Tomato leaf curl Burkina Faso virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_002005645.1 |
Isolate |
Burkina Faso |
Release date |
2017/2/23 |
Submitter |
Ouattara,A., Tiendrebeogo,F., Lefeuvre,P., Claverie,S., Hoareau,M., Traore,E.V., Barro,N., Traore,O., Lett,J.M., Lett,J.-M. |
Host |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCCCCCCAAAAAAGAAACTGGCCCCACGCACTAATTTTTGTCGACCAATCATATCTCTTCCTGGAAGGTTAGATATTTGTTTTTGTCTCTATATACTTCCTCCGCAAGTTTGGGCCCTGTCCAACATGTGGGATCCACTTTTGAATGAGTTCCCCGATTCTGTTCACGGATTTCGTTGTATGCTAGCTATCAAATATTTGCAGGCCGTCGAGGAAACGTACGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTGATCTCTGTCGTTAGGGCTCGAGATTATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGTTGTCCCCATTGCCCCAGGCACAAACAGGCGTCGATCATGGACTTACCGCCCCATGTATCGAAAGCCTCGGATGTACAGAATGTTCAGAAGTCCTGATGTTCCTCGTGGTTGCGAGGGCCCTTGTAAGGTTCAGTCGTATGAGCAGAGGGATGATGTTAAGCACACTGGTATCGTTCGTTGCGTTAGTGATGTCACACGTGGTTCTGGTATTACTCATCGTGTCGGAAAAAGATTTTGTATTAAATCGATATATGTTCTTGGAAAGGTCTGGATGGATGAAAATATTAAGAAGCAGAATCATACTAATCAGGTTATGTTCTTTTTAGTTCGTGATAGACGTCCCTATGGGAATAGCCCGATGGATTTTGGTCAGGTTTTTAATATGTTCGATAATGAGCCCAGTACTGCTACTGTGAAGAATGATTTGCGTGACAGATATCAAGTCTTGAGGAAATTTCATGCTACTGTGATAGGTGGACCCTCGGGCATGAAAGAGCAGGCTTTAGTTAAGAGATTTTTTAGGGTTAACACTCATGTTGTTTACAATCACCAGGAAGCAGCAAAATACGAGAATCATACGGAGAACGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAATCCTGTGTATGCAACATTGAAGATACGCATCTATTTTTATGATGCTGTTACTAATTAATAAATATTGAATTTTATTTCATGATTTTCCGTAACGGAAATTGTGTTTACAAGTACGTTATATAATACATGATCAACTGCTCTAATTACATTATTAATTGAAATTACTTCTAAATGCTTCAGATGCTTGAGAACTTGGAATTTAAAGACCCTTAAGAAAAGACCAGTCTGAGGCCGTAAGGTCGTCCAGACTTTGAAGTTGAGAAAACATTTGTGAATCCCCAGTGCCCTCCTGAGGTTGTGATTGAACCGTATCTGTAATGTGATGATGTCCTGGTTCATGTTGAATGGCCTGATGTCGTGTCTTGTTATCGTGAAATATAGGGGATTGTTTATCTCCGAGATAAACACGCCATTCTTTGCTTGATGAGCAGTGATGGGTTCCCCTGTGCGTGAATCCATGGTTGATGCAGTCGATGTGGAGGTAGTATGAACAGCCGCAGTCTAGGTCTACTCGTTTACGTCTCACTGCTTTCTTCTTGGCCGCTCTGTGTTGTACTTTGATTGGTACCTGTGAACAATGGGTTGTCGATGGTGACGAAGATCGCATTTTTAATAGCCCAGGCTCTTAGTGCTGCGTTTTTTTCCTCGTCGAGATATTCTTTATATGAGGATGTTGGCCCTGGATTGCATAGAAAGATTGTGGGAATCCCGCCTTTAATTTGGATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAGTCTCGTTGGGCACCCATAAATTCCTTGAAGTGCTTTAGATAGTGCGGGTCTACGTCATCAATGACGTTGTACCACGCATCGTTGCTGTAGACCTTTGGGCTTAGGTCAAGGTGTCCACATAAGTAGTTATGTGGGCCTAGAGAACGGGCCCATATGGTCTTCCCGGTCCGGCTTTCTCCCTCAATGACAATACTGTTGGGCCTCCAGGGCCGCGCAGCGGAAGGCATGACGTTCTCAGAAACCCATGTCTCAAGTTCCTCCGGAACTTGATCGAAAGAAGAAGAAGAAAAAGGAGAAATATAAGGAGCCGGAGGCTCTTCAAAAATCCTATCTAAATTATTATTTAAATTATGAAATTGTAAAATAAAATCTTTAGGGGCTAATTCCCTTATTACATTAAGAGCCGCCGGCTTACTTCCTGCGTTAAGTGCTTTTGCGTAAGCGTCGTTGGCTGATTGCTGCCCGCCCCTTGCAGATCGTCCGTCGATCTGGAATTCTCCCCATTCGAGTGTATCGCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACGAGGTCGAAGAATCTCTGATTTTGGCAGTTGAATTTTCCTTCGAACTGCAGAAGCACATGTAAATGAGGTTCGCCATCTTCGTGCAACTCTCTGCAGATTTTAATGTATTTTTTATTTGTTGGGGTTTGGAGTTTAAGTAGTTGTTCGAGGGCTTCGTCTTTGGTTAGAGAACATTTTGGGAAAGTAAGGAAATAATTTTTGGAATTAACTCTAAAACGCTTTGGAGGAGCCATTTGGTCAACTAGCACCGATTGACTGCCTCAGCTCTCTATCCCGAGCAATTGGGGTTTGGGGTCTTATTTATAGTGTAGCCCCAAATGGCATTTTGGGAATTTAGTAAAGTTCCTTCCTCGTTAATTCGAAATTCAAATTTCGAATTCCCCTAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
