Tomato vein clearing leaf deformation virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_018585205.1
Isolate Argentina
Release date 2021/6/1
Submitter Vaghi Medina,C.G., Bornancini,V.A., Lopez Lambertini,P.M.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055570
ACCGGATGGCCGCCCGAAGTTTTGGAGACATTGTGATAGGTCTTTAATTTGAATAAAGGACGCGGCGTGGGTTTTGTGGTCCCTTTCTCGGAAATTTCGCCGCAATTACGTGTGGGCCAACGAGAGCGCGTCTTGAAAGCTTAGTTATTTGATAAGTCTTGGTCGCTAAGTTTGACACGTGTATAAATTGGTACGACATATAAATGTCTCATCAATCATGTTGCTGAACCCGACATGATTGGGTGGAGTGGATGCTTTATGTCTCCATTTGATTTCTAGTTCGAAATGCCGAAGCGGGATGGTTCATGGCGTTCGATCGAGGGAACGTCGAAGGTTAGGCGCTCCCTCAATTTTTCGCCCCGTGGAGGTACGGGCTTTAAAGTTAATAAATCACAGGCCTGGGTTAATAGGCCCATGTACAGGAAGCCCAGGATCTATCGGGCTTTCAGATCGCCTGATGTTCCTAAAGGGTGTGAGGGGCCTTGTAAGGTCCAATCGTACGAGCAACGCCATGATATCGCTCATACTGGGAAGGTGATATGCATCTCCGACGTGACGCGTGGCAATGGCATCACTCACCGTGTCGGTAAGCGTTTCTGTGTGAAGTCTGTCTATATCTTAGGTAAGATATGGATGGATGACAATATCAAGCTGAGGAACCACACGAACAACGTGATGTTCTGGCTGGTGAGAGACCGGAGACCGTATGGTACCCCCATGGATTTCGGACAGGTGTTTAACTTGTTCGACAACGAGCCAAGCACCGCCACCGTGAAGAACGATCTCCGTGATCGTTTCCAAGTGATGCACAAGTTCCACACCACGGTCACGGGTGGTCAGTATGCTGCCAAGGAGCAGGCCCTGGTTAAGCGGTTCTGGAAGGTCAACAACCATGTGACCTATAACCATCAGGAGGCTGCTAAGTACGAGAACCACACTGAGAACGCCCTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCTGTGTATGCTACATTGAAGATTCGGATCTATTTTTATGATTCGACTTCAAATTAATAAAGTTTGAATTTTATTGAATGATGTTCGAGTACATAAGTTACATATGCTTTATCTGTTGCGAAACGAACAGCTCTAATTACATTATTAATTGAAATAACACCTAATTGATCTAAATACAATAAAACTAAATGTCTAAGTCTATTTAAATATGTCGTCCCAGAAGCTGTCACTGATGTCGTCCAGACCTGGAAGTTCAAGAAGGCTTTGTGAAGACCCAGCTCCTTCCTCAAGTTGTGGTTGAACCGGATCTGGATGTGGTACACTCTGGCGTTCGTGTATAGGGGGTCTTCCACCCTGGTTATTTTGAAATACAGGGGATTTGTTATCTCCCAGATATACACGCCATTCTCTGCTTGAGGCGCAGTGATGAATTCCCCTGTGCGTGAATCCATGATTGGCGCAGTTGATGTGCCTGAAGAAAGAGCAGCCGCAATCGATGTCGATTCGTCTACGGCGAATTGCCCTGCGCTTGGCCGCTCTGTGTGCTACCTTGATAGAGGGGGGAGTCGAGGAAGATGAATTTAGCATTGTGGAGTGTCCAGGCTCTTAAAGATGCATTTTCCTCTTTGTCTAGGAATGCTTTATAGCTGGAACCCGCTCCTGGATTGCATAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTTCCGTATTTACAGTTTGACTGCCAGTCTCTTTGGGCCCCAATTATCTCTTTCCAGTGCTTTAGATATTGCGGATTGACATCATCAATGACGTTGTAATCCACATTGTTTGAGTAAACCCTAGAATTTAAATCTAAGTGTCCACACAAATAATTATGTGGGCCCAGAGCACGCGCCCACATCGTCTTCCCCGTCCGACTATCACCCTCGACGATTATACTAATAGGTCGTTCCGGCCGCGCAGCGGAACTCCTCCCAAAATAATCGTCCGCCCACTCTTGCATCTCGTCGGGAACGTTAGTGAAAGAGGAGAGTGGAAACGGAGGAGCCCATGGTTCCGGAGGCTTCTGAAATATCCGTTCTAGATTTGATCGGATGTTATGATGTTGAAGGACGAAGTCTTTTGGTTGTTCTTCCTTCAGTATATTGAGCGCCTCCAAGATGGATCCAGCGTTGAGGACCTTGGCATACGTATCGTTGGCAGATTGCTGACCTCCTCTAGCTGATCTGCCATCGATTTGGAAAACTCCAAAATCAATGAAGTCTCCGTGTTTCTCCACATAGGTTTTGACGTCCGATGAGCTCTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGAGATACAAGATCGAAGAATCTTTGATTTGTGCAGACGTATTTTCCTTCGAACTGGATGAGCACATGGAGATGAGGCTCCCCATTCTCATGGAGTTCTCTGCAAACCCTAATGAATTTCTTGTTGACAGGAGTCCCTAGGGCTTGCAATTGGGATAGGGCTTCTTCTTTAGAAAGGGAACAATGTGGGTAAGTGAGGAAGAAATTCTTGGATTGGACTCTAAAACGCTTCGGAGCTGATGGCATTTTTGTAATAATGGGGATGTCTCCAATTGGAGCTCTCGCAAAGTATTCAAATGAATTGGAGACTGGAGTACAATATATACAAGTGCCCTTAATCTTGAAAATCTCCACGTGGCGGCCATCCGTTATAATATT

