Boerhavia yellow spot virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002821785.1
Isolate Mexico
Release date 2018/8/25
Submitter Hernandez-Zepeda,C., Idris,A.M., Carnevali,G., Brown,J.K., Moreno-Valenzuela,O.A.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038439
ACCGGATGGCCGCGATTTTTTTTGGACGGTCACGATTTGATTAGGCCCCACCACAAATGACAAAGCACTGCGTTTTGAGTGCCCCCCTTTAATTTGAACAGCTAGTGGACACGTGGTCCACCCATATTTCGTTTGTGGGGCCTATGTAATGACTTAACTGTTAAGTTGACAGGCAATAAATAGATGGTCCCCCCCATTATCTATTTTTGCTTTAATTTGAAATGCCTAAGCGGGACGCCCCTTGGCGCCTAATGGCTGGGCCCTCCAAGGTTAGCCGTAATGTCAATTATTCGCCTAGGGCTGGTCCCAAAGCTGATAAGCCGTCGATTTGGGCGAACAGGCCCATGTACAGGAAGCCAAGGTTTTACCGGCTATTCAGAACTCCAGACGTCCCCAAAGGATGTGAAGGGCCGTGTAAGGTCCAGTCGTTTGAGCAGCGCCATGATATATCCCATGTGGGTAAGGTCATGTGCATTTCCGACGTGACAAGGGGCAACGGCATTACGCACCGCGTTGGTAAGCGGTTCTGCGTCAAGTCTGTGTACATATTAGGCAAGGTGTGGATGGACGATAATATTAAACTGAAGAACCACACCAACATCGTCATGTTCTGGCTGGTCAGGGACCGGAGACCCTACGGCACTCCCATGGATTTTGGCCAGGTGTTCAACATGTTCGACAACGAGCCTAGTACTGCCACTGTGAAGAACGATCTGCGTGATCGGTTCCAAGTCATGCACAAGTTCCACGCGAAGGTTACCGGCGGTCAGTATGCCAGTAACGAGCAGTCCCTGGTGAAGAGATTCTGGAGGGTCAACAACCACGTGGTGTACAACCATCAGGAGGCTGCCAAGTACGAGAATCACACTGAGAACGCCCTGTTATTGTATATGGCATGTAGTCATGCCTCAAATCCTGTGTATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAATAAAAATTGAATTTTATTTCATGATTCTCGAGTACATGTTGTACATATGGTTTGTCTGTTGCAAACCGAACAGCTCTTATTACATTGTTTATACAGATGAGCCCTAGATTGTCTAGGTACAACATGACTAAGTGCCTAAATCTATTTAAATAAGTCGTCCCAGAAGCTCGAACTGATGTCGTCCAGACTTGGAAATTCAGGAAGGCCTTGTGTAGATGCAGTGCCCTCCTCAGGTTGTGGTTGAACCGGATCTGGACGTGGTATATCCTCGTGTCTATGTACGGGAGGTCCTCTATTTTCTGCATCCTGAAATAGAGGGGATTTGGAACCTCCCAGATAAAAGCGGAATTCTCTGCCTGACGAGCAGTGATGCTCTCCCCTGTGCGTGAATCCATAGTTTGCACAGCTGAGAGAGAGGAAAATAGTGCAGCCGCAGTTCAGGTCGATGCGTCGTCTCCGGATGGCTCTTCTCTTAGCAATCCTGTGTTGTGGTTTAATAGAGGGGGGAGTGGATGAAGATGAATTTTGCATTTTGCTCTGTCCACTCCCTGAGAGCTGCATTCTCCAATTTATTGAGGAAGTCTTTATAGCTGGACCCCTCGCCAGGATTGCAAAGCACGATTGATGGGATGCCACCTTTAATTTGAACTGGCTTGCCGTACTTGCAATTTGATTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAGATAATGCGGGCTGACATCATCGATGACGTTGTACATCACATCGTTTGAGTAAACCCTTGGATTGAAATCCAGGTGGCCACTCAGATAGTTGTGCCGCCCCAAAGCACGGGCCCACATTGTTTTGCCCACCCTCGAACCACCTTCAACGATTAAGCTTATAGGCCTGTGCGGCCGCGCAGCGGAATGGCCACCGAAATACTCATCAGCCCAGCATTGCATCTCCTCCGGCACATTTGTGAAAGAGGAAAGTTCAAATGGAGGAACCCATGGTTGAGGAGCCTTTGCGAAGATCCTCTCTAGGTTAGACTTCAGATTGTGATAATCTTTCACAAAGTCCCTTGGTTGTTCCTCCTTTAGAACTTGAAGTGCTTCTTGCACTCCAGATGCGTTCAGCGCCTTGGCGTATGAGTCGTTAGACGTCTGCTGACCTCCTCTAGCAGATCTCCCGTCGACCTGGAATTCCCCCCATTCAAGGGTATCTCCGTCCTTGTCAATGTAGGACTTGACATCGGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGATCGGGTTGGGGAAACCAGGTCGAACTGTCGTTGATTCGTGATCTGGACTTTCCCTTCCAACTGCAAGAGCACATGGAGGTGAGGTTCCCCATTTTCGTGTAGCTCCCTGCAGATTTTAATGTATTTCTTGTTGGAAGGGAGCTGGAGAGACCTTATTTGCTGAAGAGCCGCTTCCTTTGTAAGCGAGCATTTGGGATATGTGAGGAAGATGTTTTTAGCTTGGAGTCTAAAACGTTTAGCCAGTGGCATTTTGTGTAAATAAGGGGTGTACTCCAATTGAGGTTCCCTTCAAAATGCTGAAACAATTGGAGTATTGGAGTACAATATATAGTAAGAGAAGTCAGTACATAGCGGCCATCCGATCTAATATT