YP_009345713.1
|
Location
|
139-489 |
Protein Name
|
movement protein |
Coding Region
|
ATGTGGGATCCACTTTTGAATGAGTTCCCCGATTCTGTTCACGGATTTCGTTGTATGCTAGCTATCAAATATTTGCAGGCCGTCGAGGAAACGTACGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTGATCTCTGTCGTTAGGGCTCGAGATTATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGTTGTCCCCATTGCCCCAGGCACAAACAGGCGTCGATCATGGACTTACCGCCCCATGTATCGAAAGCCTCGGATGTACAGAATGTTCAGAAGTCCTGA |
Protein Sequence
|
MWDPLLNEFPDSVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDLISVVRARDYVEATRRYNHFHARLEGSSKAELRQPIQQPCCCPHCPRHKQASIMDLPPHVSKASDVQNVQKS |
NCBI Accession
|
YP_009345714.1
|
Location
|
299-1075 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGTTGTCCCCATTGCCCCAGGCACAAACAGGCGTCGATCATGGACTTACCGCCCCATGTATCGAAAGCCTCGGATGTACAGAATGTTCAGAAGTCCTGATGTTCCTCGTGGTTGCGAGGGCCCTTGTAAGGTTCAGTCGTATGAGCAGAGGGATGATGTTAAGCACACTGGTATCGTTCGTTGCGTTAGTGATGTCACACGTGGTTCTGGTATTACTCATCGTGTCGGAAAAAGATTTTGTATTAAATCGATATATGTTCTTGGAAAGGTCTGGATGGATGAAAATATTAAGAAGCAGAATCATACTAATCAGGTTATGTTCTTTTTAGTTCGTGATAGACGTCCCTATGGGAATAGCCCGATGGATTTTGGTCAGGTTTTTAATATGTTCGATAATGAGCCCAGTACTGCTACTGTGAAGAATGATTTGCGTGACAGATATCAAGTCTTGAGGAAATTTCATGCTACTGTGATAGGTGGACCCTCGGGCATGAAAGAGCAGGCTTTAGTTAAGAGATTTTTTAGGGTTAACACTCATGTTGTTTACAATCACCAGGAAGCAGCAAAATACGAGAATCATACGGAGAACGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAATCCTGTGTATGCAACATTGAAGATACGCATCTATTTTTATGATGCTGTTACTAATTAA |
Protein Sequence
|
MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAVVPIAPGTNRRRSWTYRPMYRKPRMYRMFRSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGSGITHRVGKRFCIKSIYVLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDNEPSTATVKNDLRDRYQVLRKFHATVIGGPSGMKEQALVKRFFRVNTHVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDAVTN |
NCBI Accession
|
YP_009345715.1
|
Location
|
1072-1476 |
Protein Name
|
replication enhancer protein |
Coding Region
|
ATGGATTCACGCACAGGGGAACCCATCACTGCTCATCAAGCAAAGAATGGCGTGTTTATCTCGGAGATAAACAATCCCCTATATTTCACGATAACAAGACACGACATCAGGCCATTCAACATGAACCAGGACATCATCACATTACAGATACGGTTCAATCACAACCTCAGGAGGGCACTGGGGATTCACAAATGTTTTCTCAACTTCAAAGTCTGGACGACCTTACGGCCTCAGACTGGTCTTTTCTTAAGGGTCTTTAAATTCCAAGTTCTCAAGCATCTGAAGCATTTAGAAGTAATTTCAATTAATAATGTAATTAGAGCAGTTGATCATGTATTATATAACGTACTTGTAAACACAATTTCCGTTACGGAAAATCATGAAATAAAATTCAATATTTATTAA |
Protein Sequence
|
MDSRTGEPITAHQAKNGVFISEINNPLYFTITRHDIRPFNMNQDIITLQIRFNHNLRRALGIHKCFLNFKVWTTLRPQTGLFLRVFKFQVLKHLKHLEVISINNVIRAVDHVLYNVLVNTISVTENHEIKFNIY |
