Verbena mottle virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_018580625.1
Isolate Colombia
Release date 2021/6/1
Submitter Lopez-Lopez,K., Jara-Tejada,F., Arguello-Astorga,G.R., Vaca-Vaca,J.C.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055544
ACCGGATGGCCGCGCTTTTTTCCCCCCCTCCAGGTGGCGCGATCTCCCTCGCCTTCCTGGTGGTCCCATCCTCTTTAATTTGAATTATTGTCGCGCAGCGTTAGTCTCAGCCAATCATATTGCGCCTGACGAGCTTAGATATTTGTAACAACTTGGCGCCCAAGTTGTTAGTGCGTTATAAATTAAAGAGCCCTTGGTCCACTGCCTTTAACTCAAAATGCCTAAGCGGGATGCCCCGTGGCGCTTGTTGGCGGGAACCTCAAAGGTGAGCCGTAATGTCAATTATTCTCCTCGTGCAGGCAGTGGCCCAAAGTTAAACAGGGCCTCAGAATGGGTTAACAGGCCCATGTACAGAAAGCCCAGGATCTATCGAACGCTAAGGACTCCTGACGTGCCCAGAGGATGTGAAGGCCCGTGTAAGGTACAGTCCTACGAACAGCGCCATGACATTTCACATGTTGGCAAGGTAATGTGTATCTCTGATGTCACACGTGGTAATGGTATTACCCACCGTGTTGGCAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTAGGGAAGATATGGATGGATGAAAATATCAAGCTCAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGCACTCCCATGGATTTTGGCCAGGTGTTTAACATGTTCGACAACGAGCCTAGCACTGCGACGGTGAAGAACGATCTCCGCGATCGTTTTCAGGTCATGCATAAGTTCTATGGGAAGGTGACAGGTGGACAATATGCCAGCAATGAACAGGCAATAGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTGTACAATCATCAAGAGGCTGGCAAATATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCTGTGTATGCAACGTTGAAGATTCGAATCTATTTTTACGATTCGATCACGAATTAATAAAATTTGAATTTTATTGAATGATTTTCCAGAACATAATTTACATACGATCTGGCTGTTGCGAAACGAACAGCTCTAATTACATTGTTAATTGAAATAACGCCTACCTGATCTAAATACATATTAACTAGATGTCTAAACCTATTCAAATAGGTCTGCCCAGAAGCTGTCATCGATATCGTCCAGACTTGGAAGTTCAGGTAGGCCTTGTGGAGATGCAACGCTTTCCTCAGGTTGTAATTGAACCGTATTTGTACGCTGTATATCCTCGTGTTCGTGTACAGTGGATCCTCTACTCTGTACAGTCTGAAATAGAGGGGATTTTCTATCTGCCAGATATACACGCCATTCTCCGCCTGATGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGCCCAGTGCAGCCTATGTGGAAGTAAATAGAGCAACCGCACTCCAGATCAATGCGGCGTCGTCTGACTGATCTCTTCTTGGCCTCCCTGTGTTGCTTCTTGATACAAGGGGGAGTTGAGGGTGATGAAGACCGCATTCTTCAAAGTCCAGTCCCTGAGTGCTGTGTTTTCCTGTTTGTCCAGGAAATCTTTATAGCTGGCACCCTCGCCAGAATTGCAGAGCACGATTGATGGTATCCCACCTTTAATCAGGACTGGCTTTCCGTACTTACAATTTGACTGCCACATCTGTTGGGCCCCGATTAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACGTCATCAATGACGTTATATTCCACTTCGTCTGAGAAAACTCTGGAATTGAAGTCTAGGTGTCCACTCATGTAATTATGTGGGCCTAATGACCGAGCCCACATCGTCTTCCCTGTTCTTGAGTCACCTTCTACTATGAGACTGACTGGCCTCAATGGCCGCGCAGCGGCACTCCTTCCAAAATAGTCGTCTGCCCACTCTTGCATCTCGTCGGGCACGTTAGTGAAAGAGGATAGTGGAAACGGAGGAGACCATGGCTCCGGAGCCTTTTTGAAAATTCTGGATGCGTTAGCAACCAGGTTGTGATGCTGAAGGAAGAAGTGTTGCGGTTGTTCTTCCTTTATGATTTGCAGAGCTTCTTCGGCAGAGGTCGCATTTAACGCCTTGGCATATGTGTCGTTAATTGATTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAACTTTCCCCATTCAATGGTGTCTCCGTCCTTGTTAATGTAGTACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAAGGTGCTGATCTTGATGGGGAAACCAGATCGAAGAATCTGTTATTCGTGCAGTTGTATTTCCCTTCGAATTGGATAAGCATGTGGAGATGGGGATTCCCATTTTCGTGAAATTCTCTGCAAATCTTGATGTACTTCTTGTTAACTGGGGTTTTCAGAGCTAGAATTTGGGAAAGTGCCTCTTCTTTTGTTAGAGAGCACTCTGGATAAGTGATGAAATAGTTTTTGGCTTTAACTGAGAATGAACCCTTTCGTGGCATTTTTGTAATAATTGATGTACCCCCAATTGCTCAGCTCTCTCAACTCTGCTGTATAATTGGGGGAACTGGGGGTACATATATACTATATCCTTCTAAGGGGATTTTCGGCCATCCGCTATAATATT

