Tomato leaf curl Anjouan virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_002986935.1 |
| Isolate |
Comoros:Anjouan, Ouani |
| Release date |
2018/8/26 |
| Submitter |
Lefeuvre,P., Martin,D.P., Hoareau,M., Naze,F., Becker,N., Delatte,H., Reynaud,B., Lett,J.M. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCCCCGAAAAAAGAAGATGGTCCCTGCGCACCAAATTTTGTCAGCCAATCAGAATTGCGCTTGAAAGCTTGTTATTGTTTTTTTGTCTTTATATACTTGGTCCCCAAGATTTACTCTCAATCAGTATGTGGGATCCACTCTTGAACGATTTCCCAGACTCTGTTCACGGGTTTCGTTGTATGCTTGCCGTTAAATACTTGCAGGCCATAGAAGAAACGTACGAGCCCAATACATTGGGCCACGATCTAATCCGTGATCTCATTTGTGTTATCAGGGCCCGTGACTATGTCGAAGCGACCCGGAGATATACTTATTTCCACTCCCGTCTCGAAAGTGCGTCGAAGGCTGAACTTCGACAGCCCGTTTACCAGCCGTGCTGTTGTCCCCACTGCCCCAGGCATAAGCAGACGTCGCGCATGGACTTACAGGCCCATGTACCGAAAGCCCAAGATATACAGAATGTACAAAAGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCATGTAAGGTCCAATCGTATGAGCAGAGGGATGATGTCAAGCATACCGGTATTGTTCGTTGTGTTAGTGATGTTACGCGTGGTTCGGGTATTACCCATAGAGTTGGCAAGAGGTTTTGTATTAAGTCTATTTACTTTTTAGGGAAGATTTGGATGGATGAAAACATTAAGAAACAAAATCATACTAATCAGGTTATGTTTTTTCTCGTTCGTGATAGAAGGCCATATGGCTCAGCCCCAATGGATTTTGGACAGGTTTTTAACATGTTTGATAATGAGCCCAGTACAGCTACGGTGAAGAATGATTTGAGAGACAGGTTTCAAGTTATGCGCAAATTTCATGCAACTGTTGTTGGTGGACCCTCGGGAATGAAGGAGCAGGCGTTAGTTAAGAGATTTTTTAGGATTAATAGTCATGTAACTTATAATCATCAGGAGGCAGCGAAGTATGAAAATCATACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCGAATCCAGTGTATGCCACTCTTAAGATACGGATCTATTTCTACGATTCGGTCAGCAATTAATAAATATTGAATTTTATTTCATGATTCTCCGTAACTTGGAGTGTATTTACAAGTACATCATATAATACATAATCAACTGCTTTTATTACAGAATTAATTGAAACTACACCTAATCTATCTAAATACCTTAAAACATGAACTTTAAATACTCTTAAGAAATGACCAGTCTGAGGGCGTAAGCTCGTCCAGACCTTGAAGTTGAGAAAACATTTGTGAATCCCCAATTCCTTCCTTAAGTTGTGGTTGAACCGTATCTGGATTAATAGGATGTCTTGATTCATGTTGAACGGTCGACTGTGGTGGTAGATTATCTTGAAATATAGGGGATTTTGTATCTCCCAGATAAAAACGCCACTCTGCGTTTGAGCTGCAGTGATGATTTCCCCGGTGCGTAAATCCATGGTTGGTGCAGTTTATGTGTAGATAGTATGAGCAGCCACAGTTTAGGTCTATGCGCTTACGTCGAATGGGTGTCTTCTTCGCTATGCGGTGTTTGACCTTGATTGGTATTTGAGAACAGTGGCTCGTGGAGGGTGACGAAGGTTGCATTCTTTGTTGCCCAGGCTTTCAAGGGTGCGTTCTTATCCTCCTCTAAGTATTCTTTATAGGAGGATGTTGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAATTGGCTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCTCCCATAAATTCTTTAAAGTGTTTTAAATAATGCGGGTCTACGTCATCAATGACGTTATACCACGCATCATTGCTGTACACCTTTGGGCTGAGATCGAGATGACCACACAAATAGTTGTGTGGTCCCAGAGACCTAGCCCACATGGTCTTGCCTGTACGACTATCACCCTCTAATACAATACTCATCGGTCTCCACGGCCGCGCAGCGGCATCCATGACATTCTCCGACACCCAGATTTCAAGTTCTTCTGGAACTTGATCAAAAGAAGAAGTAAGAAAATTGGAAACATATGGATTTGGTGGAGTCATGAAAATTTTATCAGCATTTGCTGACAGGTTATGATATTGTAAGAAGAAAGATTTTGGGTCTTTCTCCTTAATTATCTGAAGTGCCTCTTCCTTCGAAGATGCATTTAGTGCATCTGCGTATACTTGGGCTAGATGCTGGCCCTCCCCCCGTGCACTTCTGGCATCGACCTGGAAAACTCCATAGTCAAGAAATTCCCCTCCTTTCTCAATATAGGCCTTGACATCAGAGGATGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTTGGGATACCAGGTCGAAGAATCTTTGATTTGTGCACTGGAATTTCCCTTCGAATTGGATGAGTACGTGGAGATGAGGCAACCCATCTTGGTGTAGCTCTCTGCAGACTCTTATGAATTTTATATTTGTTGGGTAGGAGAAAGATTTAATTTGGGCTAATGCTTCCTCTTTGGTGATGGAGCACTGAGGATAAGTTATGAAATAATTTTTTGCGTTTATTTTAAAACGACCGGCTCTTGGCATTTTGAGTTGTCGTTTTGAATCGGGGTACACACAACTTACCAGGATATCGGTGTAAAGGGGTACAATATATAGTGTGTACTCCAATGGCATATCTGTAATTTTCAAGATCTACATTCTAAATTTGTAAATTCGAAATTCAAACCCTAAAAGCGGCCATCCGATTAATATT
Gene Information
|
NCBI Accession
|
YP_009508174.1
|
|
Location
|
139-489 |
|
Gene Name
|
v2 |
|
Protein Name
|
V2 protein |
|
Coding Region
|
ATGTGGGATCCACTCTTGAACGATTTCCCAGACTCTGTTCACGGGTTTCGTTGTATGCTTGCCGTTAAATACTTGCAGGCCATAGAAGAAACGTACGAGCCCAATACATTGGGCCACGATCTAATCCGTGATCTCATTTGTGTTATCAGGGCCCGTGACTATGTCGAAGCGACCCGGAGATATACTTATTTCCACTCCCGTCTCGAAAGTGCGTCGAAGGCTGAACTTCGACAGCCCGTTTACCAGCCGTGCTGTTGTCCCCACTGCCCCAGGCATAAGCAGACGTCGCGCATGGACTTACAGGCCCATGTACCGAAAGCCCAAGATATACAGAATGTACAAAAGCCCTGA |
|
Protein Sequence
|
MWDPLLNDFPDSVHGFRCMLAVKYLQAIEETYEPNTLGHDLIRDLICVIRARDYVEATRRYTYFHSRLESASKAELRQPVYQPCCCPHCPRHKQTSRMDLQAHVPKAQDIQNVQKP |
|
NCBI Accession
|
YP_009508175.1
|
|
Location
|
299-1075 |
|
Gene Name
|
cp |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGTCGAAGCGACCCGGAGATATACTTATTTCCACTCCCGTCTCGAAAGTGCGTCGAAGGCTGAACTTCGACAGCCCGTTTACCAGCCGTGCTGTTGTCCCCACTGCCCCAGGCATAAGCAGACGTCGCGCATGGACTTACAGGCCCATGTACCGAAAGCCCAAGATATACAGAATGTACAAAAGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCATGTAAGGTCCAATCGTATGAGCAGAGGGATGATGTCAAGCATACCGGTATTGTTCGTTGTGTTAGTGATGTTACGCGTGGTTCGGGTATTACCCATAGAGTTGGCAAGAGGTTTTGTATTAAGTCTATTTACTTTTTAGGGAAGATTTGGATGGATGAAAACATTAAGAAACAAAATCATACTAATCAGGTTATGTTTTTTCTCGTTCGTGATAGAAGGCCATATGGCTCAGCCCCAATGGATTTTGGACAGGTTTTTAACATGTTTGATAATGAGCCCAGTACAGCTACGGTGAAGAATGATTTGAGAGACAGGTTTCAAGTTATGCGCAAATTTCATGCAACTGTTGTTGGTGGACCCTCGGGAATGAAGGAGCAGGCGTTAGTTAAGAGATTTTTTAGGATTAATAGTCATGTAACTTATAATCATCAGGAGGCAGCGAAGTATGAAAATCATACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCGAATCCAGTGTATGCCACTCTTAAGATACGGATCTATTTCTACGATTCGGTCAGCAATTAA |