NCBI Accession
|
YP_009345716.1
|
Location
|
1217-1624 |
Protein Name
|
transcriptional activator protein |
Coding Region
|
ATGCGATCTTCGTCACCATCGACAACCCATTGTTCACAGGTACCAATCAAAGTACAACACAGAGCGGCCAAGAAGAAAGCAGTGAGACGTAAACGAGTAGACCTAGACTGCGGCTGTTCATACTACCTCCACATCGACTGCATCAACCATGGATTCACGCACAGGGGAACCCATCACTGCTCATCAAGCAAAGAATGGCGTGTTTATCTCGGAGATAAACAATCCCCTATATTTCACGATAACAAGACACGACATCAGGCCATTCAACATGAACCAGGACATCATCACATTACAGATACGGTTCAATCACAACCTCAGGAGGGCACTGGGGATTCACAAATGTTTTCTCAACTTCAAAGTCTGGACGACCTTACGGCCTCAGACTGGTCTTTTCTTAAGGGTCTTTAA |
Protein Sequence
|
MRSSSPSTTHCSQVPIKVQHRAAKKKAVRRKRVDLDCGCSYYLHIDCINHGFTHRGTHHCSSSKEWRVYLGDKQSPIFHDNKTRHQAIQHEPGHHHITDTVQSQPQEGTGDSQMFSQLQSLDDLTASDWSFLKGL |
NCBI Accession
|
YP_009345717.1
|
Location
|
1533-2612 |
Protein Name
|
replication associated protein |
Coding Region
|
ATGGCTCCTCCAAAGCGTTTTAGAGTTAATTCCAAAAATTATTTCCTTACTTTCCCAAAATGTTCTCTAACCAAAGACGAAGCCCTCGAACAACTACTTAAACTCCAAACCCCAACAAATAAAAAATACATTAAAATCTGCAGAGAGTTGCACGAAGATGGCGAACCTCATTTACATGTGCTTCTGCAGTTCGAAGGAAAATTCAACTGCCAAAATCAGAGATTCTTCGACCTCGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGCGATACACTCGAATGGGGAGAATTCCAGATCGACGGACGATCTGCAAGGGGCGGGCAGCAATCAGCCAACGACGCTTACGCAAAAGCACTTAACGCAGGAAGTAAGCCGGCGGCTCTTAATGTAATAAGGGAATTAGCCCCTAAAGATTTTATTTTACAATTTCATAATTTAAATAATAATTTAGATAGGATTTTTGAAGAGCCTCCGGCTCCTTATATTTCTCCTTTTTCTTCTTCTTCTTTCGATCAAGTTCCGGAGGAACTTGAGACATGGGTTTCTGAGAACGTCATGCCTTCCGCTGCGCGGCCCTGGAGGCCCAACAGTATTGTCATTGAGGGAGAAAGCCGGACCGGGAAGACCATATGGGCCCGTTCTCTAGGCCCACATAACTACTTATGTGGACACCTTGACCTAAGCCCAAAGGTCTACAGCAACGATGCGTGGTACAACGTCATTGATGACGTAGACCCGCACTATCTAAAGCACTTCAAGGAATTTATGGGTGCCCAACGAGACTGGCAAAGCAACACAAAGTACGGGAAACCAATCCAAATTAAAGGCGGGATTCCCACAATCTTTCTATGCAATCCAGGGCCAACATCCTCATATAAAGAATATCTCGACGAGGAAAAAAACGCAGCACTAAGAGCCTGGGCTATTAAAAATGCGATCTTCGTCACCATCGACAACCCATTGTTCACAGGTACCAATCAAAGTACAACACAGAGCGGCCAAGAAGAAAGCAGTGAGACGTAA |
Protein Sequence
|
MAPPKRFRVNSKNYFLTFPKCSLTKDEALEQLLKLQTPTNKKYIKICRELHEDGEPHLHVLLQFEGKFNCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQSANDAYAKALNAGSKPAALNVIRELAPKDFILQFHNLNNNLDRIFEEPPAPYISPFSSSSFDQVPEELETWVSENVMPSAARPWRPNSIVIEGESRTGKTIWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNAALRAWAIKNAIFVTIDNPLFTGTNQSTTQSGQEESSET |
NCBI Accession
|
YP_009345718.1
|
Location
|
2165-2455 |
Protein Name
|
C4 protein |
Coding Region
|
ATGGCGAACCTCATTTACATGTGCTTCTGCAGTTCGAAGGAAAATTCAACTGCCAAAATCAGAGATTCTTCGACCTCGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGCGATACACTCGAATGGGGAGAATTCCAGATCGACGGACGATCTGCAAGGGGCGGGCAGCAATCAGCCAACGACGCTTACGCAAAAGCACTTAACGCAGGAAGTAAGCCGGCGGCTCTTAATGTAA |
Protein Sequence
|
MANLIYMCFCSSKENSTAKIRDSSTSYPQPGQHISIRTFRELNPAPTSSPTSTRTAIHSNGENSRSTDDLQGAGSNQPTTLTQKHLTQEVSRRLLM |