Gene Information

NCBI Accession YP_010087342.1
Location 218-973
Gene Name AR1
Protein Name coat protein
Coding Region ATGCCTAAGCGGGATGCCCCGTGGCGCTTGTTGGCGGGAACCTCAAAGGTGAGCCGTAATGTCAATTATTCTCCTCGTGCAGGCAGTGGCCCAAAGTTAAACAGGGCCTCAGAATGGGTTAACAGGCCCATGTACAGAAAGCCCAGGATCTATCGAACGCTAAGGACTCCTGACGTGCCCAGAGGATGTGAAGGCCCGTGTAAGGTACAGTCCTACGAACAGCGCCATGACATTTCACATGTTGGCAAGGTAATGTGTATCTCTGATGTCACACGTGGTAATGGTATTACCCACCGTGTTGGCAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTAGGGAAGATATGGATGGATGAAAATATCAAGCTCAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGCACTCCCATGGATTTTGGCCAGGTGTTTAACATGTTCGACAACGAGCCTAGCACTGCGACGGTGAAGAACGATCTCCGCGATCGTTTTCAGGTCATGCATAAGTTCTATGGGAAGGTGACAGGTGGACAATATGCCAGCAATGAACAGGCAATAGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTGTACAATCATCAAGAGGCTGGCAAATATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCTGTGTATGCAACGTTGAAGATTCGAATCTATTTTTACGATTCGATCACGAATTAA
Protein Sequence MPKRDAPWRLLAGTSKVSRNVNYSPRAGSGPKLNRASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN

NCBI Accession YP_010087343.1
Location 970-1368
Gene Name AL3
Protein Name replication enhancement protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCGGAGAATGGCGTGTATATCTGGCAGATAGAAAATCCCCTCTATTTCAGACTGTACAGAGTAGAGGATCCACTGTACACGAACACGAGGATATACAGCGTACAAATACGGTTCAATTACAACCTGAGGAAAGCGTTGCATCTCCACAAGGCCTACCTGAACTTCCAAGTCTGGACGATATCGATGACAGCTTCTGGGCAGACCTATTTGAATAGGTTTAGACATCTAGTTAATATGTATTTAGATCAGGTAGGCGTTATTTCAATTAACAATGTAATTAGAGCTGTTCGTTTCGCAACAGCCAGATCGTATGTAAATTATGTTCTGGAAAATCATTCAATAAAATTCAAATTTTATTAA
Protein Sequence MDSRTGELITAHQAENGVYIWQIENPLYFRLYRVEDPLYTNTRIYSVQIRFNYNLRKALHLHKAYLNFQVWTISMTASGQTYLNRFRHLVNMYLDQVGVISINNVIRAVRFATARSYVNYVLENHSIKFKFY

