Tomato leaf curl purple vein virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002270925.1
Isolate Brazil
Release date 2017/8/26
Submitter Macedo,M.A., Albuquerque,L., Souza,J., Maliano,M., Rojas,M., Gilbertson,R., Inoue Nagata,A.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_035481
ACCGGATGGCCGCGCCCCCGACCCGCTCCCGTGATTTGCGGCGCTTTGTCGTTTAAAAGTGGTCCCCACGCTGAAAACGACAAAATTGAACATCCAATCATAATTGAGCCTGAAAGCTTAGATATTTGAAATAGTCCTTGGTGGCTACGTTTGTACCTGTATAAAAAGACGAACGTCATACGGTCCCATCAGGCTTTAACTCAAAATGAGTAAGCGGGCAGCCCCATGGCGTTCCTTCGCGGGAATGTCAAAGGTACAGCGCTCCCTCAATTTTTCTCCTCGTTCGGGAACTGGGCCGAAATTAGACAGTCGGTCTGCTTGGGTCAACAGGCCCATGTATAGGAAGCCCAGGATCTATCGGACTTTGAGAAGTCCGGATGTTCCCAAGGGGTGTGAAGGCCCTTGCAAGGTCCAGTCCTATGAACAGAGGCATGATATCTCTCACGTGGGGAAGGTCATGTGCATCTCTGACGTGACGCGTGGGAATGGCATTACCCACCGCGTGGGTAAGAGGTTCTGCGTGAAGTCTGTGTACATATTAGGGAAGGTGTGGATGGACGAGAATATCAAGCTGAAGAATCACACGAACAGTGTGATGTTCTGGCTTGTCAGAGACAGGAGACCCTATGGAACGCCCATGGACTTTGGGCAGGTGTTCAACATGTTCGACAATGAGCCCAGTACTGCCACCGTGAAGAACGATCTCCGTGATCGTTTTCAGGTTCTGCACAAGTTCTACTCGAAGGTTACCGGTGGACAATATGCCAGCAACGAGCAGGCCCTGGTACGGCGTTTTTGGAGGGTGAACACCCATGTGACCTACAACCACCAGGAGGCCGCGAAGTACGAGAACCACACGGAGAATGCCCTCTTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCTACTCTCAAGATACGGATCTATTTTTATGATTCGATATCTAATTAATAAATATTATATTTTATTGAATGATTTTCGAGTACATGATTTACATACACTCTGTCCGTAGCAAACCTAACGGCTCTAATTACATTATTAATTGAAATGACTCCTAACTGATCTAAGTACAATAAAACTAAAAATCTAAATCTACTTAAATAAATCGTCCCAGAAGCCGTCAGATAACTGGTCCAGACTTGGAAGTTGAGGAAGGCTTTGTGGAGATCCAACGCTTTCCTCAGGTTGTGGTTGAACCGTATTTGGATGTGGTAGATCCTGGTTGTTGTGTAGAGTGGATCCTCCACGTGTGTTATCTTGAAATACAGGGGATTGCTGAGCTGCCAGATAAACACGCCATTCTCTGCCTGAGGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATTGTTGTGGCAGTTGATGTGTACGAATATGGAACACCCGCAGTTCAGATCTATCCTTCTCCTCCTAATCGCCCTCTTCTTGGCCGCCCTGTGATGGACTTTGATAGAGGGGGGAGTCGAGGAAGATGAATTTAGCATTATGGAGGGTCCAGTTCTTTAGAGAAACATTCTCTTGTTTCTCCAAAAAGTCCTTATAACTAGACCCTTCTCCTGGATTGCAGAGCACGATTGAGGGTATCCCTCCTTTAATTTGAACTGGCTTGCCGTATTTACAATTTGACTGCCAGTCCCTTTGGGCCCCAATCAGCTCTTTCCAGTGCTTCATCTTTAAATATTGCGGAGTGACGTCATCAATGACGTTATACTCCGCATCATTTGAGTAAACCCTAGAATTGAAATCCAGGTGTCCACTCAAATAATTGTGGGATCCTAGAGAACGGGCCCACATCGTCTTCCCCGTCCTTGAATCACCCTCGATGATTATACTAATAGGTCTTTCTGGCCGCGCAGCGGCATCCCTACCCAAATAATCATCAGCCCACTCTTGCATCTCCTCCGGAACGTTAGTGAAGGAGGAGAGGGGAAACGGAGGAGCCCAAGGCTCCGGAGCCTTCTGGAAAATGCGTTGCGCATTTGCCACGAGGTTGTGGTGTTGGAGGAAGAAGTGTTGTGGTTGTTCCTCCTTTATTATTTGGAGGGCTTCTTCTGCTGACGATGCATTTAACGCCTTGGCATATGTATCGTTAGCTGTCTGTTGACCTCCTCGAGCAGATCTTCCGTCGATCTGAAAATCACCCCACTCGACGTAATCTCCGTCCTTCTCAATGTATGATTTGGCGTCTGAGGAGGACTTGCAAGATTCGTATTTTCCATGACAAACATTGGAATTACTGGGATGTCGCAAGTCGAAGAATCTGCAATTCGTGCAGACGAACTTGGCTTCGAATTGCAGCAGGGCATGCAGATGAGGTTCCCCATTATCATGTAGCTCTCTGCAGACTCTGATATATTTTTTGTTGACTGGGGTTTCTAGGGCTTGCAATTGGGAAAGTGCCTCTTCTTTCGAAATAGAGCATTTGGGATAAGTGAGGAAATAGTTTTTGGAAGAAATACGGAATCGTTTTGGTGGTGGCATTTTTGTAATAACAAGGGTGTCACCGATTGAGATTCAGGTAAACTTGCGGAATGAATTGGTGACTAGTGACAATTTATAGTAGAATCCTCAATAGAACTCCGAATCATGTTCGCACACGTGGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009408629.1
Location 206-961
Gene Name CP
Protein Name coat protein
Coding Region ATGAGTAAGCGGGCAGCCCCATGGCGTTCCTTCGCGGGAATGTCAAAGGTACAGCGCTCCCTCAATTTTTCTCCTCGTTCGGGAACTGGGCCGAAATTAGACAGTCGGTCTGCTTGGGTCAACAGGCCCATGTATAGGAAGCCCAGGATCTATCGGACTTTGAGAAGTCCGGATGTTCCCAAGGGGTGTGAAGGCCCTTGCAAGGTCCAGTCCTATGAACAGAGGCATGATATCTCTCACGTGGGGAAGGTCATGTGCATCTCTGACGTGACGCGTGGGAATGGCATTACCCACCGCGTGGGTAAGAGGTTCTGCGTGAAGTCTGTGTACATATTAGGGAAGGTGTGGATGGACGAGAATATCAAGCTGAAGAATCACACGAACAGTGTGATGTTCTGGCTTGTCAGAGACAGGAGACCCTATGGAACGCCCATGGACTTTGGGCAGGTGTTCAACATGTTCGACAATGAGCCCAGTACTGCCACCGTGAAGAACGATCTCCGTGATCGTTTTCAGGTTCTGCACAAGTTCTACTCGAAGGTTACCGGTGGACAATATGCCAGCAACGAGCAGGCCCTGGTACGGCGTTTTTGGAGGGTGAACACCCATGTGACCTACAACCACCAGGAGGCCGCGAAGTACGAGAACCACACGGAGAATGCCCTCTTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCTACTCTCAAGATACGGATCTATTTTTATGATTCGATATCTAATTAA
Protein Sequence MSKRAAPWRSFAGMSKVQRSLNFSPRSGTGPKLDSRSAWVNRPMYRKPRIYRTLRSPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKVWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVLHKFYSKVTGGQYASNEQALVRRFWRVNTHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSISN

NCBI Accession YP_009408630.1
Location 539-814
Gene Name AC5
Protein Name AC5
Coding Region ATGGGTGTTCACCCTCCAAAAACGCCGTACCAGGGCCTGCTCGTTGCTGGCATATTGTCCACCGGTAACCTTCGAGTAGAACTTGTGCAGAACCTGAAAACGATCACGGAGATCGTTCTTCACGGTGGCAGTACTGGGCTCATTGTCGAACATGTTGAACACCTGCCCAAAGTCCATGGGCGTTCCATAGGGTCTCCTGTCTCTGACAAGCCAGAACATCACACTGTTCGTGTGATTCTTCAGCTTGATATTCTCGTCCATCCACACCTTCCCTAA
Protein Sequence MGVHPPKTPYQGLLVAGILSTGNLRVELVQNLKTITEIVLHGGSTGLIVEHVEHLPKVHGRSIGSPVSDKPEHHTVRVILQLDILVHPHLP

NCBI Accession YP_009408631.1
Location 958-1356
Gene Name REn
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCACCTCAGGCAGAGAATGGCGTGTTTATCTGGCAGCTCAGCAATCCCCTGTATTTCAAGATAACACACGTGGAGGATCCACTCTACACAACAACCAGGATCTACCACATCCAAATACGGTTCAACCACAACCTGAGGAAAGCGTTGGATCTCCACAAAGCCTTCCTCAACTTCCAAGTCTGGACCAGTTATCTGACGGCTTCTGGGACGATTTATTTAAGTAGATTTAGATTTTTAGTTTTATTGTACTTAGATCAGTTAGGAGTCATTTCAATTAATAATGTAATTAGAGCCGTTAGGTTTGCTACGGACAGAGTGTATGTAAATCATGTACTCGAAAATCATTCAATAAAATATAATATTTATTAA
Protein Sequence MDSRTGELITAPQAENGVFIWQLSNPLYFKITHVEDPLYTTTRIYHIQIRFNHNLRKALDLHKAFLNFQVWTSYLTASGTIYLSRFRFLVLLYLDQLGVISINNVIRAVRFATDRVYVNHVLENHSIKYNIY

