Tomato leaf curl Burkina Faso virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002005645.1
Isolate Burkina Faso
Release date 2017/2/23
Submitter Ouattara,A., Tiendrebeogo,F., Lefeuvre,P., Claverie,S., Hoareau,M., Traore,E.V., Barro,N., Traore,O., Lett,J.M., Lett,J.-M.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_033779
ACCGGATGGCCGCGCCCCCCAAAAAAGAAACTGGCCCCACGCACTAATTTTTGTCGACCAATCATATCTCTTCCTGGAAGGTTAGATATTTGTTTTTGTCTCTATATACTTCCTCCGCAAGTTTGGGCCCTGTCCAACATGTGGGATCCACTTTTGAATGAGTTCCCCGATTCTGTTCACGGATTTCGTTGTATGCTAGCTATCAAATATTTGCAGGCCGTCGAGGAAACGTACGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTGATCTCTGTCGTTAGGGCTCGAGATTATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGTTGTCCCCATTGCCCCAGGCACAAACAGGCGTCGATCATGGACTTACCGCCCCATGTATCGAAAGCCTCGGATGTACAGAATGTTCAGAAGTCCTGATGTTCCTCGTGGTTGCGAGGGCCCTTGTAAGGTTCAGTCGTATGAGCAGAGGGATGATGTTAAGCACACTGGTATCGTTCGTTGCGTTAGTGATGTCACACGTGGTTCTGGTATTACTCATCGTGTCGGAAAAAGATTTTGTATTAAATCGATATATGTTCTTGGAAAGGTCTGGATGGATGAAAATATTAAGAAGCAGAATCATACTAATCAGGTTATGTTCTTTTTAGTTCGTGATAGACGTCCCTATGGGAATAGCCCGATGGATTTTGGTCAGGTTTTTAATATGTTCGATAATGAGCCCAGTACTGCTACTGTGAAGAATGATTTGCGTGACAGATATCAAGTCTTGAGGAAATTTCATGCTACTGTGATAGGTGGACCCTCGGGCATGAAAGAGCAGGCTTTAGTTAAGAGATTTTTTAGGGTTAACACTCATGTTGTTTACAATCACCAGGAAGCAGCAAAATACGAGAATCATACGGAGAACGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAATCCTGTGTATGCAACATTGAAGATACGCATCTATTTTTATGATGCTGTTACTAATTAATAAATATTGAATTTTATTTCATGATTTTCCGTAACGGAAATTGTGTTTACAAGTACGTTATATAATACATGATCAACTGCTCTAATTACATTATTAATTGAAATTACTTCTAAATGCTTCAGATGCTTGAGAACTTGGAATTTAAAGACCCTTAAGAAAAGACCAGTCTGAGGCCGTAAGGTCGTCCAGACTTTGAAGTTGAGAAAACATTTGTGAATCCCCAGTGCCCTCCTGAGGTTGTGATTGAACCGTATCTGTAATGTGATGATGTCCTGGTTCATGTTGAATGGCCTGATGTCGTGTCTTGTTATCGTGAAATATAGGGGATTGTTTATCTCCGAGATAAACACGCCATTCTTTGCTTGATGAGCAGTGATGGGTTCCCCTGTGCGTGAATCCATGGTTGATGCAGTCGATGTGGAGGTAGTATGAACAGCCGCAGTCTAGGTCTACTCGTTTACGTCTCACTGCTTTCTTCTTGGCCGCTCTGTGTTGTACTTTGATTGGTACCTGTGAACAATGGGTTGTCGATGGTGACGAAGATCGCATTTTTAATAGCCCAGGCTCTTAGTGCTGCGTTTTTTTCCTCGTCGAGATATTCTTTATATGAGGATGTTGGCCCTGGATTGCATAGAAAGATTGTGGGAATCCCGCCTTTAATTTGGATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAGTCTCGTTGGGCACCCATAAATTCCTTGAAGTGCTTTAGATAGTGCGGGTCTACGTCATCAATGACGTTGTACCACGCATCGTTGCTGTAGACCTTTGGGCTTAGGTCAAGGTGTCCACATAAGTAGTTATGTGGGCCTAGAGAACGGGCCCATATGGTCTTCCCGGTCCGGCTTTCTCCCTCAATGACAATACTGTTGGGCCTCCAGGGCCGCGCAGCGGAAGGCATGACGTTCTCAGAAACCCATGTCTCAAGTTCCTCCGGAACTTGATCGAAAGAAGAAGAAGAAAAAGGAGAAATATAAGGAGCCGGAGGCTCTTCAAAAATCCTATCTAAATTATTATTTAAATTATGAAATTGTAAAATAAAATCTTTAGGGGCTAATTCCCTTATTACATTAAGAGCCGCCGGCTTACTTCCTGCGTTAAGTGCTTTTGCGTAAGCGTCGTTGGCTGATTGCTGCCCGCCCCTTGCAGATCGTCCGTCGATCTGGAATTCTCCCCATTCGAGTGTATCGCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACGAGGTCGAAGAATCTCTGATTTTGGCAGTTGAATTTTCCTTCGAACTGCAGAAGCACATGTAAATGAGGTTCGCCATCTTCGTGCAACTCTCTGCAGATTTTAATGTATTTTTTATTTGTTGGGGTTTGGAGTTTAAGTAGTTGTTCGAGGGCTTCGTCTTTGGTTAGAGAACATTTTGGGAAAGTAAGGAAATAATTTTTGGAATTAACTCTAAAACGCTTTGGAGGAGCCATTTGGTCAACTAGCACCGATTGACTGCCTCAGCTCTCTATCCCGAGCAATTGGGGTTTGGGGTCTTATTTATAGTGTAGCCCCAAATGGCATTTTGGGAATTTAGTAAAGTTCCTTCCTCGTTAATTCGAAATTCAAATTTCGAATTCCCCTAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009345713.1
Location 139-489
Protein Name movement protein
Coding Region ATGTGGGATCCACTTTTGAATGAGTTCCCCGATTCTGTTCACGGATTTCGTTGTATGCTAGCTATCAAATATTTGCAGGCCGTCGAGGAAACGTACGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTGATCTCTGTCGTTAGGGCTCGAGATTATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGTTGTCCCCATTGCCCCAGGCACAAACAGGCGTCGATCATGGACTTACCGCCCCATGTATCGAAAGCCTCGGATGTACAGAATGTTCAGAAGTCCTGA
Protein Sequence MWDPLLNEFPDSVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDLISVVRARDYVEATRRYNHFHARLEGSSKAELRQPIQQPCCCPHCPRHKQASIMDLPPHVSKASDVQNVQKS