NCBI Accession YP_010087344.1
Location 1115-1504
Gene Name AL2
Protein Name transactivator protein
Coding Region ATGCGGTCTTCATCACCCTCAACTCCCCCTTGTATCAAGAAGCAACACAGGGAGGCCAAGAAGAGATCAGTCAGACGACGCCGCATTGATCTGGAGTGCGGTTGCTCTATTTACTTCCACATAGGCTGCACTGGGCATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCGGAGAATGGCGTGTATATCTGGCAGATAGAAAATCCCCTCTATTTCAGACTGTACAGAGTAGAGGATCCACTGTACACGAACACGAGGATATACAGCGTACAAATACGGTTCAATTACAACCTGAGGAAAGCGTTGCATCTCCACAAGGCCTACCTGAACTTCCAAGTCTGGACGATATCGATGACAGCTTCTGGGCAGACCTATTTGAATAG
Protein Sequence MRSSSPSTPPCIKKQHREAKKRSVRRRRIDLECGCSIYFHIGCTGHGFTHRGTHHCTSGGEWRVYLADRKSPLFQTVQSRGSTVHEHEDIQRTNTVQLQPEESVASPQGLPELPSLDDIDDSFWADLFE

NCBI Accession YP_010087345.1
Location 1416-2501
Gene Name AL1
Protein Name replication associated protein
Coding Region ATGCCACGAAAGGGTTCATTCTCAGTTAAAGCCAAAAACTATTTCATCACTTATCCAGAGTGCTCTCTAACAAAAGAAGAGGCACTTTCCCAAATTCTAGCTCTGAAAACCCCAGTTAACAAGAAGTACATCAAGATTTGCAGAGAATTTCACGAAAATGGGAATCCCCATCTCCACATGCTTATCCAATTCGAAGGGAAATACAACTGCACGAATAACAGATTCTTCGATCTGGTTTCCCCATCAAGATCAGCACCTTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTACTACATTAACAAGGACGGAGACACCATTGAATGGGGAAAGTTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCAATTAACGACACATATGCCAAGGCGTTAAATGCGACCTCTGCCGAAGAAGCTCTGCAAATCATAAAGGAAGAACAACCGCAACACTTCTTCCTTCAGCATCACAACCTGGTTGCTAACGCATCCAGAATTTTCAAAAAGGCTCCGGAGCCATGGTCTCCTCCGTTTCCACTATCCTCTTTCACTAACGTGCCCGACGAGATGCAAGAGTGGGCAGACGACTATTTTGGAAGGAGTGCCGCTGCGCGGCCATTGAGGCCAGTCAGTCTCATAGTAGAAGGTGACTCAAGAACAGGGAAGACGATGTGGGCTCGGTCATTAGGCCCACATAATTACATGAGTGGACACCTAGACTTCAATTCCAGAGTTTTCTCAGACGAAGTGGAATATAACGTCATTGATGACGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAATTAATCGGGGCCCAACAGATGTGGCAGTCAAATTGTAAGTACGGAAAGCCAGTCCTGATTAAAGGTGGGATACCATCAATCGTGCTCTGCAATTCTGGCGAGGGTGCCAGCTATAAAGATTTCCTGGACAAACAGGAAAACACAGCACTCAGGGACTGGACTTTGAAGAATGCGGTCTTCATCACCCTCAACTCCCCCTTGTATCAAGAAGCAACACAGGGAGGCCAAGAAGAGATCAGTCAGACGACGCCGCATTGA
Protein Sequence MPRKGSFSVKAKNYFITYPECSLTKEEALSQILALKTPVNKKYIKICREFHENGNPHLHMLIQFEGKYNCTNNRFFDLVSPSRSAPFHPNIQGAKSSSDVKYYINKDGDTIEWGKFQIDGRSARGGQQSINDTYAKALNATSAEEALQIIKEEQPQHFFLQHHNLVANASRIFKKAPEPWSPPFPLSSFTNVPDEMQEWADDYFGRSAAARPLRPVSLIVEGDSRTGKTMWARSLGPHNYMSGHLDFNSRVFSDEVEYNVIDDVAPHYLKLKHWKELIGAQQMWQSNCKYGKPVLIKGGIPSIVLCNSGEGASYKDFLDKQENTALRDWTLKNAVFITLNSPLYQEATQGGQEEISQTTPH