Tomato leaf curl Guangxi virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000868445.1 |
Isolate |
China:Guangxi |
Release date |
2015/2/13 |
Submitter |
Xu,Y.P., Cai,X.Z., Zhou,X.P. |
Host |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCAAAGTGTTAAAGTGGTCCCCCCTCCACTAACTGACAAAGACATGTCGGCCAATAAAAACGCTCCCTCAAAGTTAAATTAGTGGTGGTCCCTCTATTTAAACTTCCTTAGCAAGTAGTTCATTCCGCACTATGTGGGATCCATTGCTTAATGAGTTTCCTGAAACCGTTCACGGTTTTAGGTGCATGTTAGCAATTAAGTATTTGCAGTTAGTAGAAAATACATACTCTCCGGATACGTTAGGGTACGATTTAATTCGTGATTTAATTTTAGTTGTTCGTGCTCGAGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGTCGGTTGAATTTCGACAGCCCTTATACCAGCCGTGCTGCTGCCACCACTGTCCTCGTCACAAACAAAAGGAAATCATGGGTCAATCGGCCCATGTATCGAAAGCCCAGGATGTACAGGATGTTCAGAAGCCCTGATGTTCCACGAGCCTGTGAAGGGCCTTGCAAAGTCCAATCTTTCGATGCAAAGAATGATATCGGTCACATGGGTAAGGTCATATGTCTGTCTGGTGTTACTAGGGGAGTGGGTTTGACCCATCGTGTTGGTAAACGTTTCTGTGTTAAGTCACTGTATTTTGTTGGCAAGATTTGGATGGATGAAAACATCAAGGTGAAGAACCACACTAACACCGTTATGTTCTGGATAGTGAGGGATAGACGTCCTAGTGGAACTCCTAATGATTTTCAGCAGGTGTTTAATGTTTACGATAATGAACCTTCTACGGCTACCGTCAAGAACGACCATCGTGATCGTTTCCAGGTGTTGAGGAGGTTCCAGGCAACAGTTACTGGTGGACAGTATGCAGCTAAGGAGCAGGCGATAATTAGGAAGTTTTATCGTGTTAATAATCATGTTGTGTACAATCACCAAGAAGCTGGGAAGTACGAGAATCACACTGAGAATGCTCTTTTGTTGTACATGGCATGTACTCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTAAGGAGTTATTTCTATGACTCCGTTACGAATTAATAAATATTGAATTTTATTATATGAGAATGTGTTACATATTCTGTTTTTTCCAATACATCCCATAATACATGATTACATGCTCTAATTACATTGTTAATACTAATTACACTCAAATTATCTAAATATTTCATACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAACGAGTCCAGATCTGGAAGATCAGAAAACACTGGTGTATTCCCAACGCTTTCCTCAGGTTGTGGTTGAATTGTATTTGGATCGTTATGATGTCGTGGTTGGTGTTGAATGGTCTCTCGTGGTGCTTGGTTATCTTGAAATATAGGGGATTTTTGATCGTCCAGGTATACACGCCACTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGAAAATCCATGATTTGCACAATCTATGCCGAAGTAGTATGAGCACCCGCACGTTAGATCAACTCTCCGTCTCCGAATGGGCTTCCTCTTGGCTATTCTGTGTTGCACTTTGATTGGTACCTGAGTACAATGGGCTGTTGAGGGTGATGAATTCTGCATTCTTTAATGCCCAATCTTTTAATGCTGAATTTTTATCCTCATTCAAGTACTCTTTATATGATGATGTTGGGCCTGGATTGCAAAGGAAGATACTTGGGATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGACGTTATACCAAGCATCATTACTGTATACTTTTGGGCTTAGATCAAGATGTCCACACAAATAATTGTGTGGTCCCAGTGATCTGGCCCACATTGTTTTACCTGTACGACTATCACCTTCTATCACAATACTTTTGGGTCTCCAAGGCCGCGCAGCGGCACCACTCACATTCTCAGAAACCCACTCTTCAAGTTCTTCTGGAACTTGATCGAATGAAGAAGAAAGAAATGGACAAACAAAAACCTCTAAAGGAGGTGCAAAAATCCTATCTAAGTTAGAGTTTAAATTATGAAATTGTAAAACATAATCTTTAGGAGCTAACTCCTTAATTACTCTAAGAGCCTCAGCCTTACTGCCGCTGTTAATTGCCTGGGCGTAAGCATCATTGGCTGATTGTTGACCCCCTCTTGCAGATCGTCCGTCGATCTGAAACTCTCCCCAGTCGAGGGTGTCTCCGTCCTTCTCCAGGