Tomato leaf curl Sulawesi virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000886855.1
Isolate Indonesia:Tompaso, North Sulawesi
Release date 2015/2/22
Submitter Tsai,W.S., Shih,S.L., Green,S.K., Lee,L.M., Luther,G.C., Ratulangi,M., Sembel,D.T., Jan,F.-J.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_013413
ACCGAGGGCCGCGAAATTTTTTTCCGTACTGTGGTCCACGTTGACTGGCCAATCACATTTGAGCTTCAAAGCTTAGATAGTGCGTACCGCACTATAAAACTTGGGGGCCACGAAATAATGGCAAACATGTGGGATCCTCTAATTCATCCCTTTCCTGACACTCTGCACGGATTTCGATGTATGCTGGCAATAAAGTACTTACAATCCTTCGAGTGTAAGTATTCTCCGGATACTGTTGGGCGTGAATTTATCAGGGATCTTATTTGCATTTTGAGGTGCAAAAACTATGCCGAAGCGTTCCATAGATACAGTGTCGTCACTGCCAATGTCTATAACACGCCGGAGGCTAAATTACGGGAGTCAGTTCAGTCTCCCTGCAGCTGTCCCCACTGCCCCAGGCATGTCATACAAAAGACGTGCTTGGACAGGTCGTCCAATGTATCGGAAACCCAGATTTTACCGTGCCAGAAGGAGCAGTGATGTTCCTCGTGGCTGTGAAGGACCTTGTAAGGTCCAGTCGTATGAACAGAGACATGATATCTCTCATGTCGGTAAGGTATTGTGTGTCAGTGATGTAACTAGGGGAGGTGGTATAACTCATAGGGTAGGTAAACGTTTTTGTGTTAAGTCTGTTTACATACTAGGTAAAGTGTGGATGGATGAGAATATCAAAACCAAAAACCATACGAACAACTGTACGTTCTGGTTAGTTAGGGATAGGAGGCCTTATGGCACTCCGCAAGACTTTGGTCAGGTTTTTAATATGTATGATAACGAACCAAGTACCGCTACCGTGAAGAATGACCTGCGTGATCGATTCCAAGTGCTTCATCGATTTTCAGCTATGGTTACCGGTGGTCAATATGCTAGCAAGGAGCAAGCAATCGTGAAGAAGTTCTACAAGGTGAACAACTACGTCGTCTATAATCATCAGGAAGCTGCTAAATATGAAAATCACACGGAGAATGCTTTGTTATTGTACATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACATTGAAGATACGCATATATTTCTATGACAATGTAACAAATTAATATAAATTGAATTTTATTATATGAAGCATGTCTACATACATGGTCTCCTCTATTACATTCCATAAGACATGATTAACTGCTCTAATAACATTATTTACTGATACAACACCCAAACTATTCAGAAATTTACATACATGATATTTAAATACTCTTAAAAAATGCCAAGTCAGAGGTCGTAAACGAGTCCAAATGCGGAAGATTAAAAAACATCTGTGAATCCCCAGAGCTCTCCTGAGGTTGTGATTGAACTGGATCTGCATTTCTATGTAGTCCCAGTTGTTGTTGAACGATCTGGTTTTGTGCTTCAGCACCTTGAAATAGAGGGGATTTGGGACCATCCAAGTATAAACGCCACTCTGCGCCTGAGTTGCAGTGATGTACTCCCCTGTGCGAAAATCCACAACCATGACAGTTAAGGCTGAGATAGTATGAGCATCCACAATCTAAATCAATGCGTCTTCGCCTTGTGATTTTCTTTTTTGCAATTTTATGTTGAATTTTCTGTGGTACTTGTATATAATGGCTCGTTGAGGTAGATGAAGGTTGCATTTTTTGTAGCCCAGTCTTTTAGTGCTTTATTTTTTTCTTCTTCCAGATATTCTTTATATGAAGAAGATGGGCCTGGATTGCAGAGGAAGATAGTGGGAATGCCACCTTTAATTTGAATTGGCTTTCCGTACTTTGTGTTGCTTTGCCAATCCCTCTGGGCCCCCATGAACTCTTTAAAGTGTTTTAGGTAATGCGGGTCGACGTCATCAATGACGTTATACCAAGCATCATTGCAATACACCTTTGGACTAAGATCAAGATGGCCGCACAAGTAATTATGCCTACCAAGAGATCTTGCCCACATGGTTTTACCAGTTCTAGAAGCACCTTCAATCACAATACTTATGGGCCTCCATGGCCGCGCAGCGGCGTCAACAACATTTTCTTTTGCCCACTGTTCCAATATATGAGGAACATTATCAAATGAATCTCGACTAAATGGAGTGACATAAATTTGTTGTTGTGGTTTAAAGAGTTTATCTAGATTTGCATTTAAATTATGAAATTGAAATAGAAAGTCTCTGGGAAGTTTCTCTCTAATGATGTTCAAAGCTTCCCCTTTGGAAGCAGCATTTAAAGCAGCTGCCACAACATCGTTTGCTGCCTGTTGACCTCCTCTAGCAGATCTTCCATCGATCTGAAAACAACCCCAGTCGAGGTAATCGCCGTCCTTCTGAATGTACGACTTGATATCGGACGAAGATCTTGCTCCCTGAAAATTGGGGTGGAATGATCTGCTAGAATTAGGATGGGATATGTCGAAATGTCTTGCATTTCTAAACTTGGCTTTACCTTTGAATTGGACCAAAGCATGGATGTGCAGAGACCCATCTTGGTGTTTTTCCTGTGAAACCCTAACGAAGAGTTTCTCGGAAGGGCATGAAATGCCTAGGGTCTTCTCCAGAACAGTTTCTTTAGACAGACTACACTGGGGATATGTGAGAAATATATTCTTAGCATTAACACAGAAAGAAGGATGACGTGGCATGGCTATTGGAGACTTCACTAACTCTATACACTGGGGGACAATGGAGACTCATATATACTAGAGTCCCTTAATGGCATAATGGTAATTAGACAGAGTTACTTTAATTTGAAATTTAAATTTTTTTTCCCAAAAGCGGCCCTCGTATAATATT

