Tomato leaf curl Guangdong virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000869445.1
Isolate China: Guangdong, Guangzhou
Release date 2015/2/13
Submitter He,Z.F., Yu,H.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_008373
ACCGGATGGCCGCGATTTTTTTTATGGTGGTCCCCCCCACTAAGTTTTGTCGGCCAATGAGAACGCTCTCTCAAATGTTAGTTAAATAGTTGTCCCTTATAAAACTTGGTCCCTAAGTACTCATTGTAAAGATGTGGGATCCTCTTTTAAACGAGTTTCCTGAAACCGTACATGGTTTTAGGTGTATGCTAGCGATTAAGTATTTACAGTTAGTAGAGAATACATACTCTCCGGATACGTTGGGGTACGATCTAATACGTGATTTAATATTGGTTATTCGTGCTAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGTTGAATTTCGACAGCCCATATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAAGATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGGGGTTGTGAAGGCCCATGTAAAGTCCAATCGTATGAACAGCGTCATGATGTAGTCCATGTAGGTAAGGTCATTTGTGTGTCTGATGTTACTCGTGGTAATGGGTTGACTCATCGTGTTGGGAAGAGGTTTTGTGTCAAGTCTGTGTATGTGTTAGGTAAAATATGGATGGATGAGAATATTAAGACTAAAAATCACACAAACACTGTGATGTTTTTTTTAGTTCGTGATAGAAGACCCTTCGGCACTCCCCAAGATTTCGGGCAGGTGTTTAACATGTATGATAACGAGCCAAGTACAGCAACTGTTAAGAACGATAACAGAGATCGTTTTCAAGTTCTTCGTCGATTTCAGGCGACTGTCACCGGTGGTCAGTATGCAAGTAAGGAGCAAGCAATAGTTAGGAAGTTTATGAAGGTCAATAATCATGTAACGTATAATCATCAAGAGGCTGCGAAGTATGATAACCATACTGAGAATGCTCTGTTATTGTATATGGCATGTACGCATGCTAGTAATCCAGTGTATGCTACCTTGAAAATCAGGATCTATTTCTATGATTCTGTACAAAATTAATAAAGATTGAATTTTATTATACTTGAGAATGTTGTTTCAATTGTCCCTTCTAATACATCATACAGTACATGTGAAATTGCTCTAATTACATTGTTGATACTAATCACTCCTAAATTCGCTAAATATTTCATACATTGATATTTAAATACTCTTAAGAAATGCGAGGTCTGAGGATGTAAAAGAGTCCAGATCCGGCAGGTTAGAAAACATTGGTGTATCCCCAGCGCTTTCCTCAGGTTGTAATTGAATTGGATTTGGACGGTTATGATGTCGTGGTTCCTCCGGAATGGTCTCTCTAGGTGTTGGGGTATCTTGAAATATAGGGGATTGTTGATTGTCCAGGTATATACGCCATTCTCTGCTTGAGCCGCAGTGATGAGTTCCCCTGTGCGTAAATCCATGTGATGCGCAATCAAGTCCAAAATAGTAAGAGCATCCACAAGGTAGATCAACTCTACGTCTGCGAACTGGTCTCCTCTTCGCTATTTTGTGTTGGACTTTGATTGGTACTTGAGTACAATGGCCCTGTGAGGGTGACGAATGTTGCATTTTTTAATGCCCAGTTTCTGAGTGCAGAATTCTTATCCTCGTCCAAGTACTCTTTATATGATGAAGTTGGTCCTGGATTGCATAGGAAGATTGTTGGGATACCTCCTTTAATTTGAATTGGTTTCCCGTACTTCGTGTTGCTTTGCCAGTCTCGTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGATCTACGTCATCAATGACGTTGTACCAGGCATCATTAGAATACACCTTGGGACTCAAGTCCAGGTGACCACATAAATAGTTATGTGGACCCAAAGAACGAGCCCACATTGTCTTGCCGGTTCTACTCTCGCCCTCGATTACAATACTATTGGGCCTAAAAGGCCGCGCAGCGGCACCCATTACATTTTCTGCAGCCCATTCTTCGAGTTCTTCCGGAACGAGATCAAAAGAAGAAGAAAGAAAAGGAGATACAAAAATCTCTAAAGGAGGTGCAAAAATCCTATCTAAATTACTATTTAAATTATGAAATTGAAAAATATAATCTTTTGGGAGTTTCTCCCTTATTATCGCTAAGGCAGCGTCTTTGGAACCTGCATTTAAAGCCTCTGCACATGCGTCGTTAGCATTCTGGCAGCCTCCCCTAGCACTTCGTCCGTCGACCTGGAATTGACCCCATTCAATGATGTCTCCATCCTTATGGATGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGTTGATCTGGTTGGGGAAACCAGGTCGAAGAATCTGTTATTCGTGCAGTTGTATTTGCCTTCGAATTGCATAAGCACGTGGAGATGAGGGTTCCCATTCTTGTGTAATTCTCTGCAAATTTTTATGAATTTTATATTGGTAGGGGTTTGCAGGTTTTGTAACTGGGAAAGTGCTTCCTCTTTGGTGAGAGAGCACTGTGGGTATGTTAAGAAATAATTTTTGGCTTTAATAGAAAAACGTCCCGCACGAGGCATTTTGGAATTGGGGGGCACTCAAAGTCTGAGCAATCGGGGGAACTGGGGGGCAATTTATATGGTGCCCCCCAAATGGCATAATCGTAAATATGCATAAGAAATCCAAAATTCAAATTGGTAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_764443.1
Location 132-482
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCTCTTTTAAACGAGTTTCCTGAAACCGTACATGGTTTTAGGTGTATGCTAGCGATTAAGTATTTACAGTTAGTAGAGAATACATACTCTCCGGATACGTTGGGGTACGATCTAATACGTGATTTAATATTGGTTATTCGTGCTAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGTTGAATTTCGACAGCCCATATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAAGATGTACAGGATGTACAAAAGCCCTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHSRIQGASPVEFRQPICQPCCCPHCPRHKQKEVMGESAHVPKAQDVQDVQKP

