Tomato leaf curl Kunene virus


Basic Information

Genus Begomovirus
Isolate NA-2019
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

MT045996
ACCGGATGGCCGCGCCCTCATTTACAAAAGTAGTGGTGACAGGGACCACCACTAATAATTGTCGACCAATAAGATTTCAGCCTGAAAGCTAATTGGTTTAGTTTTGTCTTTATATACTTGGTGCCTAAGGATATTTTGAACTAAGTGGGAGCCACCCAAGCACGAGCTTGCCGTCGGTGCTTTTATGTGGGATCCATTATTACACGAGCTGCCGGAATCGGTGCACGGATTCCGGTGTATGCTTGCAAACAAATATCTTCAAGCCGTCGAAGAAACTTACGAGCCTAATACGCTAGGTTGGGAGTTAATTAGAGACCTTCTATCTGTCATCCGATCTAAAGATTATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCCTCGAAGGTTCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGTTGCTGTCCCCATTGCCCCAGGCATAAACAAACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGAATGTACAGAATGTACAAAAGCCCTGATGTTCCTCGGGGTTGTGAAGGCCCATGTAAGATACAGTCATTTGATCAGCGTGATTCTGTTGTCCATACGGGTACTGTTAGGTGTCTCAGCGATGTCACTAGGGGTGGTGGTCTTACACATCGCACTGGTAAACGCTTTTGTATTAAGTCTATATATGTATTAGGTAAGGTCTGGATGGACGAGAACGTGAAGAAGTCTAACCATACGAACACATGTATGTTTTGGGTAGTTAGAGATAGGCGCCCTTATGGGCCAAGCCCACAGGATTTTGGTCAGGTGTTTAACATGTTTGATAATGAGCCCAGTACTGCCACGGTTCAGAACGATAAGCGTGATCGCTATCAAGTTCTACGTAGATTTCAGGTAACTGTAACGGGAGGCCCGTCAGGATGTAAGGAGGCTGCCATCGTTAAGAGATTTTTCCGTTTGAATCATCATGTTACTTACAACCATCAAGAGGCCGCAAAATACGAGAATCATACGGAGAATGCTTTATTATTGTATATGGCATGTACACATGCCTCTAACCCTGTATATGCAAGTCTAAAGATACGTATGTATTTCTATGATTCAGTTGGCAATTAATAAAGATCAAATTTTATATCATGATTCTCCCAAACATCTATTGTATTTACAAGTACATTATTTAATACATGATTGACCGCTCTAATTATAAAATTAATTGAAATTACACCAATTTGATCTAAATATTTCATTACTTGTGTTCTAAATACATTTAAGAAACGACCAGTCTGAGGACGTAAGCCCGTCCAGATCTGGAAGTTCAGAAAACATTTGTGAATCCCCAAAGCCCTCCTGAGGTTGTGGTTGAACCGTATTTGTATTGATATGATGTCGTGGTTGCATTGGAATGGCCTCTGGACGTGTCTCGTTATCTTGAAGTACAGGGGATTGGGTACTTCCCAGAAGAAGACGCCATTCCATGCTTGATGAGCAGTGATGTCTTCCCCTGTGCGCAAATCCATTTAAGGCGCAGTTGATGTGTATGAAGAATGAACAGCCACAATCTAGGTCAATCCTCTTCCGTCGCACCGCTTTCGCCTTGCCAATTTTGTGACGTACCTTTATTGGAACCTGAGTAGAGCGGCTCGTAGATGGTGACGAAGATCGCATTCTTGATAGTCCAGGCTTTCAGTGCTGCATTTTTTTCTTCGTCAAGATATTCTTTATATGATGATGTTGGTCCAGGATTGCAGAGGAAGATAGTGGGTATTCCCCCTTTAATTTGAATTGGCTTTCCGTATTTTGTGTTACTTTGCCAGTCTCTTTGGGCCCCCATAAATTCTTTGAAGTGTTTGAGGTAATGCGGATCAACGTCATCAATGACGTTGAACCATGCGTCGTTGGAATATACCTTTGGGCTTAGATCAAGATGCCCACACAAATAATTGTGTGGTCCTAATGACCTAGCCCACATTGTTTTTCCTGTACGACTATCACCCTCAATTACTATACTTATGGGCCTAATAGGCCGCGCAGCGGAACACACAACATTTTCAGCAGCCCATTCTTCAAGTTCCTGAGGGACTTGATCATAGGAAGAAGAAAGAAAAGGAGAAACATAAGGAGTCGGAGGCTCCTGAAAAATTCTATCTAAATTCGATTTTAAATTATGATATTGAAATATAAAATCTTTAGGGAGTTTCTCTCTAATAATAGCCATAGCAGCTTCAGCGGACCCTGCATTTAGGGCTTCTGCGGCGGCGTCATTAGCATTCTGACAACCTCCTCTAGCACTTCGTCCGTCGATTTGGAACTCTCCCCATTCGAGTGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCGGAACTTGATTTAGCTCCCTGAACGTTCGGATGGAAATGTGTTGACCTGGTTGGGGATACCAGGTCGAAGAATCTTTGATTCTTGCAGTTGAATTTACCCTCGAATTGGATAAGCACGTGGAGATGAGGCTCCCCATCTTCGTGAAGCTCTCGACAGACTTTTATATATTTTTTGTTCGTTGGTGTTTCTAGTTTTTGAAGTTGCTCTAGGGCTTCTTCCTTTGTAAGAGAACATTTTGGGAAAGTGAGGAAATAGTTTTTCGAATTTATTCGAAAATGCTTAGGAGGAGGCATTTGGTCAATGGGCACCGATTGACCTTATATTTCATTTACCCCATTATATTGGGGTCCTATATATACTATGCCCCAAATGGCATATATGTAAATTTGAAAAGATATAACTTTAATTTAAATCTTGTAGCGGCCATCCGTCTAATATT