NCBI Accession YP_009345714.1
Location 299-1075
Protein Name coat protein
Coding Region ATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGTTGTCCCCATTGCCCCAGGCACAAACAGGCGTCGATCATGGACTTACCGCCCCATGTATCGAAAGCCTCGGATGTACAGAATGTTCAGAAGTCCTGATGTTCCTCGTGGTTGCGAGGGCCCTTGTAAGGTTCAGTCGTATGAGCAGAGGGATGATGTTAAGCACACTGGTATCGTTCGTTGCGTTAGTGATGTCACACGTGGTTCTGGTATTACTCATCGTGTCGGAAAAAGATTTTGTATTAAATCGATATATGTTCTTGGAAAGGTCTGGATGGATGAAAATATTAAGAAGCAGAATCATACTAATCAGGTTATGTTCTTTTTAGTTCGTGATAGACGTCCCTATGGGAATAGCCCGATGGATTTTGGTCAGGTTTTTAATATGTTCGATAATGAGCCCAGTACTGCTACTGTGAAGAATGATTTGCGTGACAGATATCAAGTCTTGAGGAAATTTCATGCTACTGTGATAGGTGGACCCTCGGGCATGAAAGAGCAGGCTTTAGTTAAGAGATTTTTTAGGGTTAACACTCATGTTGTTTACAATCACCAGGAAGCAGCAAAATACGAGAATCATACGGAGAACGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAATCCTGTGTATGCAACATTGAAGATACGCATCTATTTTTATGATGCTGTTACTAATTAA
Protein Sequence MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAVVPIAPGTNRRRSWTYRPMYRKPRMYRMFRSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGSGITHRVGKRFCIKSIYVLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDNEPSTATVKNDLRDRYQVLRKFHATVIGGPSGMKEQALVKRFFRVNTHVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDAVTN

NCBI Accession YP_009345715.1
Location 1072-1476
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAACCCATCACTGCTCATCAAGCAAAGAATGGCGTGTTTATCTCGGAGATAAACAATCCCCTATATTTCACGATAACAAGACACGACATCAGGCCATTCAACATGAACCAGGACATCATCACATTACAGATACGGTTCAATCACAACCTCAGGAGGGCACTGGGGATTCACAAATGTTTTCTCAACTTCAAAGTCTGGACGACCTTACGGCCTCAGACTGGTCTTTTCTTAAGGGTCTTTAAATTCCAAGTTCTCAAGCATCTGAAGCATTTAGAAGTAATTTCAATTAATAATGTAATTAGAGCAGTTGATCATGTATTATATAACGTACTTGTAAACACAATTTCCGTTACGGAAAATCATGAAATAAAATTCAATATTTATTAA
Protein Sequence MDSRTGEPITAHQAKNGVFISEINNPLYFTITRHDIRPFNMNQDIITLQIRFNHNLRRALGIHKCFLNFKVWTTLRPQTGLFLRVFKFQVLKHLKHLEVISINNVIRAVDHVLYNVLVNTISVTENHEIKFNIY