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGAGACCAGGTCGAAGAATCTGTTATTTTGGCATTTGTATTTGCCTTCGAATTGGATAAGCACGTGGAGATGAGGGCTCCCATCTTCATGAAGTTCGCTGCAGATTTTGATGTATTTTTTATTTGTTGGGGTGTTTAGGTTTTTTATTTGGGAAAGTGCCTCTTCTTTAGTAAGAGAGCATTGTGGATAAGTGAGGAAAAAGTTTTTGGCATATATTTGAAAACGCTTAGGAGGAGCCATTGACTTGGTCAATCGGTACTCAACAAACTTGGCTATGCAATCGGTGATTGGTACTCAATATATAGTGAGTACCAAATGGCATGATTGTAATTTCTTAAAGAAATTCAAATTGTAAAAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
YP_740293.1
|
Location
|
145-495 |
Gene Name
|
AV2 |
Protein Name
|
AV2 protein |
Coding Region
|
ATGTGGGATCCATTGCTTAATGAGTTTCCTGAAACCGTTCACGGTTTTAGGTGCATGTTAGCAATTAAGTATTTGCAGTTAGTAGAAAATACATACTCTCCGGATACGTTAGGGTACGATTTAATTCGTGATTTAATTTTAGTTGTTCGTGCTCGAGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGTCGGTTGAATTTCGACAGCCCTTATACCAGCCGTGCTGCTGCCACCACTGTCCTCGTCACAAACAAAAGGAAATCATGGGTCAATCGGCCCATGTATCGAAAGCCCAGGATGTACAGGATGTTCAGAAGCCCTGA |
Protein Sequence
|
MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVVRARDYVEASRRYSHFHSRIQGASSVEFRQPLYQPCCCHHCPRHKQKEIMGQSAHVSKAQDVQDVQKP |
NCBI Accession
|
YP_740294.1
|
Location
|
305-1078 |
Gene Name
|
AV1 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGTCGGTTGAATTTCGACAGCCCTTATACCAGCCGTGCTGCTGCCACCACTGTCCTCGTCACAAACAAAAGGAAATCATGGGTCAATCGGCCCATGTATCGAAAGCCCAGGATGTACAGGATGTTCAGAAGCCCTGATGTTCCACGAGCCTGTGAAGGGCCTTGCAAAGTCCAATCTTTCGATGCAAAGAATGATATCGGTCACATGGGTAAGGTCATATGTCTGTCTGGTGTTACTAGGGGAGTGGGTTTGACCCATCGTGTTGGTAAACGTTTCTGTGTTAAGTCACTGTATTTTGTTGGCAAGATTTGGATGGATGAAAACATCAAGGTGAAGAACCACACTAACACCGTTATGTTCTGGATAGTGAGGGATAGACGTCCTAGTGGAACTCCTAATGATTTTCAGCAGGTGTTTAATGTTTACGATAATGAACCTTCTACGGCTACCGTCAAGAACGACCATCGTGATCGTTTCCAGGTGTTGAGGAGGTTCCAGGCAACAGTTACTGGTGGACAGTATGCAGCTAAGGAGCAGGCGATAATTAGGAAGTTTTATCGTGTTAATAATCATGTTGTGTACAATCACCAAGAAGCTGGGAAGTACGAGAATCACACTGAGAATGCTCTTTTGTTGTACATGGCATGTACTCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTAAGGAGTTATTTCTATGACTCCGTTACGAATTAA |
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDSPYTSRAAATTVLVTNKRKSWVNRPMYRKPRMYRMFRSPDVPRACEGPCKVQSFDAKNDIGHMGKVICLSGVTRGVGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEPSTATVKNDHRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN |
NCBI Accession
|
YP_740295.1
|
Location
|
1075-1479 |
Gene Name
|
AC3 |
Protein Name
|
AC3 protein |
Coding Region
|
ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGTTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATATTTAGATAATTTGAGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAAAAAACAGAATATGTAACACATTCTCATATAATAAAATTCAATATTTATTAA |
Protein Sequence
|
