Tomato leaf curl Mahe virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_013088145.1
Isolate Seychelles
Release date 2021/6/1
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055498
ACCGGATGGCCGCGCCCCCAAAAAAAGAAGTGGGCCCCGTGCACTAAGAGGGCCCCGCGCACTACCTCTATCGGCCAATCAGATAGGCGAGTCATAGCTTAGTTATTTGAATGGTTGTCTTTATATACTTGCTGGCGAAGTAGTTGGCTTTGTCAGTATGTGGGACCCACTTTTAAACGAGTTCCCAGACTCTGTTCACGGGTTCCGTTGTATGCTTGCTATTAAATATTTGCAGGCCGTGGAAGAAACTTACGAGCCCAACACACTGGGTTACGATCTAATCCGTGATCTTTTCGGTGTTATTAGGGCCCGTGATTATGTCCAAGCGACCCGGAGATATAATCATTTCCACACCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCTTACACGAACCGTGCTGCTGCCCCCACTGTCCGCGTCACCAGAAGCAGAATATGGGCCAACAGGCCCATTTATCGGAAGCCCAGGATGTACAGAATGTATCGAAGCCCAGATGTCCCTAAGGGCTGTGAAGGCCCATGTAAGGTCCAATCGTATGAGCAGAGGGATGATGTCAAGCATACCGGTATTGTTCGTTGTGTTAGTGATGTTACCCGTGGGTCGGGTATTACTCATAGAGTTGGCAAGAGGTTTTGTGTTAAGTCTATATACATTTTAGGTAAGATCTGGATGGATGATAATATCAAAAAGCAGAATCATACTAATCAGGTTATGTTTTTCCTTGTTCGTGATAGAAGGCCCTATGGCTTGTCCCCAATGGATTTTGGACAGGTGTTCAACATGTTTGATAATGAGCCCAGTACAGCTACCGTGAAGAATGATTTGAGAGACAGATATCAGGTCATGAGGAAATTTCATGCAACTGTTGTTGGTGGGCCCTCAGGGATGAAGGAACAGGCATTAGTTAAGAGATTTTTTAGGATTAATAGCCACGTAACATATAATCATCAGGAGGCAGCTAAATACGAGAATCATACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAATCCAGTGTATGCTACTCTTAAGATACGGATCTATTTCTATGATTCGATCGGTAATTAATAAATATTAAATTTTATTTCATGGTTCTCCGTAACTTGGAGTGTATTTACAAATACATCGTGTAATACATAATCAACTGCTCTAATTATTGCATTAATTGAAATGACACCTAAAGAATCTAAATACTTGAGAACTTGGGTCCTAAATACGCTTAAGAAACGACCAGTCTGAGGGCGTAAGCTCGTCCAGACCTTGAAGTTCAGAAAACACTTGTGAATCTCCAACACCTTCCTTAGGTTGTGGTTGAACCGTATCTGGATTGATATGATGTCGTGGTTCGTGTTGAATGCCCGGCTGTCGTGATTGATTATCTTGAAATAGAGGGGATTTTGTATCTCCCAGATAAACACGCCACTCTGTGCTTGAGCTGCAGTAATGAGTTCCCCGGTGCGTAAATCCATAGTTCGCACAGTTAACGTGAATATAGTATGAGCAGCCGCAGCCTAGGTCTATGCGCTTACGTCGGATGGCTCTAGTCTTCGCTATGCGGTGTTGGACCTTGATTGGTATTTGTGAACAATGGCTTGTGGAGGGAGACGAAGGTTGCATTCTTGATGGCCCAGTCTTTTAGTTGTGTATGTTTCTCCTCGTCTAGATATTCTTTATACGAGGATGTTGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAATGGGCTTCCCGTACTTGGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCTTTAAAATGCTTTAGATAATGCGGGTCTACGTCATCAATGACGTTGTACCACGCATCATTGCTGTACACCTTTGGACTCAGGTCAAGATGACCACACAAATAGTTGTGGGGTCCTAATGACCTGGCCCACATCGTCTTGCCGGTTCGACTATCACCCTCAATAACAATACTAATCGGTCTCCACGGCCGCGCAGCGGCATCCATGACATTCTCAGCCACCCATACTTCAAGTTCGTCCGGAACCTGATTAAAAGAAGAAGAAAGAAAAGGAGAAACATAAGGAGCCGGAGGCTCCTGAAAAATCCTATTTGCGTTAGCAGATATATTATGGAACTGTAAAAAAAAGGACTTGGGATCTTTTTCTTTAATTATTTGAAGAGCTTCTGATTTAGAAGAAGCGTTCAATGCGTCTGCATATACTTCGGCTAAATGCTGGCCCTCCCCCCTTGCACTTCTGGCATCGACCTGGAAAATTCCATCGTCAAGAAATTCCCCTCCCTTTTCAATGTAGGCTTTGACATCGGACGATGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGTTGATCTGGAAGGGGAAATGAGATCGAAGAATCTCTGGTTTGTACATTGGAACTTGCCTTCGAATTGGATGAGAACATGGAGATGAGGCACCCCATCCTGATGTAGTTCTCTGCAAACCCTAATGAATTTGATATTCGTCGGGTAAGAAAGCGTTTTCAATTGGGAAAGGGCCTCTTCCTTTGTTAATGAGCATTTGGGATAGGTGATGAAATAATTTTTGGCATGTATTTGAAAACGACCTGCTCTTGGCATATTTTCTGTCGTTTTGGATTGGTGGACACTCAAAACTCCATGATAACGGTGGAATGGTGGGCAATATATATGATGTCCACCAATGGCATATGTGTAAATAGGTAGACTTCCATTTGAAATTTGTAATTTCAAAATTCCCAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_010086863.1
Location 158-514
Protein Name movement protein
Coding Region ATGTGGGACCCACTTTTAAACGAGTTCCCAGACTCTGTTCACGGGTTCCGTTGTATGCTTGCTATTAAATATTTGCAGGCCGTGGAAGAAACTTACGAGCCCAACACACTGGGTTACGATCTAATCCGTGATCTTTTCGGTGTTATTAGGGCCCGTGATTATGTCCAAGCGACCCGGAGATATAATCATTTCCACACCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCTTACACGAACCGTGCTGCTGCCCCCACTGTCCGCGTCACCAGAAGCAGAATATGGGCCAACAGGCCCATTTATCGGAAGCCCAGGATGTACAGAATGTATCGAAGCCCAGATGTCCCTAA
Protein Sequence MWDPLLNEFPDSVHGFRCMLAIKYLQAVEETYEPNTLGYDLIRDLFGVIRARDYVQATRRYNHFHTRLEGSSKAELRQPLHEPCCCPHCPRHQKQNMGQQAHLSEAQDVQNVSKPRCP

