Tomato leaf curl Tanzania virus


Basic Information

Genus Begomovirus
Isolate TZ-Ten-05
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

DQ519575
ACCAGATGGCCGCGCCCGAAAAAGAAAAAGTTGACCCCCCATGATTTATTGTCAGCCAATGAGAATAGCGCCTGAAAGCTTAGATATTTATTTTTGTCTTTATATACTTGGCTGTTAAGTAGTAACCGCTGTCATAATGTGGGATCCGTTAGTAAATGAGTTTCCAGACTCTGTTCACGGGTTTCGTTGTATGCTTGCAATAAAATATTTACAGGCCGTTGAGTCCACTTACGAGCCCAATACATTGGGCCACGATTTAATTCGAGATCTCATTTGTGTCGTTAGAGCCAGAGATTATGTCGAAGCGACCCGGAGATATAATCATTTCAACGCCCGCCTCGAAGGTGCGTCGAAGGCTGAACTTCGACAACCCGTATACCAGCCGTGCTGCTGTCCCCATCGTCCCAGGCACAAGCAGACGTCGATCATGGACTTACAGGCCCATGTATCGAAAGCCCAGGATGTACAGAATGTACAGAAGCCCTGATGTTCCTCGGGGTTGTGAAGGCCCATGTAAGGTTCAGTCTTATGAGCAGAGGGATGATGTAAAGCATACTGGTATTGTTCGTTGTGTTAGTGATGTAACTAGAGGTAATGGAATTACTCATAGAGTAGGAAAACGGTTCTGCATTAAGTCCATATATATTTTAGGAAAAATATGGATGGATGAGAATATCAAGAAGCAGAACCATACTAATCAGGTCATGTTTTTTTTGGTCCGTGATAGAAGGCCCTATGGCCCAAGCCCAATGGATTTTGGGCAGGTGTTTAACATGTTTGATAATGAGCCCAGTACAGCCACTGTGAAGAATGACCTCCGAGACAGATATCAAGTTTTGCGGAAATTTCATGCAACTGTTGTCGGTGGACCATCTGGGATGAAAGAGCAGGCATTACTTAAAAGATTTTTTAGAATTAATAATCATGTAGTTTATAATCATCAAGAGAATGCTAAGTATGAGAATCATACTGAGAATGCTCTGTTGTTGTATATGGCATGTACTCATGCTTCTAACCCTGTGTATGCTACGTTGAAAATACGTATCTATTTCTATGTTTCAGTTGGGAATTAATAAAGTTTGAATTTTATATCATAATTTTGTTCCACCCATAAGGTCCCGTTGATTACATCAAACAATACATATTCTATTGCTCTAATTACATTATTAATTGAAATTACACCAAGATTGTTTAAATATTTTCTAACTTGGGTCTTAAAGACTCTTAAGAAAAGACCAGTCTGAGGCTGTAAGGTTGTCCAGATCTTGAAGGTCATGAAACATTTGTGAATCCCCAGTTCCTTCCTTAGGTTGTGGTTGAATCGGAGTTGTACTGTGATGATGTCGTGGTTGTAGTTGAATGGTCTCTTCGAGTGTTCCGTGATGCTGAAATATAGGGGATTGGCGATTTCCCAGGTATAGACGCCACTCTGTGCCTGATGCGCAGTGATGAGTTCCCCGGTGCGTAAATCCATGGTTGCGACAGTTGAGTGACAAGTAGTACGAGCACCCGCAATTAAGGTCTATCCTCTTCCTCCGTTGAAGCCTCTGCTTGGCTGTTTTGTGTTGGACCTTGATGGGAATCTGAGTACAATGGCTGTTGGATGGTGACGAAGATCGCATTTTTAATTGCCCACGCCTTTAGTGGTGCGTTCTTTTCCTCGTCCAAGTACTCTTTATATGATGAAGTTGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAATTGGTTTCCCGTACTTGGTGTTGCTTTGCCAGTCCCTTTGTGCGCCCATGAATTCCTTGAAGTGTTTTAGATAATGCGGATCGACGTCATCAATGACGTTGTACCATGCATTATTACTGTACACCTTTGGACTGAGATCAAGATGACCACACAAATAATTGTGTGGTCCTAATGACCTAGCCCACATTGTTTTCCCGGTACGACTATCCCCTTCAATCACAATACTCATGGGTCTCAATGGCCGCGCAGCGGTACTGACAACATTCGCCGCCGCCCACTCTTCAAGCTCTTCTGGAACTTGATCGAAAGAAGAACATAAAAAAGGAGAAACATAATCCTCCAACGGAGGTGTAAAAATCCTATCTAAATTACACTTTAAATTATGATACTGAAAAATAAAATCTTTAGGGAGTTTCTCCCTAATAATAGCCAAAGCGGCTTCAGCGGATCCTGCGTTTAATGCCTCGGCGCATGCGTCGTTAGCATTATGGCAGCCTCCTCTAGCACTTCTGCCGTCGATCTGGAATTCCCCCCATTCGAGTGTATCTCCATCCTTGTGGATGTAGGACTTGACGTCGGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTGTTATTGGTACAATTGTACTTTCCTTCGAACTGAATGAGGGCATGCAGATGAGGTTCCCCATTCTCGTGAAGCTCTCTGCAAATTTTGATGAAACGCTTATTTGTAGGTGTTTGAAGGGCTCGTAGTTGAGTTAATGCTTCTTCTTTTGAAAGAGAACATTTAGGGTATGTGAGGAAATAATTTTTGGCTTTGATGCTAAAACGACCTGCTCTAGGCATATTGAATGTCGTATTGCAATTGGGGGGCACTCAAAGTCTATGGCAATTGGGGGAATTGGGGGACAATATATACTTGGTTACCTAATGGCATAATTGTAATTTGTTTAAATTAAATTTTGAAATCTGAATTTGAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession ABF61898.1
Location 137-487
Gene Name V2
Protein Name pre-coat protein
Coding Region ATGTGGGATCCGTTAGTAAATGAGTTTCCAGACTCTGTTCACGGGTTTCGTTGTATGCTTGCAATAAAATATTTACAGGCCGTTGAGTCCACTTACGAGCCCAATACATTGGGCCACGATTTAATTCGAGATCTCATTTGTGTCGTTAGAGCCAGAGATTATGTCGAAGCGACCCGGAGATATAATCATTTCAACGCCCGCCTCGAAGGTGCGTCGAAGGCTGAACTTCGACAACCCGTATACCAGCCGTGCTGCTGTCCCCATCGTCCCAGGCACAAGCAGACGTCGATCATGGACTTACAGGCCCATGTATCGAAAGCCCAGGATGTACAGAATGTACAGAAGCCCTGA
Protein Sequence MWDPLVNEFPDSVHGFRCMLAIKYLQAVESTYEPNTLGHDLIRDLICVVRARDYVEATRRYNHFNARLEGASKAELRQPVYQPCCCPHRPRHKQTSIMDLQAHVSKAQDVQNVQKP