NCBI Accession YP_764444.1
Location 292-1065
Gene Name AV1
Protein Name capsid protein
Coding Region ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGTTGAATTTCGACAGCCCATATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAAGATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGGGGTTGTGAAGGCCCATGTAAAGTCCAATCGTATGAACAGCGTCATGATGTAGTCCATGTAGGTAAGGTCATTTGTGTGTCTGATGTTACTCGTGGTAATGGGTTGACTCATCGTGTTGGGAAGAGGTTTTGTGTCAAGTCTGTGTATGTGTTAGGTAAAATATGGATGGATGAGAATATTAAGACTAAAAATCACACAAACACTGTGATGTTTTTTTTAGTTCGTGATAGAAGACCCTTCGGCACTCCCCAAGATTTCGGGCAGGTGTTTAACATGTATGATAACGAGCCAAGTACAGCAACTGTTAAGAACGATAACAGAGATCGTTTTCAAGTTCTTCGTCGATTTCAGGCGACTGTCACCGGTGGTCAGTATGCAAGTAAGGAGCAAGCAATAGTTAGGAAGTTTATGAAGGTCAATAATCATGTAACGTATAATCATCAAGAGGCTGCGAAGTATGATAACCATACTGAGAATGCTCTGTTATTGTATATGGCATGTACGCATGCTAGTAATCCAGTGTATGCTACCTTGAAAATCAGGATCTATTTCTATGATTCTGTACAAAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSWVNRPMYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDVVHVGKVICVSDVTRGNGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN

NCBI Accession YP_764445.1
Location 1062-1466
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTTACGCACAGGGGAACTCATCACTGCGGCTCAAGCAGAGAATGGCGTATATACCTGGACAATCAACAATCCCCTATATTTCAAGATACCCCAACACCTAGAGAGACCATTCCGGAGGAACCACGACATCATAACCGTCCAAATCCAATTCAATTACAACCTGAGGAAAGCGCTGGGGATACACCAATGTTTTCTAACCTGCCGGATCTGGACTCTTTTACATCCTCAGACCTCGCATTTCTTAAGAGTATTTAAATATCAATGTATGAAATATTTAGCGAATTTAGGAGTGATTAGTATCAACAATGTAATTAGAGCAATTTCACATGTACTGTATGATGTATTAGAAGGGACAATTGAAACAACATTCTCAAGTATAATAAAATTCAATCTTTATTAA
Protein Sequence MDLRTGELITAAQAENGVYTWTINNPLYFKIPQHLERPFRRNHDIITVQIQFNYNLRKALGIHQCFLTCRIWTLLHPQTSHFLRVFKYQCMKYLANLGVISINNVIRAISHVLYDVLEGTIETTFSSIIKFNLY

