Tomato leaf curl Kunene virus
Basic Information
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCCCTCATTTACAAAAGTAGTGGTGACAGGGACCACCACTAATAATTGTCGACCAATAAGATTTCAGCCTGAAAGCTAATTGGTTTAGTTTTGTCTTTATATACTTGGTGCCTAAGGATATTTTGAACTAAGTGGGAGCCACCCAAGCACGAGCTTGCCGTCGGTGCTTTTATGTGGGATCCATTATTACACGAGCTGCCGGAATCGGTGCACGGATTCCGGTGTATGCTTGCAAACAAATATCTTCAAGCCGTCGAAGAAACTTACGAGCCTAATACGCTAGGTTGGGAGTTAATTAGAGACCTTCTATCTGTCATCCGATCTAAAGATTATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCCTCGAAGGTTCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGTTGCTGTCCCCATTGCCCCAGGCATAAACAAACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGAATGTACAGAATGTACAAAAGCCCTGATGTTCCTCGGGGTTGTGAAGGCCCATGTAAGATACAGTCATTTGATCAGCGTGATTCTGTTGTCCATACGGGTACTGTTAGGTGTCTCAGCGATGTCACTAGGGGTGGTGGTCTTACACATCGCACTGGTAAACGCTTTTGTATTAAGTCTATATATGTATTAGGTAAGGTCTGGATGGACGAGAACGTGAAGAAGTCTAACCATACGAACACATGTATGTTTTGGGTAGTTAGAGATAGGCGCCCTTATGGGCCAAGCCCACAGGATTTTGGTCAGGTGTTTAACATGTTTGATAATGAGCCCAGTACTGCCACGGTTCAGAACGATAAGCGTGATCGCTATCAAGTTCTACGTAGATTTCAGGTAACTGTAACGGGAGGCCCGTCAGGATGTAAGGAGGCTGCCATCGTTAAGAGATTTTTCCGTTTGAATCATCATGTTACTTACAACCATCAAGAGGCCGCAAAATACGAGAATCATACGGAGAATGCTTTATTATTGTATATGGCATGTACACATGCCTCTAACCCTGTATATGCAAGTCTAAAGATACGTATGTATTTCTATGATTCAGTTGGCAATTAATAAAGATCAAATTTTATATCATGATTCTCCCAAACATCTATTGTATTTACAAGTACATTATTTAATACATGATTGACCGCTCTAATTATAAAATTAATTGAAATTACACCAATTTGATCTAAATATTTCATTACTTGTGTTCTAAATACATTTAAGAAACGACCAGTCTGAGGACGTAAGCCCGTCCAGATCTGGAAGTTCAGAAAACATTTGTGAATCCCCAAAGCCCTCCTGAGGTTGTGGTTGAACCGTATTTGTATTGATATGATGTCGTGGTTGCATTGGAATGGCCTCTGGACGTGTCTCGTTATCTTGAAGTACAGGGGATTGGGTACTTCCCAGAAGAAGACGCCATTCCATGCTTGATGAGCAGTGATGTCTTCCCCTGTGCGCAAATCCATTTAAGGCGCAGTTGATGTGTATGAAGAATGAACAGCCACAATCTAGGTCAATCCTCTTCCGTCGCACCGCTTTCGCCTTGCCAATTTTGTGACGTACCTTTATTGGAACCTGAGTAGAGCGGCTCGTAGATGGTGACGAAGATCGCATTCTTGATAGTCCAGGCTTTCAGTGCTGCATTTTTTTCTTCGTCAAGATATTCTTTATATGATGATGTTGGTCCAGGATTGCAGAGGAAGATAGTGGGTATTCCCCCTTTAATTTGAATTGGCTTTCCGTATTTTGTGTTACTTTGCCAGTCTCTTTGGGCCCCCATAAATTCTTTGAAGTGTTTGAGGTAATGCGGATCAACGTCATCAATGACGTTGAACCATGCGTCGTTGGAATATACCTTTGGGCTTAGATCAAGATGCCCACACAAATAATTGTGTGGTCCTAATGACCTAGCCCACATTGTTTTTCCTGTACGACTATCACCCTCAATTACTATACTTATGGGCCTAATAGGCCGCGCAGCGGAACACACAACATTTTCAGCAGCCCATTCTTCAAGTTCCTGAGGGACTTGATCATAGGAAGAAGAAAGAAAAGGAGAAACATAAGGAGTCGGAGGCTCCTGAAAAATTCTATCTAAATTCGATTTTAAATTATGATATTGAAATATAAAATCTTTAGGGAGTTTCTCTCTAATAATAGCCATAGCAGCTTCAGCGGACCCTGCATTTAGGGCTTCTGCGGCGGCGTCATTAGCATTCTGACAACCTCCTCTAGCACTTCGTCCGTCGATTTGGAACTCTCCCCATTCGAGTGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCGGAACTTGATTTAGCTCCCTGAACGTTCGGATGGAAATGTGTTGACCTGGTTGGGGATACCAGGTCGAAGAATCTTTGATTCTTGCAGTTGAATTTACCCTCGAATTGGATAAGCACGTGGAGATGAGGCTCCCCATCTTCGTGAAGCTCTCGACAGACTTTTATATATTTTTTGTTCGTTGGTGTTTCTAGTTTTTGAAGTTGCTCTAGGGCTTCTTCCTTTGTAAGAGAACATTTTGGGAAAGTGAGGAAATAGTTTTTCGAATTTATTCGAAAATGCTTAGGAGGAGGCATTTGGTCAATGGGCACCGATTGACCTTATATTTCATTTACCCCATTATATTGGGGTCCTATATATACTATGCCCCAAATGGCATATATGTAAATTTGAAAAGATATAACTTTAATTTAAATCTTGTAGCGGCCATCCGTCTAATATT
Gene Information
NCBI Accession
|
QKE61400.1
|
Location
|
185-535 |
Protein Name
|
movement protein |
Coding Region
|
ATGTGGGATCCATTATTACACGAGCTGCCGGAATCGGTGCACGGATTCCGGTGTATGCTTGCAAACAAATATCTTCAAGCCGTCGAAGAAACTTACGAGCCTAATACGCTAGGTTGGGAGTTAATTAGAGACCTTCTATCTGTCATCCGATCTAAAGATTATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCCTCGAAGGTTCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGTTGCTGTCCCCATTGCCCCAGGCATAAACAAACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGAATGTACAGAATGTACAAAAGCCCTGA |
Protein Sequence
|
MWDPLLHELPESVHGFRCMLANKYLQAVEETYEPNTLGWELIRDLLSVIRSKDYVEATRRYNHFHARLEGSSKAEFRQPIHQPCCCPHCPRHKQTSIMDVQAHVSKAQNVQNVQKP |
NCBI Accession
|
QKE61399.1
|
Location
|
345-1121 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGACCCGCCGATATAATCATTTCCACGCCCGCCTCGAAGGTTCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGTTGCTGTCCCCATTGCCCCAGGCATAAACAAACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGAATGTACAGAATGTACAAAAGCCCTGATGTTCCTCGGGGTTGTGAAGGCCCATGTAAGATACAGTCATTTGATCAGCGTGATTCTGTTGTCCATACGGGTACTGTTAGGTGTCTCAGCGATGTCACTAGGGGTGGTGGTCTTACACATCGCACTGGTAAACGCTTTTGTATTAAGTCTATATATGTATTAGGTAAGGTCTGGATGGACGAGAACGTGAAGAAGTCTAACCATACGAACACATGTATGTTTTGGGTAGTTAGAGATAGGCGCCCTTATGGGCCAAGCCCACAGGATTTTGGTCAGGTGTTTAACATGTTTGATAATGAGCCCAGTACTGCCACGGTTCAGAACGATAAGCGTGATCGCTATCAAGTTCTACGTAGATTTCAGGTAACTGTAACGGGAGGCCCGTCAGGATGTAAGGAGGCTGCCATCGTTAAGAGATTTTTCCGTTTGAATCATCATGTTACTTACAACCATCAAGAGGCCGCAAAATACGAGAATCATACGGAGAATGCTTTATTATTGTATATGGCATGTACACATGCCTCTAACCCTGTATATGCAAGTCTAAAGATACGTATGTATTTCTATGATTCAGTTGGCAATTAA |
Protein Sequence
|
MSKRPADIIISTPASKVRRRLNFDSPYTNRVAVPIAPGINKRRSWTYRPMYRKPRMYRMYKSPDVPRGCEGPCKIQSFDQRDSVVHTGTVRCLSDVTRGGGLTHRTGKRFCIKSIYVLGKVWMDENVKKSNHTNTCMFWVVRDRRPYGPSPQDFGQVFNMFDNEPSTATVQNDKRDRYQVLRRFQVTVTGGPSGCKEAAIVKRFFRLNHHVTYNHQEAAKYENHTENALLLYMACTHASNPVYASLKIRMYFYDSVGN |
NCBI Accession
|
QKE61403.1
|
Location
|
1118-1522 |
Protein Name
|
replication enhancer protein |
Coding Region
|
ATGGATTTGCGCACAGGGGAAGACATCACTGCTCATCAAGCATGGAATGGCGTCTTCTTCTGGGAAGTACCCAATCCCCTGTACTTCAAGATAACGAGACACGTCCAGAGGCCATTCCAATGCAACCACGACATCATATCAATACAAATACGGTTCAACCACAACCTCAGGAGGGCTTTGGGGATTCACAAATGTTTTCTGAACTTCCAGATCTGGACGGGCTTACGTCCTCAGACTGGTCGTTTCTTAAATGTATTTAGAACACAAGTAATGAAATATTTAGATCAAATTGGTGTAATTTCAATTAATTTTATAATTAGAGCGGTCAATCATGTATTAAATAATGTACTTGTAAATACAATAGATGTTTGGGAGAATCATGATATAAAATTTGATCTTTATTAA |
Protein Sequence
|
MDLRTGEDITAHQAWNGVFFWEVPNPLYFKITRHVQRPFQCNHDIISIQIRFNHNLRRALGIHKCFLNFQIWTGLRPQTGRFLNVFRTQVMKYLDQIGVISINFIIRAVNHVLNNVLVNTIDVWENHDIKFDLY |
NCBI Accession
|
QKE61402.1
|
Location
|
1263-1670 |
Protein Name
|
transcriptional activator protein |
Coding Region
|
ATGCGATCTTCGTCACCATCTACGAGCCGCTCTACTCAGGTTCCAATAAAGGTACGTCACAAAATTGGCAAGGCGAAAGCGGTGCGACGGAAGAGGATTGACCTAGATTGTGGCTGTTCATTCTTCATACACATCAACTGCGCCTTAAATGGATTTGCGCACAGGGGAAGACATCACTGCTCATCAAGCATGGAATGGCGTCTTCTTCTGGGAAGTACCCAATCCCCTGTACTTCAAGATAACGAGACACGTCCAGAGGCCATTCCAATGCAACCACGACATCATATCAATACAAATACGGTTCAACCACAACCTCAGGAGGGCTTTGGGGATTCACAAATGTTTTCTGAACTTCCAGATCTGGACGGGCTTACGTCCTCAGACTGGTCGTTTCTTAAATGTATTTAG |
Protein Sequence
|
MRSSSPSTSRSTQVPIKVRHKIGKAKAVRRKRIDLDCGCSFFIHINCALNGFAHRGRHHCSSSMEWRLLLGSTQSPVLQDNETRPEAIPMQPRHHINTNTVQPQPQEGFGDSQMFSELPDLDGLTSSDWSFLKCI |