MDFRTGELLTATQCESGVYTWTIKNPLYFKITKHHERPFNTNHDIITIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLSVISINNVIRACNHVLWDVLEKTEYVTHSHIIKFNIY |
NCBI Accession
|
YP_740296.1
|
Location
|
1220-1627 |
Gene Name
|
AC2 |
Protein Name
|
AC2 protein |
Coding Region
|
ATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCCATTCGGAGACGGAGAGTTGATCTAACGTGCGGGTGCTCATACTACTTCGGCATAGATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGTTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAG |
Protein Sequence
|
MQNSSPSTAHCTQVPIKVQHRIAKRKPIRRRRVDLTCGCSYYFGIDCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQPEESVGNTPVFSDLPDLDSFTTSDLAFLKSI |
NCBI Accession
|
YP_740297.1
|
Location
|
1527-2615 |
Gene Name
|
AC1 |
Protein Name
|
AC1 protein |
Coding Region
|
ATGGCTCCTCCTAAGCGTTTTCAAATATATGCCAAAAACTTTTTCCTCACTTATCCACAATGCTCTCTTACTAAAGAAGAGGCACTTTCCCAAATAAAAAACCTAAACACCCCAACAAATAAAAAATACATCAAAATCTGCAGCGAACTTCATGAAGATGGGAGCCCTCATCTCCACGTGCTTATCCAATTCGAAGGCAAATACAAATGCCAAAATAACAGATTCTTCGACCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACCTGGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGTCAACAATCAGCCAATGATGCTTACGCCCAGGCAATTAACAGCGGCAGTAAGGCTGAGGCTCTTAGAGTAATTAAGGAGTTAGCTCCTAAAGATTATGTTTTACAATTTCATAATTTAAACTCTAACTTAGATAGGATTTTTGCACCTCCTTTAGAGGTTTTTGTTTGTCCATTTCTTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTTTCTGAGAATGTGAGTGGTGCCGCTGCGCGGCCTTGGAGACCCAAAAGTATTGTGATAGAAGGTGATAGTCGTACAGGTAAAACAATGTGGGCCAGATCACTGGGACCACACAATTATTTGTGTGGACATCTTGATCTAAGCCCAAAAGTATACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAGTACGGGAAGCCAGTTCAAATTAAAGGTGGAATCCCAAGTATCTTCCTTTGCAATCCAGGCCCAACATCATCATATAAAGAGTACTTGAATGAGGATAAAAATTCAGCATTAAAAGATTGGGCATTAAAGAATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCCATTCGGAGACGGAGAGTTGA |
Protein Sequence
|
MAPPKRFQIYAKNFFLTYPQCSLTKEEALSQIKNLNTPTNKKYIKICSELHEDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLEKDGDTLDWGEFQIDGRSARGGQQSANDAYAQAINSGSKAEALRVIKELAPKDYVLQFHNLNSNLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPSIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPLYSGTNQSATQNSQEEAHSETES |
NCBI Accession
|
YP_740298.1
|
Location
|
2168-2464 |
Gene Name
|
AC4 |
Protein Name
|
AC4 protein |
Coding Region
|
ATGAAGATGGGAGCCCTCATCTCCACGTGCTTATCCAATTCGAAGGCAAATACAAATGCCAAAATAACAGATTCTTCGACCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACCTGGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGTCAACAATCAGCCAATGATGCTTACGCCCAGGCAATTAACAGCGGCAGTAAGGCTGAGGCTCTTAGAGTAA |
Protein Sequence
|
MKMGALISTCLSNSKANTNAKITDSSTWSPQPGQHISIRTFRELNPAPTSSPTWRRTETPSTGESFRSTDDLQEGVNNQPMMLTPRQLTAAVRLRLLE |