Gene Information

NCBI Accession QKE61400.1
Location 185-535
Protein Name movement protein
Coding Region ATGTGGGATCCATTATTACACGAGCTGCCGGAATCGGTGCACGGATTCCGGTGTATGCTTGCAAACAAATATCTTCAAGCCGTCGAAGAAACTTACGAGCCTAATACGCTAGGTTGGGAGTTAATTAGAGACCTTCTATCTGTCATCCGATCTAAAGATTATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCCTCGAAGGTTCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGTTGCTGTCCCCATTGCCCCAGGCATAAACAAACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGAATGTACAGAATGTACAAAAGCCCTGA
Protein Sequence MWDPLLHELPESVHGFRCMLANKYLQAVEETYEPNTLGWELIRDLLSVIRSKDYVEATRRYNHFHARLEGSSKAEFRQPIHQPCCCPHCPRHKQTSIMDVQAHVSKAQNVQNVQKP

NCBI Accession QKE61399.1
Location 345-1121
Protein Name coat protein
Coding Region ATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCCTCGAAGGTTCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGTTGCTGTCCCCATTGCCCCAGGCATAAACAAACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGAATGTACAGAATGTACAAAAGCCCTGATGTTCCTCGGGGTTGTGAAGGCCCATGTAAGATACAGTCATTTGATCAGCGTGATTCTGTTGTCCATACGGGTACTGTTAGGTGTCTCAGCGATGTCACTAGGGGTGGTGGTCTTACACATCGCACTGGTAAACGCTTTTGTATTAAGTCTATATATGTATTAGGTAAGGTCTGGATGGACGAGAACGTGAAGAAGTCTAACCATACGAACACATGTATGTTTTGGGTAGTTAGAGATAGGCGCCCTTATGGGCCAAGCCCACAGGATTTTGGTCAGGTGTTTAACATGTTTGATAATGAGCCCAGTACTGCCACGGTTCAGAACGATAAGCGTGATCGCTATCAAGTTCTACGTAGATTTCAGGTAACTGTAACGGGAGGCCCGTCAGGATGTAAGGAGGCTGCCATCGTTAAGAGATTTTTCCGTTTGAATCATCATGTTACTTACAACCATCAAGAGGCCGCAAAATACGAGAATCATACGGAGAATGCTTTATTATTGTATATGGCATGTACACATGCCTCTAACCCTGTATATGCAAGTCTAAAGATACGTATGTATTTCTATGATTCAGTTGGCAATTAA
Protein Sequence MSKRPADIIISTPASKVRRRLNFDSPYTNRVAVPIAPGINKRRSWTYRPMYRKPRMYRMYKSPDVPRGCEGPCKIQSFDQRDSVVHTGTVRCLSDVTRGGGLTHRTGKRFCIKSIYVLGKVWMDENVKKSNHTNTCMFWVVRDRRPYGPSPQDFGQVFNMFDNEPSTATVQNDKRDRYQVLRRFQVTVTGGPSGCKEAAIVKRFFRLNHHVTYNHQEAAKYENHTENALLLYMACTHASNPVYASLKIRMYFYDSVGN

NCBI Accession QKE61403.1
Location 1118-1522
Protein Name replication enhancer protein
Coding Region ATGGATTTGCGCACAGGGGAAGACATCACTGCTCATCAAGCATGGAATGGCGTCTTCTTCTGGGAAGTACCCAATCCCCTGTACTTCAAGATAACGAGACACGTCCAGAGGCCATTCCAATGCAACCACGACATCATATCAATACAAATACGGTTCAACCACAACCTCAGGAGGGCTTTGGGGATTCACAAATGTTTTCTGAACTTCCAGATCTGGACGGGCTTACGTCCTCAGACTGGTCGTTTCTTAAATGTATTTAGAACACAAGTAATGAAATATTTAGATCAAATTGGTGTAATTTCAATTAATTTTATAATTAGAGCGGTCAATCATGTATTAAATAATGTACTTGTAAATACAATAGATGTTTGGGAGAATCATGATATAAAATTTGATCTTTATTAA
Protein Sequence MDLRTGEDITAHQAWNGVFFWEVPNPLYFKITRHVQRPFQCNHDIISIQIRFNHNLRRALGIHKCFLNFQIWTGLRPQTGRFLNVFRTQVMKYLDQIGVISINFIIRAVNHVLNNVLVNTIDVWENHDIKFDLY