NCBI Accession YP_010086864.1
Location 318-1091
Protein Name capsid protein
Coding Region ATGTCCAAGCGACCCGGAGATATAATCATTTCCACACCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCTTACACGAACCGTGCTGCTGCCCCCACTGTCCGCGTCACCAGAAGCAGAATATGGGCCAACAGGCCCATTTATCGGAAGCCCAGGATGTACAGAATGTATCGAAGCCCAGATGTCCCTAAGGGCTGTGAAGGCCCATGTAAGGTCCAATCGTATGAGCAGAGGGATGATGTCAAGCATACCGGTATTGTTCGTTGTGTTAGTGATGTTACCCGTGGGTCGGGTATTACTCATAGAGTTGGCAAGAGGTTTTGTGTTAAGTCTATATACATTTTAGGTAAGATCTGGATGGATGATAATATCAAAAAGCAGAATCATACTAATCAGGTTATGTTTTTCCTTGTTCGTGATAGAAGGCCCTATGGCTTGTCCCCAATGGATTTTGGACAGGTGTTCAACATGTTTGATAATGAGCCCAGTACAGCTACCGTGAAGAATGATTTGAGAGACAGATATCAGGTCATGAGGAAATTTCATGCAACTGTTGTTGGTGGGCCCTCAGGGATGAAGGAACAGGCATTAGTTAAGAGATTTTTTAGGATTAATAGCCACGTAACATATAATCATCAGGAGGCAGCTAAATACGAGAATCATACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAATCCAGTGTATGCTACTCTTAAGATACGGATCTATTTCTATGATTCGATCGGTAATTAA
Protein Sequence MSKRPGDIIISTPVSKVRRRLNFDSPYTNRAAAPTVRVTRSRIWANRPIYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGSGITHRVGKRFCVKSIYILGKIWMDDNIKKQNHTNQVMFFLVRDRRPYGLSPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMRKFHATVVGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN

NCBI Accession YP_010086865.1
Location 1088-1492
Protein Name replication enhancer protein
Coding Region ATGGATTTACGCACCGGGGAACTCATTACTGCAGCTCAAGCACAGAGTGGCGTGTTTATCTGGGAGATACAAAATCCCCTCTATTTCAAGATAATCAATCACGACAGCCGGGCATTCAACACGAACCACGACATCATATCAATCCAGATACGGTTCAACCACAACCTAAGGAAGGTGTTGGAGATTCACAAGTGTTTTCTGAACTTCAAGGTCTGGACGAGCTTACGCCCTCAGACTGGTCGTTTCTTAAGCGTATTTAGGACCCAAGTTCTCAAGTATTTAGATTCTTTAGGTGTCATTTCAATTAATGCAATAATTAGAGCAGTTGATTATGTATTACACGATGTATTTGTAAATACACTCCAAGTTACGGAGAACCATGAAATAAAATTTAATATTTATTAA
Protein Sequence MDLRTGELITAAQAQSGVFIWEIQNPLYFKIINHDSRAFNTNHDIISIQIRFNHNLRKVLEIHKCFLNFKVWTSLRPQTGRFLSVFRTQVLKYLDSLGVISINAIIRAVDYVLHDVFVNTLQVTENHEIKFNIY