Gene Information

NCBI Accession YP_003254629.1
Location 118-480
Protein Name V2
Coding Region ATGGCAAACATGTGGGATCCTCTAATTCATCCCTTTCCTGACACTCTGCACGGATTTCGATGTATGCTGGCAATAAAGTACTTACAATCCTTCGAGTGTAAGTATTCTCCGGATACTGTTGGGCGTGAATTTATCAGGGATCTTATTTGCATTTTGAGGTGCAAAAACTATGCCGAAGCGTTCCATAGATACAGTGTCGTCACTGCCAATGTCTATAACACGCCGGAGGCTAAATTACGGGAGTCAGTTCAGTCTCCCTGCAGCTGTCCCCACTGCCCCAGGCATGTCATACAAAAGACGTGCTTGGACAGGTCGTCCAATGTATCGGAAACCCAGATTTTACCGTGCCAGAAGGAGCAGTGA
Protein Sequence MANMWDPLIHPFPDTLHGFRCMLAIKYLQSFECKYSPDTVGREFIRDLICILRCKNYAEAFHRYSVVTANVYNTPEAKLRESVQSPCSCPHCPRHVIQKTCLDRSSNVSETQILPCQKEQ

NCBI Accession YP_003254630.1
Location 287-1063
Protein Name V1
Coding Region ATGCCGAAGCGTTCCATAGATACAGTGTCGTCACTGCCAATGTCTATAACACGCCGGAGGCTAAATTACGGGAGTCAGTTCAGTCTCCCTGCAGCTGTCCCCACTGCCCCAGGCATGTCATACAAAAGACGTGCTTGGACAGGTCGTCCAATGTATCGGAAACCCAGATTTTACCGTGCCAGAAGGAGCAGTGATGTTCCTCGTGGCTGTGAAGGACCTTGTAAGGTCCAGTCGTATGAACAGAGACATGATATCTCTCATGTCGGTAAGGTATTGTGTGTCAGTGATGTAACTAGGGGAGGTGGTATAACTCATAGGGTAGGTAAACGTTTTTGTGTTAAGTCTGTTTACATACTAGGTAAAGTGTGGATGGATGAGAATATCAAAACCAAAAACCATACGAACAACTGTACGTTCTGGTTAGTTAGGGATAGGAGGCCTTATGGCACTCCGCAAGACTTTGGTCAGGTTTTTAATATGTATGATAACGAACCAAGTACCGCTACCGTGAAGAATGACCTGCGTGATCGATTCCAAGTGCTTCATCGATTTTCAGCTATGGTTACCGGTGGTCAATATGCTAGCAAGGAGCAAGCAATCGTGAAGAAGTTCTACAAGGTGAACAACTACGTCGTCTATAATCATCAGGAAGCTGCTAAATATGAAAATCACACGGAGAATGCTTTGTTATTGTACATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACATTGAAGATACGCATATATTTCTATGACAATGTAACAAATTAA
Protein Sequence MPKRSIDTVSSLPMSITRRRLNYGSQFSLPAAVPTAPGMSYKRRAWTGRPMYRKPRFYRARRSSDVPRGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGGGITHRVGKRFCVKSVYILGKVWMDENIKTKNHTNNCTFWLVRDRRPYGTPQDFGQVFNMYDNEPSTATVKNDLRDRFQVLHRFSAMVTGGQYASKEQAIVKKFYKVNNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDNVTN

NCBI Accession YP_003254631.1
Location 1060-1470
Protein Name C3
Coding Region ATGGTTGTGGATTTTCGCACAGGGGAGTACATCACTGCAACTCAGGCGCAGAGTGGCGTTTATACTTGGATGGTCCCAAATCCCCTCTATTTCAAGGTGCTGAAGCACAAAACCAGATCGTTCAACAACAACTGGGACTACATAGAAATGCAGATCCAGTTCAATCACAACCTCAGGAGAGCTCTGGGGATTCACAGATGTTTTTTAATCTTCCGCATTTGGACTCGTTTACGACCTCTGACTTGGCATTTTTTAAGAGTATTTAAATATCATGTATGTAAATTTCTGAATAGTTTGGGTGTTGTATCAGTAAATAATGTTATTAGAGCAGTTAATCATGTCTTATGGAATGTAATAGAGGAGACCATGTATGTAGACATGCTTCATATAATAAAATTCAATTTATATTAA
Protein Sequence MVVDFRTGEYITATQAQSGVYTWMVPNPLYFKVLKHKTRSFNNNWDYIEMQIQFNHNLRRALGIHRCFLIFRIWTRLRPLTWHFLRVFKYHVCKFLNSLGVVSVNNVIRAVNHVLWNVIEETMYVDMLHIIKFNLY

NCBI Accession YP_003254632.1
Location 1205-1612
Protein Name C2
Coding Region ATGCAACCTTCATCTACCTCAACGAGCCATTATATACAAGTACCACAGAAAATTCAACATAAAATTGCAAAAAAGAAAATCACAAGGCGAAGACGCATTGATTTAGATTGTGGATGCTCATACTATCTCAGCCTTAACTGTCATGGTTGTGGATTTTCGCACAGGGGAGTACATCACTGCAACTCAGGCGCAGAGTGGCGTTTATACTTGGATGGTCCCAAATCCCCTCTATTTCAAGGTGCTGAAGCACAAAACCAGATCGTTCAACAACAACTGGGACTACATAGAAATGCAGATCCAGTTCAATCACAACCTCAGGAGAGCTCTGGGGATTCACAGATGTTTTTTAATCTTCCGCATTTGGACTCGTTTACGACCTCTGACTTGGCATTTTTTAAGAGTATTTAA
Protein Sequence MQPSSTSTSHYIQVPQKIQHKIAKKKITRRRRIDLDCGCSYYLSLNCHGCGFSHRGVHHCNSGAEWRLYLDGPKSPLFQGAEAQNQIVQQQLGLHRNADPVQSQPQESSGDSQMFFNLPHLDSFTTSDLAFFKSI

