Verbena mottle virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_018580625.1 |
Isolate |
Colombia |
Release date |
2021/6/1 |
Submitter |
Lopez-Lopez,K., Jara-Tejada,F., Arguello-Astorga,G.R., Vaca-Vaca,J.C. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCTTTTTTCCCCCCCTCCAGGTGGCGCGATCTCCCTCGCCTTCCTGGTGGTCCCATCCTCTTTAATTTGAATTATTGTCGCGCAGCGTTAGTCTCAGCCAATCATATTGCGCCTGACGAGCTTAGATATTTGTAACAACTTGGCGCCCAAGTTGTTAGTGCGTTATAAATTAAAGAGCCCTTGGTCCACTGCCTTTAACTCAAAATGCCTAAGCGGGATGCCCCGTGGCGCTTGTTGGCGGGAACCTCAAAGGTGAGCCGTAATGTCAATTATTCTCCTCGTGCAGGCAGTGGCCCAAAGTTAAACAGGGCCTCAGAATGGGTTAACAGGCCCATGTACAGAAAGCCCAGGATCTATCGAACGCTAAGGACTCCTGACGTGCCCAGAGGATGTGAAGGCCCGTGTAAGGTACAGTCCTACGAACAGCGCCATGACATTTCACATGTTGGCAAGGTAATGTGTATCTCTGATGTCACACGTGGTAATGGTATTACCCACCGTGTTGGCAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTAGGGAAGATATGGATGGATGAAAATATCAAGCTCAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGCACTCCCATGGATTTTGGCCAGGTGTTTAACATGTTCGACAACGAGCCTAGCACTGCGACGGTGAAGAACGATCTCCGCGATCGTTTTCAGGTCATGCATAAGTTCTATGGGAAGGTGACAGGTGGACAATATGCCAGCAATGAACAGGCAATAGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTGTACAATCATCAAGAGGCTGGCAAATATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCTGTGTATGCAACGTTGAAGATTCGAATCTATTTTTACGATTCGATCACGAATTAATAAAATTTGAATTTTATTGAATGATTTTCCAGAACATAATTTACATACGATCTGGCTGTTGCGAAACGAACAGCTCTAATTACATTGTTAATTGAAATAACGCCTACCTGATCTAAATACATATTAACTAGATGTCTAAACCTATTCAAATAGGTCTGCCCAGAAGCTGTCATCGATATCGTCCAGACTTGGAAGTTCAGGTAGGCCTTGTGGAGATGCAACGCTTTCCTCAGGTTGTAATTGAACCGTATTTGTACGCTGTATATCCTCGTGTTCGTGTACAGTGGATCCTCTACTCTGTACAGTCTGAAATAGAGGGGATTTTCTATCTGCCAGATATACACGCCATTCTCCGCCTGATGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGCCCAGTGCAGCCTATGTGGAAGTAAATAGAGCAACCGCACTCCAGATCAATGCGGCGTCGTCTGACTGATCTCTTCTTGGCCTCCCTGTGTTGCTTCTTGATACAAGGGGGAGTTGAGGGTGATGAAGACCGCATTCTTCAAAGTCCAGTCCCTGAGTGCTGTGTTTTCCTGTTTGTCCAGGAAATCTTTATAGCTGGCACCCTCGCCAGAATTGCAGAGCACGATTGATGGTATCCCACCTTTAATCAGGACTGGCTTTCCGTACTTACAATTTGACTGCCACATCTGTTGGGCCCCGATTAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACGTCATCAATGACGTTATATTCCACTTCGTCTGAGAAAACTCTGGAATTGAAGTCTAGGTGTCCACTCATGTAATTATGTGGGCCTAATGACCGAGCCCACATCGTCTTCCCTGTTCTTGAGTCACCTTCTACTATGAGACTGACTGGCCTCAATGGCCGCGCAGCGGCACTCCTTCCAAAATAGTCGTCTGCCCACTCTTGCATCTCGTCGGGCACGTTAGTGAAAGAGGATAGTGGAAACGGAGGAGACCATGGCTCCGGAGCCTTTTTGAAAATTCTGGATGCGTTAGCAACCAGGTTGTGATGCTGAAGGAAGAAGTGTTGCGGTTGTTCTTCCTTTATGATTTGCAGAGCTTCTTCGGCAGAGGTCGCATTTAACGCCTTGGCATATGTGTCGTTAATTGATTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAACTTTCCCCATTCAATGGTGTCTCCGTCCTTGTTAATGTAGTACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAAGGTGCTGATCTTGATGGGGAAACCAGATCGAAGAATCTGTTATTCGTGCAGTTGTATTTCCCTTCGAATTGGATAAGCATGTGGAGATGGGGATTCCCATTTTCGTGAAATTCTCTGCAAATCTTGATGTACTTCTTGTTAACTGGGGTTTTCAGAGCTAGAATTTGGGAAAGTGCCTCTTCTTTTGTTAGAGAGCACTCTGGATAAGTGATGAAATAGTTTTTGGCTTTAACTGAGAATGAACCCTTTCGTGGCATTTTTGTAATAATTGATGTACCCCCAATTGCTCAGCTCTCTCAACTCTGCTGTATAATTGGGGGAACTGGGGGTACATATATACTATATCCTTCTAAGGGGATTTTCGGCCATCCGCTATAATATT
Gene Information
NCBI Accession
|
YP_010087342.1
|
Location
|
218-973 |
Gene Name
|
AR1 |
Protein Name
|
coat protein |
Coding Region
|
ATGCCTAAGCGGGATGCCCCGTGGCGCTTGTTGGCGGGAACCTCAAAGGTGAGCCGTAATGTCAATTATTCTCCTCGTGCAGGCAGTGGCCCAAAGTTAAACAGGGCCTCAGAATGGGTTAACAGGCCCATGTACAGAAAGCCCAGGATCTATCGAACGCTAAGGACTCCTGACGTGCCCAGAGGATGTGAAGGCCCGTGTAAGGTACAGTCCTACGAACAGCGCCATGACATTTCACATGTTGGCAAGGTAATGTGTATCTCTGATGTCACACGTGGTAATGGTATTACCCACCGTGTTGGCAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTAGGGAAGATATGGATGGATGAAAATATCAAGCTCAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGCACTCCCATGGATTTTGGCCAGGTGTTTAACATGTTCGACAACGAGCCTAGCACTGCGACGGTGAAGAACGATCTCCGCGATCGTTTTCAGGTCATGCATAAGTTCTATGGGAAGGTGACAGGTGGACAATATGCCAGCAATGAACAGGCAATAGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTGTACAATCATCAAGAGGCTGGCAAATATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCTGTGTATGCAACGTTGAAGATTCGAATCTATTTTTACGATTCGATCACGAATTAA |
Protein Sequence
|
MPKRDAPWRLLAGTSKVSRNVNYSPRAGSGPKLNRASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
NCBI Accession
|
YP_010087343.1
|
Location
|
970-1368 |
Gene Name
|
AL3 |
Protein Name
|
replication enhancement protein |
Coding Region
|
ATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCGGAGAATGGCGTGTATATCTGGCAGATAGAAAATCCCCTCTATTTCAGACTGTACAGAGTAGAGGATCCACTGTACACGAACACGAGGATATACAGCGTACAAATACGGTTCAATTACAACCTGAGGAAAGCGTTGCATCTCCACAAGGCCTACCTGAACTTCCAAGTCTGGACGATATCGATGACAGCTTCTGGGCAGACCTATTTGAATAGGTTTAGACATCTAGTTAATATGTATTTAGATCAGGTAGGCGTTATTTCAATTAACAATGTAATTAGAGCTGTTCGTTTCGCAACAGCCAGATCGTATGTAAATTATGTTCTGGAAAATCATTCAATAAAATTCAAATTTTATTAA |
Protein Sequence
|
MDSRTGELITAHQAENGVYIWQIENPLYFRLYRVEDPLYTNTRIYSVQIRFNYNLRKALHLHKAYLNFQVWTISMTASGQTYLNRFRHLVNMYLDQVGVISINNVIRAVRFATARSYVNYVLENHSIKFKFY |