Gene Information

NCBI Accession YP_010087636.1
Location 286-1041
Gene Name AV1
Protein Name capsid protein
Coding Region ATGCCGAAGCGGGATGGTTCATGGCGTTCGATCGAGGGAACGTCGAAGGTTAGGCGCTCCCTCAATTTTTCGCCCCGTGGAGGTACGGGCTTTAAAGTTAATAAATCACAGGCCTGGGTTAATAGGCCCATGTACAGGAAGCCCAGGATCTATCGGGCTTTCAGATCGCCTGATGTTCCTAAAGGGTGTGAGGGGCCTTGTAAGGTCCAATCGTACGAGCAACGCCATGATATCGCTCATACTGGGAAGGTGATATGCATCTCCGACGTGACGCGTGGCAATGGCATCACTCACCGTGTCGGTAAGCGTTTCTGTGTGAAGTCTGTCTATATCTTAGGTAAGATATGGATGGATGACAATATCAAGCTGAGGAACCACACGAACAACGTGATGTTCTGGCTGGTGAGAGACCGGAGACCGTATGGTACCCCCATGGATTTCGGACAGGTGTTTAACTTGTTCGACAACGAGCCAAGCACCGCCACCGTGAAGAACGATCTCCGTGATCGTTTCCAAGTGATGCACAAGTTCCACACCACGGTCACGGGTGGTCAGTATGCTGCCAAGGAGCAGGCCCTGGTTAAGCGGTTCTGGAAGGTCAACAACCATGTGACCTATAACCATCAGGAGGCTGCTAAGTACGAGAACCACACTGAGAACGCCCTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCTGTGTATGCTACATTGAAGATTCGGATCTATTTTTATGATTCGACTTCAAATTAA
Protein Sequence MPKRDGSWRSIEGTSKVRRSLNFSPRGGTGFKVNKSQAWVNRPMYRKPRIYRAFRSPDVPKGCEGPCKVQSYEQRHDIAHTGKVICISDVTRGNGITHRVGKRFCVKSVYILGKIWMDDNIKLRNHTNNVMFWLVRDRRPYGTPMDFGQVFNLFDNEPSTATVKNDLRDRFQVMHKFHTTVTGGQYAAKEQALVKRFWKVNNHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSTSN

NCBI Accession YP_010087637.1
Location 1038-1436
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAATTCATCACTGCGCCTCAAGCAGAGAATGGCGTGTATATCTGGGAGATAACAAATCCCCTGTATTTCAAAATAACCAGGGTGGAAGACCCCCTATACACGAACGCCAGAGTGTACCACATCCAGATCCGGTTCAACCACAACTTGAGGAAGGAGCTGGGTCTTCACAAAGCCTTCTTGAACTTCCAGGTCTGGACGACATCAGTGACAGCTTCTGGGACGACATATTTAAATAGACTTAGACATTTAGTTTTATTGTATTTAGATCAATTAGGTGTTATTTCAATTAATAATGTAATTAGAGCTGTTCGTTTCGCAACAGATAAAGCATATGTAACTTATGTACTCGAACATCATTCAATAAAATTCAAACTTTATTAA
Protein Sequence MDSRTGEFITAPQAENGVYIWEITNPLYFKITRVEDPLYTNARVYHIQIRFNHNLRKELGLHKAFLNFQVWTTSVTASGTTYLNRLRHLVLLYLDQLGVISINNVIRAVRFATDKAYVTYVLEHHSIKFKLY