NCBI Accession YP_009345716.1
Location 1217-1624
Protein Name transcriptional activator protein
Coding Region ATGCGATCTTCGTCACCATCGACAACCCATTGTTCACAGGTACCAATCAAAGTACAACACAGAGCGGCCAAGAAGAAAGCAGTGAGACGTAAACGAGTAGACCTAGACTGCGGCTGTTCATACTACCTCCACATCGACTGCATCAACCATGGATTCACGCACAGGGGAACCCATCACTGCTCATCAAGCAAAGAATGGCGTGTTTATCTCGGAGATAAACAATCCCCTATATTTCACGATAACAAGACACGACATCAGGCCATTCAACATGAACCAGGACATCATCACATTACAGATACGGTTCAATCACAACCTCAGGAGGGCACTGGGGATTCACAAATGTTTTCTCAACTTCAAAGTCTGGACGACCTTACGGCCTCAGACTGGTCTTTTCTTAAGGGTCTTTAA
Protein Sequence MRSSSPSTTHCSQVPIKVQHRAAKKKAVRRKRVDLDCGCSYYLHIDCINHGFTHRGTHHCSSSKEWRVYLGDKQSPIFHDNKTRHQAIQHEPGHHHITDTVQSQPQEGTGDSQMFSQLQSLDDLTASDWSFLKGL

NCBI Accession YP_009345717.1
Location 1533-2612
Protein Name replication associated protein
Coding Region ATGGCTCCTCCAAAGCGTTTTAGAGTTAATTCCAAAAATTATTTCCTTACTTTCCCAAAATGTTCTCTAACCAAAGACGAAGCCCTCGAACAACTACTTAAACTCCAAACCCCAACAAATAAAAAATACATTAAAATCTGCAGAGAGTTGCACGAAGATGGCGAACCTCATTTACATGTGCTTCTGCAGTTCGAAGGAAAATTCAACTGCCAAAATCAGAGATTCTTCGACCTCGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGCGATACACTCGAATGGGGAGAATTCCAGATCGACGGACGATCTGCAAGGGGCGGGCAGCAATCAGCCAACGACGCTTACGCAAAAGCACTTAACGCAGGAAGTAAGCCGGCGGCTCTTAATGTAATAAGGGAATTAGCCCCTAAAGATTTTATTTTACAATTTCATAATTTAAATAATAATTTAGATAGGATTTTTGAAGAGCCTCCGGCTCCTTATATTTCTCCTTTTTCTTCTTCTTCTTTCGATCAAGTTCCGGAGGAACTTGAGACATGGGTTTCTGAGAACGTCATGCCTTCCGCTGCGCGGCCCTGGAGGCCCAACAGTATTGTCATTGAGGGAGAAAGCCGGACCGGGAAGACCATATGGGCCCGTTCTCTAGGCCCACATAACTACTTATGTGGACACCTTGACCTAAGCCCAAAGGTCTACAGCAACGATGCGTGGTACAACGTCATTGATGACGTAGACCCGCACTATCTAAAGCACTTCAAGGAATTTATGGGTGCCCAACGAGACTGGCAAAGCAACACAAAGTACGGGAAACCAATCCAAATTAAAGGCGGGATTCCCACAATCTTTCTATGCAATCCAGGGCCAACATCCTCATATAAAGAATATCTCGACGAGGAAAAAAACGCAGCACTAAGAGCCTGGGCTATTAAAAATGCGATCTTCGTCACCATCGACAACCCATTGTTCACAGGTACCAATCAAAGTACAACACAGAGCGGCCAAGAAGAAAGCAGTGAGACGTAA
Protein Sequence MAPPKRFRVNSKNYFLTFPKCSLTKDEALEQLLKLQTPTNKKYIKICRELHEDGEPHLHVLLQFEGKFNCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQSANDAYAKALNAGSKPAALNVIRELAPKDFILQFHNLNNNLDRIFEEPPAPYISPFSSSSFDQVPEELETWVSENVMPSAARPWRPNSIVIEGESRTGKTIWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNAALRAWAIKNAIFVTIDNPLFTGTNQSTTQSGQEESSET

NCBI Accession YP_009345718.1
Location 2165-2455
Protein Name C4 protein
Coding Region ATGGCGAACCTCATTTACATGTGCTTCTGCAGTTCGAAGGAAAATTCAACTGCCAAAATCAGAGATTCTTCGACCTCGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGCGATACACTCGAATGGGGAGAATTCCAGATCGACGGACGATCTGCAAGGGGCGGGCAGCAATCAGCCAACGACGCTTACGCAAAAGCACTTAACGCAGGAAGTAAGCCGGCGGCTCTTAATGTAA
Protein Sequence MANLIYMCFCSSKENSTAKIRDSSTSYPQPGQHISIRTFRELNPAPTSSPTSTRTAIHSNGENSRSTDDLQGAGSNQPTTLTQKHLTQEVSRRLLM