NCBI Accession YP_003254633.1
Location 1551-2600
Protein Name C1
Coding Region ATGCCACGTCATCCTTCTTTCTGTGTTAATGCTAAGAATATATTTCTCACATATCCCCAGTGTAGTCTGTCTAAAGAAACTGTTCTGGAGAAGACCCTAGGCATTTCATGCCCTTCCGAGAAACTCTTCGTTAGGGTTTCACAGGAAAAACACCAAGATGGGTCTCTGCACATCCATGCTTTGGTCCAATTCAAAGGTAAAGCCAAGTTTAGAAATGCAAGACATTTCGACATATCCCATCCTAATTCTAGCAGATCATTCCACCCCAATTTTCAGGGAGCAAGATCTTCGTCCGATATCAAGTCGTACATTCAGAAGGACGGCGATTACCTCGACTGGGGTTGTTTTCAGATCGATGGAAGATCTGCTAGAGGAGGTCAACAGGCAGCAAACGATGTTGTGGCAGCTGCTTTAAATGCTGCTTCCAAAGGGGAAGCTTTGAACATCATTAGAGAGAAACTTCCCAGAGACTTTCTATTTCAATTTCATAATTTAAATGCAAATCTAGATAAACTCTTTAAACCACAACAACAAATTTATGTCACTCCATTTAGTCGAGATTCATTTGATAATGTTCCTCATATATTGGAACAGTGGGCAAAAGAAAATGTTGTTGACGCCGCTGCGCGGCCATGGAGGCCCATAAGTATTGTGATTGAAGGTGCTTCTAGAACTGGTAAAACCATGTGGGCAAGATCTCTTGGTAGGCATAATTACTTGTGCGGCCATCTTGATCTTAGTCCAAAGGTGTATTGCAATGATGCTTGGTATAACGTCATTGATGACGTCGACCCGCATTACCTAAAACACTTTAAAGAGTTCATGGGGGCCCAGAGGGATTGGCAAAGCAACACAAAGTACGGAAAGCCAATTCAAATTAAAGGTGGCATTCCCACTATCTTCCTCTGCAATCCAGGCCCATCTTCTTCATATAAAGAATATCTGGAAGAAGAAAAAAATAAAGCACTAAAAGACTGGGCTACAAAAAATGCAACCTTCATCTACCTCAACGAGCCATTATATACAAGTACCACAGAAAATTCAACATAA
Protein Sequence MPRHPSFCVNAKNIFLTYPQCSLSKETVLEKTLGISCPSEKLFVRVSQEKHQDGSLHIHALVQFKGKAKFRNARHFDISHPNSSRSFHPNFQGARSSSDIKSYIQKDGDYLDWGCFQIDGRSARGGQQAANDVVAAALNAASKGEALNIIREKLPRDFLFQFHNLNANLDKLFKPQQQIYVTPFSRDSFDNVPHILEQWAKENVVDAAARPWRPISIVIEGASRTGKTMWARSLGRHNYLCGHLDLSPKVYCNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPSSSYKEYLEEEKNKALKDWATKNATFIYLNEPLYTSTTENST

NCBI Accession YP_003254634.1
Location 2186-2443
Protein Name C4
Coding Region ATGGGTCTCTGCACATCCATGCTTTGGTCCAATTCAAAGGTAAAGCCAAGTTTAGAAATGCAAGACATTTCGACATATCCCATCCTAATTCTAGCAGATCATTCCACCCCAATTTTCAGGGAGCAAGATCTTCGTCCGATATCAAGTCGTACATTCAGAAGGACGGCGATTACCTCGACTGGGGTTGTTTTCAGATCGATGGAAGATCTGCTAGAGGAGGTCAACAGGCAGCAAACGATGTTGTGGCAGCTGCTTTAA
Protein Sequence MGLCTSMLWSNSKVKPSLEMQDISTYPILILADHSTPIFREQDLRPISSRTFRRTAITSTGVVFRSMEDLLEEVNRQQTMLWQLL