NCBI Accession YP_764446.1
Location 1207-1614
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCAACATTCGTCACCCTCACAGGGCCATTGTACTCAAGTACCAATCAAAGTCCAACACAAAATAGCGAAGAGGAGACCAGTTCGCAGACGTAGAGTTGATCTACCTTGTGGATGCTCTTACTATTTTGGACTTGATTGCGCATCACATGGATTTACGCACAGGGGAACTCATCACTGCGGCTCAAGCAGAGAATGGCGTATATACCTGGACAATCAACAATCCCCTATATTTCAAGATACCCCAACACCTAGAGAGACCATTCCGGAGGAACCACGACATCATAACCGTCCAAATCCAATTCAATTACAACCTGAGGAAAGCGCTGGGGATACACCAATGTTTTCTAACCTGCCGGATCTGGACTCTTTTACATCCTCAGACCTCGCATTTCTTAAGAGTATTTAA
Protein Sequence MQHSSPSQGHCTQVPIKVQHKIAKRRPVRRRRVDLPCGCSYYFGLDCASHGFTHRGTHHCGSSREWRIYLDNQQSPIFQDTPTPRETIPEEPRHHNRPNPIQLQPEESAGDTPMFSNLPDLDSFTSSDLAFLKSI

NCBI Accession YP_764447.1
Location 1520-2602
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGCCTCGTGCGGGACGTTTTTCTATTAAAGCCAAAAATTATTTCTTAACATACCCACAGTGCTCTCTCACCAAAGAGGAAGCACTTTCCCAGTTACAAAACCTGCAAACCCCTACCAATATAAAATTCATAAAAATTTGCAGAGAATTACACAAGAATGGGAACCCTCATCTCCACGTGCTTATGCAATTCGAAGGCAAATACAACTGCACGAATAACAGATTCTTCGACCTGGTTTCCCCAACCAGATCAACACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCCATAAGGATGGAGACATCATTGAATGGGGTCAATTCCAGGTCGACGGACGAAGTGCTAGGGGAGGCTGCCAGAATGCTAACGACGCATGTGCAGAGGCTTTAAATGCAGGTTCCAAAGACGCTGCCTTAGCGATAATAAGGGAGAAACTCCCAAAAGATTATATTTTTCAATTTCATAATTTAAATAGTAATTTAGATAGGATTTTTGCACCTCCTTTAGAGATTTTTGTATCTCCTTTTCTTTCTTCTTCTTTTGATCTCGTTCCGGAAGAACTCGAAGAATGGGCTGCAGAAAATGTAATGGGTGCCGCTGCGCGGCCTTTTAGGCCCAATAGTATTGTAATCGAGGGCGAGAGTAGAACCGGCAAGACAATGTGGGCTCGTTCTTTGGGTCCACATAACTATTTATGTGGTCACCTGGACTTGAGTCCCAAGGTGTATTCTAATGATGCCTGGTACAACGTCATTGATGACGTAGATCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAACGAGACTGGCAAAGCAACACGAAGTACGGGAAACCAATTCAAATTAAAGGAGGTATCCCAACAATCTTCCTATGCAATCCAGGACCAACTTCATCATATAAAGAGTACTTGGACGAGGATAAGAATTCTGCACTCAGAAACTGGGCATTAAAAAATGCAACATTCGTCACCCTCACAGGGCCATTGTACTCAAGTACCAATCAAAGTCCAACACAAAATAGCGAAGAGGAGACCAGTTCGCAGACGTAG
Protein Sequence MPRAGRFSIKAKNYFLTYPQCSLTKEEALSQLQNLQTPTNIKFIKICRELHKNGNPHLHVLMQFEGKYNCTNNRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYIHKDGDIIEWGQFQVDGRSARGGCQNANDACAEALNAGSKDAALAIIREKLPKDYIFQFHNLNSNLDRIFAPPLEIFVSPFLSSSFDLVPEELEEWAAENVMGAAARPFRPNSIVIEGESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSALRNWALKNATFVTLTGPLYSSTNQSPTQNSEEETSSQT

NCBI Accession YP_764448.1
Location 2188-2445
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAACCCTCATCTCCACGTGCTTATGCAATTCGAAGGCAAATACAACTGCACGAATAACAGATTCTTCGACCTGGTTTCCCCAACCAGATCAACACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCCATAAGGATGGAGACATCATTGAATGGGGTCAATTCCAGGTCGACGGACGAAGTGCTAGGGGAGGCTGCCAGAATGCTAACGACGCATGTGCAGAGGCTTTAA
Protein Sequence MGTLISTCLCNSKANTTARITDSSTWFPQPDQHISIRTFRELNPAPMSSPTSIRMETSLNGVNSRSTDEVLGEAARMLTTHVQRL