NCBI Accession
|
QKE61401.1
|
Location
|
1570-2658 |
Protein Name
|
replication associated protein |
Coding Region
|
ATGCCTCCTCCTAAGCATTTTCGAATAAATTCGAAAAACTATTTCCTCACTTTCCCAAAATGTTCTCTTACAAAGGAAGAAGCCCTAGAGCAACTTCAAAAACTAGAAACACCAACGAACAAAAAATATATAAAAGTCTGTCGAGAGCTTCACGAAGATGGGGAGCCTCATCTCCACGTGCTTATCCAATTCGAGGGTAAATTCAACTGCAAGAATCAAAGATTCTTCGACCTGGTATCCCCAACCAGGTCAACACATTTCCATCCGAACGTTCAGGGAGCTAAATCAAGTTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTCGAATGGGGAGAGTTCCAAATCGACGGACGAAGTGCTAGAGGAGGTTGTCAGAATGCTAATGACGCCGCCGCAGAAGCCCTAAATGCAGGGTCCGCTGAAGCTGCTATGGCTATTATTAGAGAGAAACTCCCTAAAGATTTTATATTTCAATATCATAATTTAAAATCGAATTTAGATAGAATTTTTCAGGAGCCTCCGACTCCTTATGTTTCTCCTTTTCTTTCTTCTTCCTATGATCAAGTCCCTCAGGAACTTGAAGAATGGGCTGCTGAAAATGTTGTGTGTTCCGCTGCGCGGCCTATTAGGCCCATAAGTATAGTAATTGAGGGTGATAGTCGTACAGGAAAAACAATGTGGGCTAGGTCATTAGGACCACACAATTATTTGTGTGGGCATCTTGATCTAAGCCCAAAGGTATATTCCAACGACGCATGGTTCAACGTCATTGATGACGTTGATCCGCATTACCTCAAACACTTCAAAGAATTTATGGGGGCCCAAAGAGACTGGCAAAGTAACACAAAATACGGAAAGCCAATTCAAATTAAAGGGGGAATACCCACTATCTTCCTCTGCAATCCTGGACCAACATCATCATATAAAGAATATCTTGACGAAGAAAAAAATGCAGCACTGAAAGCCTGGACTATCAAGAATGCGATCTTCGTCACCATCTACGAGCCGCTCTACTCAGGTTCCAATAAAGGTACGTCACAAAATTGGCAAGGCGAAAGCGGTGCGACGGAAGAGGATTGA |
Protein Sequence
|
MPPPKHFRINSKNYFLTFPKCSLTKEEALEQLQKLETPTNKKYIKVCRELHEDGEPHLHVLIQFEGKFNCKNQRFFDLVSPTRSTHFHPNVQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGCQNANDAAAEALNAGSAEAAMAIIREKLPKDFIFQYHNLKSNLDRIFQEPPTPYVSPFLSSSYDQVPQELEEWAAENVVCSAARPIRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNAALKAWTIKNAIFVTIYEPLYSGSNKGTSQNWQGESGATEED |
NCBI Accession
|
QKE61404.1
|
Location
|
2244-2501 |
Protein Name
|
C4 protein |
Coding Region
|
ATGGGGAGCCTCATCTCCACGTGCTTATCCAATTCGAGGGTAAATTCAACTGCAAGAATCAAAGATTCTTCGACCTGGTATCCCCAACCAGGTCAACACATTTCCATCCGAACGTTCAGGGAGCTAAATCAAGTTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTCGAATGGGGAGAGTTCCAAATCGACGGACGAAGTGCTAGAGGAGGTTGTCAGAATGCTAATGACGCCGCCGCAGAAGCCCTAA |
Protein Sequence
|
MGSLISTCLSNSRVNSTARIKDSSTWYPQPGQHISIRTFRELNQVPTSSPTSTRMETHSNGESSKSTDEVLEEVVRMLMTPPQKP |