Gene Information

NCBI Accession YP_009506374.1
Location 222-971
Gene Name AV1
Protein Name coat protein
Coding Region ATGCCTAAGCGGGACGCCCCTTGGCGCCTAATGGCTGGGCCCTCCAAGGTTAGCCGTAATGTCAATTATTCGCCTAGGGCTGGTCCCAAAGCTGATAAGCCGTCGATTTGGGCGAACAGGCCCATGTACAGGAAGCCAAGGTTTTACCGGCTATTCAGAACTCCAGACGTCCCCAAAGGATGTGAAGGGCCGTGTAAGGTCCAGTCGTTTGAGCAGCGCCATGATATATCCCATGTGGGTAAGGTCATGTGCATTTCCGACGTGACAAGGGGCAACGGCATTACGCACCGCGTTGGTAAGCGGTTCTGCGTCAAGTCTGTGTACATATTAGGCAAGGTGTGGATGGACGATAATATTAAACTGAAGAACCACACCAACATCGTCATGTTCTGGCTGGTCAGGGACCGGAGACCCTACGGCACTCCCATGGATTTTGGCCAGGTGTTCAACATGTTCGACAACGAGCCTAGTACTGCCACTGTGAAGAACGATCTGCGTGATCGGTTCCAAGTCATGCACAAGTTCCACGCGAAGGTTACCGGCGGTCAGTATGCCAGTAACGAGCAGTCCCTGGTGAAGAGATTCTGGAGGGTCAACAACCACGTGGTGTACAACCATCAGGAGGCTGCCAAGTACGAGAATCACACTGAGAACGCCCTGTTATTGTATATGGCATGTAGTCATGCCTCAAATCCTGTGTATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAA
Protein Sequence MPKRDAPWRLMAGPSKVSRNVNYSPRAGPKADKPSIWANRPMYRKPRFYRLFRTPDVPKGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKVWMDDNIKLKNHTNIVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFHAKVTGGQYASNEQSLVKRFWRVNNHVVYNHQEAAKYENHTENALLLYMACSHASNPVYATLKIRIYFYDSITN

NCBI Accession YP_009506375.1
Location 968-1366
Gene Name AC3
Protein Name AC3
Coding Region ATGGATTCACGCACAGGGGAGAGCATCACTGCTCGTCAGGCAGAGAATTCCGCTTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAGGATGCAGAAAATAGAGGACCTCCCGTACATAGACACGAGGATATACCACGTCCAGATCCGGTTCAACCACAACCTGAGGAGGGCACTGCATCTACACAAGGCCTTCCTGAATTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGACTTATTTAAATAGATTTAGGCACTTAGTCATGTTGTACCTAGACAATCTAGGGCTCATCTGTATAAACAATGTAATAAGAGCTGTTCGGTTTGCAACAGACAAACCATATGTACAACATGTACTCGAGAATCATGAAATAAAATTCAATTTTTATTAA
Protein Sequence MDSRTGESITARQAENSAFIWEVPNPLYFRMQKIEDLPYIDTRIYHVQIRFNHNLRRALHLHKAFLNFQVWTTSVRASGTTYLNRFRHLVMLYLDNLGLICINNVIRAVRFATDKPYVQHVLENHEIKFNFY