NCBI Accession ABF61895.1
Location 297-1073
Gene Name V1
Protein Name coat protein
Coding Region ATGTCGAAGCGACCCGGAGATATAATCATTTCAACGCCCGCCTCGAAGGTGCGTCGAAGGCTGAACTTCGACAACCCGTATACCAGCCGTGCTGCTGTCCCCATCGTCCCAGGCACAAGCAGACGTCGATCATGGACTTACAGGCCCATGTATCGAAAGCCCAGGATGTACAGAATGTACAGAAGCCCTGATGTTCCTCGGGGTTGTGAAGGCCCATGTAAGGTTCAGTCTTATGAGCAGAGGGATGATGTAAAGCATACTGGTATTGTTCGTTGTGTTAGTGATGTAACTAGAGGTAATGGAATTACTCATAGAGTAGGAAAACGGTTCTGCATTAAGTCCATATATATTTTAGGAAAAATATGGATGGATGAGAATATCAAGAAGCAGAACCATACTAATCAGGTCATGTTTTTTTTGGTCCGTGATAGAAGGCCCTATGGCCCAAGCCCAATGGATTTTGGGCAGGTGTTTAACATGTTTGATAATGAGCCCAGTACAGCCACTGTGAAGAATGACCTCCGAGACAGATATCAAGTTTTGCGGAAATTTCATGCAACTGTTGTCGGTGGACCATCTGGGATGAAAGAGCAGGCATTACTTAAAAGATTTTTTAGAATTAATAATCATGTAGTTTATAATCATCAAGAGAATGCTAAGTATGAGAATCATACTGAGAATGCTCTGTTGTTGTATATGGCATGTACTCATGCTTCTAACCCTGTGTATGCTACGTTGAAAATACGTATCTATTTCTATGTTTCAGTTGGGAATTAA
Protein Sequence MSKRPGDIIISTPASKVRRRLNFDNPYTSRAAVPIVPGTSRRRSWTYRPMYRKPRMYRMYRSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGNGITHRVGKRFCIKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGPSPMDFGQVFNMFDNEPSTATVKNDLRDRYQVLRKFHATVVGGPSGMKEQALLKRFFRINNHVVYNHQENAKYENHTENALLLYMACTHASNPVYATLKIRIYFYVSVGN

NCBI Accession ABF61897.1
Location 1070-1474
Gene Name C3
Protein Name replication enhancement protein
Coding Region ATGGATTTACGCACCGGGGAACTCATCACTGCGCATCAGGCACAGAGTGGCGTCTATACCTGGGAAATCGCCAATCCCCTATATTTCAGCATCACGGAACACTCGAAGAGACCATTCAACTACAACCACGACATCATCACAGTACAACTCCGATTCAACCACAACCTAAGGAAGGAACTGGGGATTCACAAATGTTTCATGACCTTCAAGATCTGGACAACCTTACAGCCTCAGACTGGTCTTTTCTTAAGAGTCTTTAAGACCCAAGTTAGAAAATATTTAAACAATCTTGGTGTAATTTCAATTAATAATGTAATTAGAGCAATAGAATATGTATTGTTTGATGTAATCAACGGGACCTTATGGGTGGAACAAAATTATGATATAAAATTCAAACTTTATTAA
Protein Sequence MDLRTGELITAHQAQSGVYTWEIANPLYFSITEHSKRPFNYNHDIITVQLRFNHNLRKELGIHKCFMTFKIWTTLQPQTGLFLRVFKTQVRKYLNNLGVISINNVIRAIEYVLFDVINGTLWVEQNYDIKFKLY