NCBI Accession YP_009408632.1
Location 1103-1492
Gene Name TrAP
Protein Name transcriptional activator protein
Coding Region ATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAAGTCCATCACAGGGCGGCCAAGAAGAGGGCGATTAGGAGGAGAAGGATAGATCTGAACTGCGGGTGTTCCATATTCGTACACATCAACTGCCACAACAATGGATTCACGCACAGGGGAACTCATCACTGCACCTCAGGCAGAGAATGGCGTGTTTATCTGGCAGCTCAGCAATCCCCTGTATTTCAAGATAACACACGTGGAGGATCCACTCTACACAACAACCAGGATCTACCACATCCAAATACGGTTCAACCACAACCTGAGGAAAGCGTTGGATCTCCACAAAGCCTTCCTCAACTTCCAAGTCTGGACCAGTTATCTGACGGCTTCTGGGACGATTTATTTAAGTAG
Protein Sequence MLNSSSSTPPSIKVHHRAAKKRAIRRRRIDLNCGCSIFVHINCHNNGFTHRGTHHCTSGREWRVYLAAQQSPVFQDNTRGGSTLHNNQDLPHPNTVQPQPEESVGSPQSLPQLPSLDQLSDGFWDDLFK

NCBI Accession YP_009408633.1
Location 1419-2489
Gene Name Rep
Protein Name replication protein
Coding Region ATGCCACCACCAAAACGATTCCGTATTTCTTCCAAAAACTATTTCCTCACTTATCCCAAATGCTCTATTTCGAAAGAAGAGGCACTTTCCCAATTGCAAGCCCTAGAAACCCCAGTCAACAAAAAATATATCAGAGTCTGCAGAGAGCTACATGATAATGGGGAACCTCATCTGCATGCCCTGCTGCAATTCGAAGCCAAGTTCGTCTGCACGAATTGCAGATTCTTCGACTTGCGACATCCCAGTAATTCCAATGTTTGTCATGGAAAATACGAATCTTGCAAGTCCTCCTCAGACGCCAAATCATACATTGAGAAGGACGGAGATTACGTCGAGTGGGGTGATTTTCAGATCGACGGAAGATCTGCTCGAGGAGGTCAACAGACAGCTAACGATACATATGCCAAGGCGTTAAATGCATCGTCAGCAGAAGAAGCCCTCCAAATAATAAAGGAGGAACAACCACAACACTTCTTCCTCCAACACCACAACCTCGTGGCAAATGCGCAACGCATTTTCCAGAAGGCTCCGGAGCCTTGGGCTCCTCCGTTTCCCCTCTCCTCCTTCACTAACGTTCCGGAGGAGATGCAAGAGTGGGCTGATGATTATTTGGGTAGGGATGCCGCTGCGCGGCCAGAAAGACCTATTAGTATAATCATCGAGGGTGATTCAAGGACGGGGAAGACGATGTGGGCCCGTTCTCTAGGATCCCACAATTATTTGAGTGGACACCTGGATTTCAATTCTAGGGTTTACTCAAATGATGCGGAGTATAACGTCATTGATGACGTCACTCCGCAATATTTAAAGATGAAGCACTGGAAAGAGCTGATTGGGGCCCAAAGGGACTGGCAGTCAAATTGTAAATACGGCAAGCCAGTTCAAATTAAAGGAGGGATACCCTCAATCGTGCTCTGCAATCCAGGAGAAGGGTCTAGTTATAAGGACTTTTTGGAGAAACAAGAGAATGTTTCTCTAAAGAACTGGACCCTCCATAATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAAGTCCATCACAGGGCGGCCAAGAAGAGGGCGATTAG
Protein Sequence MPPPKRFRISSKNYFLTYPKCSISKEEALSQLQALETPVNKKYIRVCRELHDNGEPHLHALLQFEAKFVCTNCRFFDLRHPSNSNVCHGKYESCKSSSDAKSYIEKDGDYVEWGDFQIDGRSARGGQQTANDTYAKALNASSAEEALQIIKEEQPQHFFLQHHNLVANAQRIFQKAPEPWAPPFPLSSFTNVPEEMQEWADDYLGRDAAARPERPISIIIEGDSRTGKTMWARSLGSHNYLSGHLDFNSRVYSNDAEYNVIDDVTPQYLKMKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLEKQENVSLKNWTLHNAKFIFLDSPLYQSPSQGGQEEGD

NCBI Accession YP_009408634.1
Location 2075-2338
Gene Name AC4
Protein Name AC4
Coding Region ATGATAATGGGGAACCTCATCTGCATGCCCTGCTGCAATTCGAAGCCAAGTTCGTCTGCACGAATTGCAGATTCTTCGACTTGCGACATCCCAGTAATTCCAATGTTTGTCATGGAAAATACGAATCTTGCAAGTCCTCCTCAGACGCCAAATCATACATTGAGAAGGACGGAGATTACGTCGAGTGGGGTGATTTTCAGATCGACGGAAGATCTGCTCGAGGAGGTCAACAGACAGCTAACGATACATATGCCAAGGCGTTAA
Protein Sequence MIMGNLICMPCCNSKPSSSARIADSSTCDIPVIPMFVMENTNLASPPQTPNHTLRRTEITSSGVIFRSTEDLLEEVNRQLTIHMPRR