATCCAAGATTCTTCGATCTGGTCTCCCCAAGTAGGTCACCACATTTCCATTGCAACATACAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTATATCGAGAAAGGTGGAGAGTACTCTGACTGGGGAGAATTCCAGATCGATGGCAGATCTGCAAGAGGAGGCCAACAAACTGCCAATGACGCTTACGCCACAGCAATTAACTCTGGCAGTAAGGCGGAGGCTCTTAGAATAA |
|
Protein Sequence
|
MKTGLLTCMPCYSSKESSNAKIQDSSIWSPQVGHHISIATYRELNPAPMSSPISRKVESTLTGENSRSMADLQEEANKLPMTLTPQQLTLAVRRRLLE |