NCBI Accession YP_010087638.1
Location 1183-1572
Gene Name AC2
Protein Name transcriptional activator protein
Coding Region ATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAGGTAGCACACAGAGCGGCCAAGCGCAGGGCAATTCGCCGTAGACGAATCGACATCGATTGCGGCTGCTCTTTCTTCAGGCACATCAACTGCGCCAATCATGGATTCACGCACAGGGGAATTCATCACTGCGCCTCAAGCAGAGAATGGCGTGTATATCTGGGAGATAACAAATCCCCTGTATTTCAAAATAACCAGGGTGGAAGACCCCCTATACACGAACGCCAGAGTGTACCACATCCAGATCCGGTTCAACCACAACTTGAGGAAGGAGCTGGGTCTTCACAAAGCCTTCTTGAACTTCCAGGTCTGGACGACATCAGTGACAGCTTCTGGGACGACATATTTAAATAG
Protein Sequence MLNSSSSTPPSIKVAHRAAKRRAIRRRRIDIDCGCSFFRHINCANHGFTHRGIHHCASSREWRVYLGDNKSPVFQNNQGGRPPIHERQSVPHPDPVQPQLEEGAGSSQSLLELPGLDDISDSFWDDIFK

NCBI Accession YP_010087639.1
Location 1493-2566
Gene Name AC1
Protein Name replication-associated protein
Coding Region ATGCCATCAGCTCCGAAGCGTTTTAGAGTCCAATCCAAGAATTTCTTCCTCACTTACCCACATTGTTCCCTTTCTAAAGAAGAAGCCCTATCCCAATTGCAAGCCCTAGGGACTCCTGTCAACAAGAAATTCATTAGGGTTTGCAGAGAACTCCATGAGAATGGGGAGCCTCATCTCCATGTGCTCATCCAGTTCGAAGGAAAATACGTCTGCACAAATCAAAGATTCTTCGATCTTGTATCTCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGAGCTCATCGGACGTCAAAACCTATGTGGAGAAACACGGAGACTTCATTGATTTTGGAGTTTTCCAAATCGATGGCAGATCAGCTAGAGGAGGTCAGCAATCTGCCAACGATACGTATGCCAAGGTCCTCAACGCTGGATCCATCTTGGAGGCGCTCAATATACTGAAGGAAGAACAACCAAAAGACTTCGTCCTTCAACATCATAACATCCGATCAAATCTAGAACGGATATTTCAGAAGCCTCCGGAACCATGGGCTCCTCCGTTTCCACTCTCCTCTTTCACTAACGTTCCCGACGAGATGCAAGAGTGGGCGGACGATTATTTTGGGAGGAGTTCCGCTGCGCGGCCGGAACGACCTATTAGTATAATCGTCGAGGGTGATAGTCGGACGGGGAAGACGATGTGGGCGCGTGCTCTGGGCCCACATAATTATTTGTGTGGACACTTAGATTTAAATTCTAGGGTTTACTCAAACAATGTGGATTACAACGTCATTGATGATGTCAATCCGCAATATCTAAAGCACTGGAAAGAGATAATTGGGGCCCAAAGAGACTGGCAGTCAAACTGTAAATACGGAAAGCCAGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTATGCAATCCAGGAGCGGGTTCCAGCTATAAAGCATTCCTAGACAAAGAGGAAAATGCATCTTTAAGAGCCTGGACACTCCACAATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAGGTAGCACACAGAGCGGCCAAGCGCAGGGCAATTCGCCGTAG
Protein Sequence MPSAPKRFRVQSKNFFLTYPHCSLSKEEALSQLQALGTPVNKKFIRVCRELHENGEPHLHVLIQFEGKYVCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYVEKHGDFIDFGVFQIDGRSARGGQQSANDTYAKVLNAGSILEALNILKEEQPKDFVLQHHNIRSNLERIFQKPPEPWAPPFPLSSFTNVPDEMQEWADDYFGRSSAARPERPISIIVEGDSRTGKTMWARALGPHNYLCGHLDLNSRVYSNNVDYNVIDDVNPQYLKHWKEIIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGAGSSYKAFLDKEENASLRAWTLHNAKFIFLDSPLYQGSTQSGQAQGNSP

NCBI Accession YP_010087640.1
Location 2113-2412
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGAGAATGGGGAGCCTCATCTCCATGTGCTCATCCAGTTCGAAGGAAAATACGTCTGCACAAATCAAAGATTCTTCGATCTTGTATCTCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGAGCTCATCGGACGTCAAAACCTATGTGGAGAAACACGGAGACTTCATTGATTTTGGAGTTTTCCAAATCGATGGCAGATCAGCTAGAGGAGGTCAGCAATCTGCCAACGATACGTATGCCAAGGTCCTCAACGCTGGATCCATCTTGGAGGCGCTCAATATACTGA
Protein Sequence MRMGSLISMCSSSSKENTSAQIKDSSILYLQPGQHISIRTFRELRAHRTSKPMWRNTETSLILEFSKSMADQLEEVSNLPTIRMPRSSTLDPSWRRSIY