Tomato leaf curl Guangxi virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000868445.1
Isolate China:Guangxi
Release date 2015/2/13
Submitter Xu,Y.P., Cai,X.Z., Zhou,X.P.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_008329
ACCGGATGGCCGCGCAAAGTGTTAAAGTGGTCCCCCCTCCACTAACTGACAAAGACATGTCGGCCAATAAAAACGCTCCCTCAAAGTTAAATTAGTGGTGGTCCCTCTATTTAAACTTCCTTAGCAAGTAGTTCATTCCGCACTATGTGGGATCCATTGCTTAATGAGTTTCCTGAAACCGTTCACGGTTTTAGGTGCATGTTAGCAATTAAGTATTTGCAGTTAGTAGAAAATACATACTCTCCGGATACGTTAGGGTACGATTTAATTCGTGATTTAATTTTAGTTGTTCGTGCTCGAGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGTCGGTTGAATTTCGACAGCCCTTATACCAGCCGTGCTGCTGCCACCACTGTCCTCGTCACAAACAAAAGGAAATCATGGGTCAATCGGCCCATGTATCGAAAGCCCAGGATGTACAGGATGTTCAGAAGCCCTGATGTTCCACGAGCCTGTGAAGGGCCTTGCAAAGTCCAATCTTTCGATGCAAAGAATGATATCGGTCACATGGGTAAGGTCATATGTCTGTCTGGTGTTACTAGGGGAGTGGGTTTGACCCATCGTGTTGGTAAACGTTTCTGTGTTAAGTCACTGTATTTTGTTGGCAAGATTTGGATGGATGAAAACATCAAGGTGAAGAACCACACTAACACCGTTATGTTCTGGATAGTGAGGGATAGACGTCCTAGTGGAACTCCTAATGATTTTCAGCAGGTGTTTAATGTTTACGATAATGAACCTTCTACGGCTACCGTCAAGAACGACCATCGTGATCGTTTCCAGGTGTTGAGGAGGTTCCAGGCAACAGTTACTGGTGGACAGTATGCAGCTAAGGAGCAGGCGATAATTAGGAAGTTTTATCGTGTTAATAATCATGTTGTGTACAATCACCAAGAAGCTGGGAAGTACGAGAATCACACTGAGAATGCTCTTTTGTTGTACATGGCATGTACTCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTAAGGAGTTATTTCTATGACTCCGTTACGAATTAATAAATATTGAATTTTATTATATGAGAATGTGTTACATATTCTGTTTTTTCCAATACATCCCATAATACATGATTACATGCTCTAATTACATTGTTAATACTAATTACACTCAAATTATCTAAATATTTCATACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAACGAGTCCAGATCTGGAAGATCAGAAAACACTGGTGTATTCCCAACGCTTTCCTCAGGTTGTGGTTGAATTGTATTTGGATCGTTATGATGTCGTGGTTGGTGTTGAATGGTCTCTCGTGGTGCTTGGTTATCTTGAAATATAGGGGATTTTTGATCGTCCAGGTATACACGCCACTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGAAAATCCATGATTTGCACAATCTATGCCGAAGTAGTATGAGCACCCGCACGTTAGATCAACTCTCCGTCTCCGAATGGGCTTCCTCTTGGCTATTCTGTGTTGCACTTTGATTGGTACCTGAGTACAATGGGCTGTTGAGGGTGATGAATTCTGCATTCTTTAATGCCCAATCTTTTAATGCTGAATTTTTATCCTCATTCAAGTACTCTTTATATGATGATGTTGGGCCTGGATTGCAAAGGAAGATACTTGGGATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGACGTTATACCAAGCATCATTACTGTATACTTTTGGGCTTAGATCAAGATGTCCACACAAATAATTGTGTGGTCCCAGTGATCTGGCCCACATTGTTTTACCTGTACGACTATCACCTTCTATCACAATACTTTTGGGTCTCCAAGGCCGCGCAGCGGCACCACTCACATTCTCAGAAACCCACTCTTCAAGTTCTTCTGGAACTTGATCGAATGAAGAAGAAAGAAATGGACAAACAAAAACCTCTAAAGGAGGTGCAAAAATCCTATCTAAGTTAGAGTTTAAATTATGAAATTGTAAAACATAATCTTTAGGAGCTAACTCCTTAATTACTCTAAGAGCCTCAGCCTTACTGCCGCTGTTAATTGCCTGGGCGTAAGCATCATTGGCTGATTGTTGACCCCCTCTTGCAGATCGTCCGTCGATCTGAAACTCTCCCCAGTCGAGGGTGTCTCCGTCCTTCTCCAGGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGAGACCAGGTCGAAGAATCTGTTATTTTGGCATTTGTATTTGCCTTCGAATTGGATAAGCACGTGGAGATGAGGGCTCCCATCTTCATGAAGTTCGCTGCAGATTTTGATGTATTTTTTATTTGTTGGGGTGTTTAGGTTTTTTATTTGGGAAAGTGCCTCTTCTTTAGTAAGAGAGCATTGTGGATAAGTGAGGAAAAAGTTTTTGGCATATATTTGAAAACGCTTAGGAGGAGCCATTGACTTGGTCAATCGGTACTCAACAAACTTGGCTATGCAATCGGTGATTGGTACTCAATATATAGTGAGTACCAAATGGCATGATTGTAATTTCTTAAAGAAATTCAAATTGTAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_740293.1
Location 145-495
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCATTGCTTAATGAGTTTCCTGAAACCGTTCACGGTTTTAGGTGCATGTTAGCAATTAAGTATTTGCAGTTAGTAGAAAATACATACTCTCCGGATACGTTAGGGTACGATTTAATTCGTGATTTAATTTTAGTTGTTCGTGCTCGAGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGTCGGTTGAATTTCGACAGCCCTTATACCAGCCGTGCTGCTGCCACCACTGTCCTCGTCACAAACAAAAGGAAATCATGGGTCAATCGGCCCATGTATCGAAAGCCCAGGATGTACAGGATGTTCAGAAGCCCTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVVRARDYVEASRRYSHFHSRIQGASSVEFRQPLYQPCCCHHCPRHKQKEIMGQSAHVSKAQDVQDVQKP