NCBI Accession YP_009506376.1
Location 1113-1502
Gene Name AC2
Protein Name AC2
Coding Region ATGCAAAATTCATCTTCATCCACTCCCCCCTCTATTAAACCACAACACAGGATTGCTAAGAGAAGAGCCATCCGGAGACGACGCATCGACCTGAACTGCGGCTGCACTATTTTCCTCTCTCTCAGCTGTGCAAACTATGGATTCACGCACAGGGGAGAGCATCACTGCTCGTCAGGCAGAGAATTCCGCTTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAGGATGCAGAAAATAGAGGACCTCCCGTACATAGACACGAGGATATACCACGTCCAGATCCGGTTCAACCACAACCTGAGGAGGGCACTGCATCTACACAAGGCCTTCCTGAATTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGACTTATTTAAATAG
Protein Sequence MQNSSSSTPPSIKPQHRIAKRRAIRRRRIDLNCGCTIFLSLSCANYGFTHRGEHHCSSGREFRFYLGGSKSPLFQDAENRGPPVHRHEDIPRPDPVQPQPEEGTASTQGLPEFPSLDDISSSFWDDLFK

NCBI Accession YP_009506377.1
Location 1465-2499
Gene Name AC1
Protein Name replication protein
Coding Region ATGCCACTGGCTAAACGTTTTAGACTCCAAGCTAAAAACATCTTCCTCACATATCCCAAATGCTCGCTTACAAAGGAAGCGGCTCTTCAGCAAATAAGGTCTCTCCAGCTCCCTTCCAACAAGAAATACATTAAAATCTGCAGGGAGCTACACGAAAATGGGGAACCTCACCTCCATGTGCTCTTGCAGTTGGAAGGGAAAGTCCAGATCACGAATCAACGACAGTTCGACCTGGTTTCCCCAACCCGATCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGATGTCAAGTCCTACATTGACAAGGACGGAGATACCCTTGAATGGGGGGAATTCCAGGTCGACGGGAGATCTGCTAGAGGAGGTCAGCAGACGTCTAACGACTCATACGCCAAGGCGCTGAACGCATCTGGAGTGCAAGAAGCACTTCAAGTTCTAAAGGAGGAACAACCAAGGGACTTTGTGAAAGATTATCACAATCTGAAGTCTAACCTAGAGAGGATCTTCGCAAAGGCTCCTCAACCATGGGTTCCTCCATTTGAACTTTCCTCTTTCACAAATGTGCCGGAGGAGATGCAATGCTGGGCTGATGAGTATTTCGGTGGCCATTCCGCTGCGCGGCCGCACAGGCCTATAAGCTTAATCGTTGAAGGTGGTTCGAGGGTGGGCAAAACAATGTGGGCCCGTGCTTTGGGGCGGCACAACTATCTGAGTGGCCACCTGGATTTCAATCCAAGGGTTTACTCAAACGATGTGATGTACAACGTCATCGATGATGTCAGCCCGCATTATCTAAAGCTAAAGCACTGGAAAGAATTGATTGGGGCCCAAAGGGACTGGCAATCAAATTGCAAGTACGGCAAGCCAGTTCAAATTAAAGGTGGCATCCCATCAATCGTGCTTTGCAATCCTGGCGAGGGGTCCAGCTATAAAGACTTCCTCAATAAATTGGAGAATGCAGCTCTCAGGGAGTGGACAGAGCAAAATGCAAAATTCATCTTCATCCACTCCCCCCTCTATTAA
Protein Sequence MPLAKRFRLQAKNIFLTYPKCSLTKEAALQQIRSLQLPSNKKYIKICRELHENGEPHLHVLLQLEGKVQITNQRQFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQVDGRSARGGQQTSNDSYAKALNASGVQEALQVLKEEQPRDFVKDYHNLKSNLERIFAKAPQPWVPPFELSSFTNVPEEMQCWADEYFGGHSAARPHRPISLIVEGGSRVGKTMWARALGRHNYLSGHLDFNPRVYSNDVMYNVIDDVSPHYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLNKLENAALREWTEQNAKFIFIHSPLY