NCBI Accession
|
YP_010087344.1
|
Location
|
1115-1504 |
Gene Name
|
AL2 |
Protein Name
|
transactivator protein |
Coding Region
|
ATGCGGTCTTCATCACCCTCAACTCCCCCTTGTATCAAGAAGCAACACAGGGAGGCCAAGAAGAGATCAGTCAGACGACGCCGCATTGATCTGGAGTGCGGTTGCTCTATTTACTTCCACATAGGCTGCACTGGGCATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCGGAGAATGGCGTGTATATCTGGCAGATAGAAAATCCCCTCTATTTCAGACTGTACAGAGTAGAGGATCCACTGTACACGAACACGAGGATATACAGCGTACAAATACGGTTCAATTACAACCTGAGGAAAGCGTTGCATCTCCACAAGGCCTACCTGAACTTCCAAGTCTGGACGATATCGATGACAGCTTCTGGGCAGACCTATTTGAATAG |
Protein Sequence
|
MRSSSPSTPPCIKKQHREAKKRSVRRRRIDLECGCSIYFHIGCTGHGFTHRGTHHCTSGGEWRVYLADRKSPLFQTVQSRGSTVHEHEDIQRTNTVQLQPEESVASPQGLPELPSLDDIDDSFWADLFE |
NCBI Accession
|
YP_010087345.1
|
Location
|
1416-2501 |
Gene Name
|
AL1 |
Protein Name
|
replication associated protein |
Coding Region
|
ATGCCACGAAAGGGTTCATTCTCAGTTAAAGCCAAAAACTATTTCATCACTTATCCAGAGTGCTCTCTAACAAAAGAAGAGGCACTTTCCCAAATTCTAGCTCTGAAAACCCCAGTTAACAAGAAGTACATCAAGATTTGCAGAGAATTTCACGAAAATGGGAATCCCCATCTCCACATGCTTATCCAATTCGAAGGGAAATACAACTGCACGAATAACAGATTCTTCGATCTGGTTTCCCCATCAAGATCAGCACCTTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTACTACATTAACAAGGACGGAGACACCATTGAATGGGGAAAGTTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCAATTAACGACACATATGCCAAGGCGTTAAATGCGACCTCTGCCGAAGAAGCTCTGCAAATCATAAAGGAAGAACAACCGCAACACTTCTTCCTTCAGCATCACAACCTGGTTGCTAACGCATCCAGAATTTTCAAAAAGGCTCCGGAGCCATGGTCTCCTCCGTTTCCACTATCCTCTTTCACTAACGTGCCCGACGAGATGCAAGAGTGGGCAGACGACTATTTTGGAAGGAGTGCCGCTGCGCGGCCATTGAGGCCAGTCAGTCTCATAGTAGAAGGTGACTCAAGAACAGGGAAGACGATGTGGGCTCGGTCATTAGGCCCACATAATTACATGAGTGGACACCTAGACTTCAATTCCAGAGTTTTCTCAGACGAAGTGGAATATAACGTCATTGATGACGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAATTAATCGGGGCCCAACAGATGTGGCAGTCAAATTGTAAGTACGGAAAGCCAGTCCTGATTAAAGGTGGGATACCATCAATCGTGCTCTGCAATTCTGGCGAGGGTGCCAGCTATAAAGATTTCCTGGACAAACAGGAAAACACAGCACTCAGGGACTGGACTTTGAAGAATGCGGTCTTCATCACCCTCAACTCCCCCTTGTATCAAGAAGCAACACAGGGAGGCCAAGAAGAGATCAGTCAGACGACGCCGCATTGA |
Protein Sequence
|
MPRKGSFSVKAKNYFITYPECSLTKEEALSQILALKTPVNKKYIKICREFHENGNPHLHMLIQFEGKYNCTNNRFFDLVSPSRSAPFHPNIQGAKSSSDVKYYINKDGDTIEWGKFQIDGRSARGGQQSINDTYAKALNATSAEEALQIIKEEQPQHFFLQHHNLVANASRIFKKAPEPWSPPFPLSSFTNVPDEMQEWADDYFGRSAAARPLRPVSLIVEGDSRTGKTMWARSLGPHNYMSGHLDFNSRVFSDEVEYNVIDDVAPHYLKLKHWKELIGAQQMWQSNCKYGKPVLIKGGIPSIVLCNSGEGASYKDFLDKQENTALRDWTLKNAVFITLNSPLYQEATQGGQEEISQTTPH |