NCBI Accession YP_740294.1
Location 305-1078
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGTCGGTTGAATTTCGACAGCCCTTATACCAGCCGTGCTGCTGCCACCACTGTCCTCGTCACAAACAAAAGGAAATCATGGGTCAATCGGCCCATGTATCGAAAGCCCAGGATGTACAGGATGTTCAGAAGCCCTGATGTTCCACGAGCCTGTGAAGGGCCTTGCAAAGTCCAATCTTTCGATGCAAAGAATGATATCGGTCACATGGGTAAGGTCATATGTCTGTCTGGTGTTACTAGGGGAGTGGGTTTGACCCATCGTGTTGGTAAACGTTTCTGTGTTAAGTCACTGTATTTTGTTGGCAAGATTTGGATGGATGAAAACATCAAGGTGAAGAACCACACTAACACCGTTATGTTCTGGATAGTGAGGGATAGACGTCCTAGTGGAACTCCTAATGATTTTCAGCAGGTGTTTAATGTTTACGATAATGAACCTTCTACGGCTACCGTCAAGAACGACCATCGTGATCGTTTCCAGGTGTTGAGGAGGTTCCAGGCAACAGTTACTGGTGGACAGTATGCAGCTAAGGAGCAGGCGATAATTAGGAAGTTTTATCGTGTTAATAATCATGTTGTGTACAATCACCAAGAAGCTGGGAAGTACGAGAATCACACTGAGAATGCTCTTTTGTTGTACATGGCATGTACTCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTAAGGAGTTATTTCTATGACTCCGTTACGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYTSRAAATTVLVTNKRKSWVNRPMYRKPRMYRMFRSPDVPRACEGPCKVQSFDAKNDIGHMGKVICLSGVTRGVGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEPSTATVKNDHRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession YP_740295.1
Location 1075-1479
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGTTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATATTTAGATAATTTGAGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAAAAAACAGAATATGTAACACATTCTCATATAATAAAATTCAATATTTATTAA
Protein Sequence MDFRTGELLTATQCESGVYTWTIKNPLYFKITKHHERPFNTNHDIITIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLSVISINNVIRACNHVLWDVLEKTEYVTHSHIIKFNIY

NCBI Accession YP_740296.1
Location 1220-1627
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCCATTCGGAGACGGAGAGTTGATCTAACGTGCGGGTGCTCATACTACTTCGGCATAGATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGTTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAG
Protein Sequence MQNSSPSTAHCTQVPIKVQHRIAKRKPIRRRRVDLTCGCSYYFGIDCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQPEESVGNTPVFSDLPDLDSFTTSDLAFLKSI

NCBI Accession YP_740297.1
Location 1527-2615
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGGCTCCTCCTAAGCGTTTTCAAATATATGCCAAAAACTTTTTCCTCACTTATCCACAATGCTCTCTTACTAAAGAAGAGGCACTTTCCCAAATAAAAAACCTAAACACCCCAACAAATAAAAAATACATCAAAATCTGCAGCGAACTTCATGAAGATGGGAGCCCTCATCTCCACGTGCTTATCCAATTCGAAGGCAAATACAAATGCCAAAATAACAGATTCTTCGACCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACCTGGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGTCAACAATCAGCCAATGATGCTTACGCCCAGGCAATTAACAGCGGCAGTAAGGCTGAGGCTCTTAGAGTAATTAAGGAGTTAGCTCCTAAAGATTATGTTTTACAATTTCATAATTTAAACTCTAACTTAGATAGGATTTTTGCACCTCCTTTAGAGGTTTTTGTTTGTCCATTTCTTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTTTCTGAGAATGTGAGTGGTGCCGCTGCGCGGCCTTGGAGACCCAAAAGTATTGTGATAGAAGGTGATAGTCGTACAGGTAAAACAATGTGGGCCAGATCACTGGGACCACACAATTATTTGTGTGGACATCTTGATCTAAGCCCAAAAGTATACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAGTACGGGAAGCCAGTTCAAATTAAAGGTGGAATCCCAAGTATCTTCCTTTGCAATCCAGGCCCAACATCATCATATAAAGAGTACTTGAATGAGGATAAAAATTCAGCATTAAAAGATTGGGCATTAAAGAATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCCATTCGGAGACGGAGAGTTGA
Protein Sequence MAPPKRFQIYAKNFFLTYPQCSLTKEEALSQIKNLNTPTNKKYIKICSELHEDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLEKDGDTLDWGEFQIDGRSARGGQQSANDAYAQAINSGSKAEALRVIKELAPKDYVLQFHNLNSNLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPSIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPLYSGTNQSATQNSQEEAHSETES

NCBI Accession YP_740298.1
Location 2168-2464
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGAAGATGGGAGCCCTCATCTCCACGTGCTTATCCAATTCGAAGGCAAATACAAATGCCAAAATAACAGATTCTTCGACCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACCTGGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGTCAACAATCAGCCAATGATGCTTACGCCCAGGCAATTAACAGCGGCAGTAAGGCTGAGGCTCTTAGAGTAA
Protein Sequence MKMGALISTCLSNSKANTNAKITDSSTWSPQPGQHISIRTFRELNPAPTSSPTWRRTETPSTGESFRSTDDLQEGVNNQPMMLTPRQLTAAVRLRLLE