NCBI Accession ABF61896.1
Location 1215-1622
Gene Name C2
Protein Name transcriptional activation protein
Coding Region ATGCGATCTTCGTCACCATCCAACAGCCATTGTACTCAGATTCCCATCAAGGTCCAACACAAAACAGCCAAGCAGAGGCTTCAACGGAGGAAGAGGATAGACCTTAATTGCGGGTGCTCGTACTACTTGTCACTCAACTGTCGCAACCATGGATTTACGCACCGGGGAACTCATCACTGCGCATCAGGCACAGAGTGGCGTCTATACCTGGGAAATCGCCAATCCCCTATATTTCAGCATCACGGAACACTCGAAGAGACCATTCAACTACAACCACGACATCATCACAGTACAACTCCGATTCAACCACAACCTAAGGAAGGAACTGGGGATTCACAAATGTTTCATGACCTTCAAGATCTGGACAACCTTACAGCCTCAGACTGGTCTTTTCTTAAGAGTCTTTAA
Protein Sequence MRSSSPSNSHCTQIPIKVQHKTAKQRLQRRKRIDLNCGCSYYLSLNCRNHGFTHRGTHHCASGTEWRLYLGNRQSPIFQHHGTLEETIQLQPRHHHSTTPIQPQPKEGTGDSQMFHDLQDLDNLTASDWSFLKSL

NCBI Accession ABF61894.1
Location 1516-2610
Gene Name C1
Protein Name replication-associated protein
Coding Region ATGCCTAGAGCAGGTCGTTTTAGCATCAAAGCCAAAAATTATTTCCTCACATACCCTAAATGTTCTCTTTCAAAAGAAGAAGCATTAACTCAACTACGAGCCCTTCAAACACCTACAAATAAGCGTTTCATCAAAATTTGCAGAGAGCTTCACGAGAATGGGGAACCTCATCTGCATGCCCTCATTCAGTTCGAAGGAAAGTACAATTGTACCAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCCACAAGGATGGAGATACACTCGAATGGGGGGAATTCCAGATCGACGGCAGAAGTGCTAGAGGAGGCTGCCATAATGCTAACGACGCATGCGCCGAGGCATTAAACGCAGGATCCGCTGAAGCCGCTTTGGCTATTATTAGGGAGAAACTCCCTAAAGATTTTATTTTTCAGTATCATAATTTAAAGTGTAATTTAGATAGGATTTTTACACCTCCGTTGGAGGATTATGTTTCTCCTTTTTTATGTTCTTCTTTCGATCAAGTTCCAGAAGAGCTTGAAGAGTGGGCGGCGGCGAATGTTGTCAGTACCGCTGCGCGGCCATTGAGACCCATGAGTATTGTGATTGAAGGGGATAGTCGTACCGGGAAAACAATGTGGGCTAGGTCATTAGGACCACACAATTATTTGTGTGGTCATCTTGATCTCAGTCCAAAGGTGTACAGTAATAATGCATGGTACAACGTCATTGATGACGTCGATCCGCATTATCTAAAACACTTCAAGGAATTCATGGGCGCACAAAGGGACTGGCAAAGCAACACCAAGTACGGGAAACCAATTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCAACTTCATCATATAAAGAGTACTTGGACGAGGAAAAGAACGCACCACTAAAGGCGTGGGCAATTAAAAATGCGATCTTCGTCACCATCCAACAGCCATTGTACTCAGATTCCCATCAAGGTCCAACACAAAACAGCCAAGCAGAGGCTTCAACGGAGGAAGAGGATAGACCTTAA
Protein Sequence MPRAGRFSIKAKNYFLTYPKCSLSKEEALTQLRALQTPTNKRFIKICRELHENGEPHLHALIQFEGKYNCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIHKDGDTLEWGEFQIDGRSARGGCHNANDACAEALNAGSAEAALAIIREKLPKDFIFQYHNLKCNLDRIFTPPLEDYVSPFLCSSFDQVPEELEEWAAANVVSTAARPLRPMSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNNAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNAPLKAWAIKNAIFVTIQQPLYSDSHQGPTQNSQAEASTEEEDRP

NCBI Accession ABF61899.1
Location 2196-2453
Gene Name C4
Protein Name C4 protein
Coding Region ATGGGGAACCTCATCTGCATGCCCTCATTCAGTTCGAAGGAAAGTACAATTGTACCAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCCACAAGGATGGAGATACACTCGAATGGGGGGAATTCCAGATCGACGGCAGAAGTGCTAGAGGAGGCTGCCATAATGCTAACGACGCATGCGCCGAGGCATTAA
Protein Sequence MGNLICMPSFSSKESTIVPITDSSTWYPQPGQHISIRTFRELNQAPTSSPTSTRMEIHSNGGNSRSTAEVLEEAAIMLTTHAPRH