NCBI Accession QKE61402.1
Location 1263-1670
Protein Name transcriptional activator protein
Coding Region ATGCGATCTTCGTCACCATCTACGAGCCGCTCTACTCAGGTTCCAATAAAGGTACGTCACAAAATTGGCAAGGCGAAAGCGGTGCGACGGAAGAGGATTGACCTAGATTGTGGCTGTTCATTCTTCATACACATCAACTGCGCCTTAAATGGATTTGCGCACAGGGGAAGACATCACTGCTCATCAAGCATGGAATGGCGTCTTCTTCTGGGAAGTACCCAATCCCCTGTACTTCAAGATAACGAGACACGTCCAGAGGCCATTCCAATGCAACCACGACATCATATCAATACAAATACGGTTCAACCACAACCTCAGGAGGGCTTTGGGGATTCACAAATGTTTTCTGAACTTCCAGATCTGGACGGGCTTACGTCCTCAGACTGGTCGTTTCTTAAATGTATTTAG
Protein Sequence MRSSSPSTSRSTQVPIKVRHKIGKAKAVRRKRIDLDCGCSFFIHINCALNGFAHRGRHHCSSSMEWRLLLGSTQSPVLQDNETRPEAIPMQPRHHINTNTVQPQPQEGFGDSQMFSELPDLDGLTSSDWSFLKCI

NCBI Accession QKE61401.1
Location 1570-2658
Protein Name replication associated protein
Coding Region ATGCCTCCTCCTAAGCATTTTCGAATAAATTCGAAAAACTATTTCCTCACTTTCCCAAAATGTTCTCTTACAAAGGAAGAAGCCCTAGAGCAACTTCAAAAACTAGAAACACCAACGAACAAAAAATATATAAAAGTCTGTCGAGAGCTTCACGAAGATGGGGAGCCTCATCTCCACGTGCTTATCCAATTCGAGGGTAAATTCAACTGCAAGAATCAAAGATTCTTCGACCTGGTATCCCCAACCAGGTCAACACATTTCCATCCGAACGTTCAGGGAGCTAAATCAAGTTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTCGAATGGGGAGAGTTCCAAATCGACGGACGAAGTGCTAGAGGAGGTTGTCAGAATGCTAATGACGCCGCCGCAGAAGCCCTAAATGCAGGGTCCGCTGAAGCTGCTATGGCTATTATTAGAGAGAAACTCCCTAAAGATTTTATATTTCAATATCATAATTTAAAATCGAATTTAGATAGAATTTTTCAGGAGCCTCCGACTCCTTATGTTTCTCCTTTTCTTTCTTCTTCCTATGATCAAGTCCCTCAGGAACTTGAAGAATGGGCTGCTGAAAATGTTGTGTGTTCCGCTGCGCGGCCTATTAGGCCCATAAGTATAGTAATTGAGGGTGATAGTCGTACAGGAAAAACAATGTGGGCTAGGTCATTAGGACCACACAATTATTTGTGTGGGCATCTTGATCTAAGCCCAAAGGTATATTCCAACGACGCATGGTTCAACGTCATTGATGACGTTGATCCGCATTACCTCAAACACTTCAAAGAATTTATGGGGGCCCAAAGAGACTGGCAAAGTAACACAAAATACGGAAAGCCAATTCAAATTAAAGGGGGAATACCCACTATCTTCCTCTGCAATCCTGGACCAACATCATCATATAAAGAATATCTTGACGAAGAAAAAAATGCAGCACTGAAAGCCTGGACTATCAAGAATGCGATCTTCGTCACCATCTACGAGCCGCTCTACTCAGGTTCCAATAAAGGTACGTCACAAAATTGGCAAGGCGAAAGCGGTGCGACGGAAGAGGATTGA
Protein Sequence MPPPKHFRINSKNYFLTFPKCSLTKEEALEQLQKLETPTNKKYIKVCRELHEDGEPHLHVLIQFEGKFNCKNQRFFDLVSPTRSTHFHPNVQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGCQNANDAAAEALNAGSAEAAMAIIREKLPKDFIFQYHNLKSNLDRIFQEPPTPYVSPFLSSSYDQVPQELEEWAAENVVCSAARPIRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNAALKAWTIKNAIFVTIYEPLYSGSNKGTSQNWQGESGATEED

NCBI Accession QKE61404.1
Location 2244-2501
Protein Name C4 protein
Coding Region ATGGGGAGCCTCATCTCCACGTGCTTATCCAATTCGAGGGTAAATTCAACTGCAAGAATCAAAGATTCTTCGACCTGGTATCCCCAACCAGGTCAACACATTTCCATCCGAACGTTCAGGGAGCTAAATCAAGTTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTCGAATGGGGAGAGTTCCAAATCGACGGACGAAGTGCTAGAGGAGGTTGTCAGAATGCTAATGACGCCGCCGCAGAAGCCCTAA
Protein Sequence MGSLISTCLSNSRVNSTARIKDSSTWYPQPGQHISIRTFRELNQVPTSSPTSTRMETHSNGESSKSTDEVLEEVVRMLMTPPQKP