NCBI Accession YP_010086866.1
Location 1233-1640
Protein Name transcriptional activator protein
Coding Region ATGCAACCTTCGTCTCCCTCCACAAGCCATTGTTCACAAATACCAATCAAGGTCCAACACCGCATAGCGAAGACTAGAGCCATCCGACGTAAGCGCATAGACCTAGGCTGCGGCTGCTCATACTATATTCACGTTAACTGTGCGAACTATGGATTTACGCACCGGGGAACTCATTACTGCAGCTCAAGCACAGAGTGGCGTGTTTATCTGGGAGATACAAAATCCCCTCTATTTCAAGATAATCAATCACGACAGCCGGGCATTCAACACGAACCACGACATCATATCAATCCAGATACGGTTCAACCACAACCTAAGGAAGGTGTTGGAGATTCACAAGTGTTTTCTGAACTTCAAGGTCTGGACGAGCTTACGCCCTCAGACTGGTCGTTTCTTAAGCGTATTTAG
Protein Sequence MQPSSPSTSHCSQIPIKVQHRIAKTRAIRRKRIDLGCGCSYYIHVNCANYGFTHRGTHYCSSSTEWRVYLGDTKSPLFQDNQSRQPGIQHEPRHHINPDTVQPQPKEGVGDSQVFSELQGLDELTPSDWSFLKRI

NCBI Accession YP_010086867.1
Location 1564-2628
Protein Name replication associated protein
Coding Region ATGCCAAGAGCAGGTCGTTTTCAAATACATGCCAAAAATTATTTCATCACCTATCCCAAATGCTCATTAACAAAGGAAGAGGCCCTTTCCCAATTGAAAACGCTTTCTTACCCGACGAATATCAAATTCATTAGGGTTTGCAGAGAACTACATCAGGATGGGGTGCCTCATCTCCATGTTCTCATCCAATTCGAAGGCAAGTTCCAATGTACAAACCAGAGATTCTTCGATCTCATTTCCCCTTCCAGATCAACACATTTCCATCCGAACATTCAGGGAGCTAAATCATCGTCCGATGTCAAAGCCTACATTGAAAAGGGAGGGGAATTTCTTGACGATGGAATTTTCCAGGTCGATGCCAGAAGTGCAAGGGGGGAGGGCCAGCATTTAGCCGAAGTATATGCAGACGCATTGAACGCTTCTTCTAAATCAGAAGCTCTTCAAATAATTAAAGAAAAAGATCCCAAGTCCTTTTTTTTACAGTTCCATAATATATCTGCTAACGCAAATAGGATTTTTCAGGAGCCTCCGGCTCCTTATGTTTCTCCTTTTCTTTCTTCTTCTTTTAATCAGGTTCCGGACGAACTTGAAGTATGGGTGGCTGAGAATGTCATGGATGCCGCTGCGCGGCCGTGGAGACCGATTAGTATTGTTATTGAGGGTGATAGTCGAACCGGCAAGACGATGTGGGCCAGGTCATTAGGACCCCACAACTATTTGTGTGGTCATCTTGACCTGAGTCCAAAGGTGTACAGCAATGATGCGTGGTACAACGTCATTGATGACGTAGACCCGCATTATCTAAAGCATTTTAAAGAATTCATGGGGGCCCAGAGGGACTGGCAAAGCAACACCAAGTACGGGAAGCCCATTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCAACATCCTCGTATAAAGAATATCTAGACGAGGAGAAACATACACAACTAAAAGACTGGGCCATCAAGAATGCAACCTTCGTCTCCCTCCACAAGCCATTGTTCACAAATACCAATCAAGGTCCAACACCGCATAGCGAAGACTAG
Protein Sequence MPRAGRFQIHAKNYFITYPKCSLTKEEALSQLKTLSYPTNIKFIRVCRELHQDGVPHLHVLIQFEGKFQCTNQRFFDLISPSRSTHFHPNIQGAKSSSDVKAYIEKGGEFLDDGIFQVDARSARGEGQHLAEVYADALNASSKSEALQIIKEKDPKSFFLQFHNISANANRIFQEPPAPYVSPFLSSSFNQVPDELEVWVAENVMDAAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKHTQLKDWAIKNATFVSLHKPLFTNTNQGPTPHSED

NCBI Accession YP_010086868.1
Location 2238-2471
Protein Name C4 protein
Coding Region ATGGGGTGCCTCATCTCCATGTTCTCATCCAATTCGAAGGCAAGTTCCAATGTACAAACCAGAGATTCTTCGATCTCATTTCCCCTTCCAGATCAACACATTTCCATCCGAACATTCAGGGAGCTAAATCATCGTCCGATGTCAAAGCCTACATTGAAAAGGGAGGGGAATTTCTTGACGATGGAATTTTCCAGGTCGATGCCAGAAGTGCAAGGGGGGAGGGCCAGCATTTAG
Protein Sequence MGCLISMFSSNSKASSNVQTRDSSISFPLPDQHISIRTFRELNHRPMSKPTLKREGNFLTMEFSRSMPEVQGGRASI