|
Protein Sequence
|
MSKRPGDILISTPVSKVRRRLNFDSPFTSRAVVPTAPGISRRRAWTYRPMYRKPKIYRMYKSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGSGITHRVGKRFCIKSIYFLGKIWMDENIKKQNHTNQVMFFLVRDRRPYGSAPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMRKFHATVVGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN |
|
NCBI Accession
|
YP_009508176.1
|
|
Location
|
1072-1476 |
|
Gene Name
|
c3 |
|
Protein Name
|
C3 protein |
|
Coding Region
|
ATGGATTTACGCACCGGGGAAATCATCACTGCAGCTCAAACGCAGAGTGGCGTTTTTATCTGGGAGATACAAAATCCCCTATATTTCAAGATAATCTACCACCACAGTCGACCGTTCAACATGAATCAAGACATCCTATTAATCCAGATACGGTTCAACCACAACTTAAGGAAGGAATTGGGGATTCACAAATGTTTTCTCAACTTCAAGGTCTGGACGAGCTTACGCCCTCAGACTGGTCATTTCTTAAGAGTATTTAAAGTTCATGTTTTAAGGTATTTAGATAGATTAGGTGTAGTTTCAATTAATTCTGTAATAAAAGCAGTTGATTATGTATTATATGATGTACTTGTAAATACACTCCAAGTTACGGAGAATCATGAAATAAAATTCAATATTTATTAA |
|
Protein Sequence
|
MDLRTGEIITAAQTQSGVFIWEIQNPLYFKIIYHHSRPFNMNQDILLIQIRFNHNLRKELGIHKCFLNFKVWTSLRPQTGHFLRVFKVHVLRYLDRLGVVSINSVIKAVDYVLYDVLVNTLQVTENHEIKFNIY |
|
NCBI Accession
|
YP_009508177.1
|
|
Location
|
1217-1624 |
|
Gene Name
|
c2 |
|
Protein Name
|
C2 protein |
|
Coding Region
|
ATGCAACCTTCGTCACCCTCCACGAGCCACTGTTCTCAAATACCAATCAAGGTCAAACACCGCATAGCGAAGAAGACACCCATTCGACGTAAGCGCATAGACCTAAACTGTGGCTGCTCATACTATCTACACATAAACTGCACCAACCATGGATTTACGCACCGGGGAAATCATCACTGCAGCTCAAACGCAGAGTGGCGTTTTTATCTGGGAGATACAAAATCCCCTATATTTCAAGATAATCTACCACCACAGTCGACCGTTCAACATGAATCAAGACATCCTATTAATCCAGATACGGTTCAACCACAACTTAAGGAAGGAATTGGGGATTCACAAATGTTTTCTCAACTTCAAGGTCTGGACGAGCTTACGCCCTCAGACTGGTCATTTCTTAAGAGTATTTAA |
|
Protein Sequence
|
MQPSSPSTSHCSQIPIKVKHRIAKKTPIRRKRIDLNCGCSYYLHINCTNHGFTHRGNHHCSSNAEWRFYLGDTKSPIFQDNLPPQSTVQHESRHPINPDTVQPQLKEGIGDSQMFSQLQGLDELTPSDWSFLKSI |
|
NCBI Accession
|
YP_009508178.1
|
|
Location
|
1533-2702 |
|
Gene Name
|
rep |
|
Protein Name
|
replication associated protein |
|
Coding Region
|
ATGCCATTGGAGTACACACTATATATTGTACCCCTTTACACCGATATCCTGGTAAGTTGTGTGTACCCCGATTCAAAACGACAACTCAAAATGCCAAGAGCCGGTCGTTTTAAAATAAACGCAAAAAATTATTTCATAACTTATCCTCAGTGCTCCATCACCAAAGAGGAAGCATTAGCCCAAATTAAATCTTTCTCCTACCCAACAAATATAAAATTCATAAGAGTCTGCAGAGAGCTACACCAAGATGGGTTGCCTCATCTCCACGTACTCATCCAATTCGAAGGGAAATTCCAGTGCACAAATCAAAGATTCTTCGACCTGGTATCCCAAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCATCCTCTGATGTCAAGGCCTATATTGAGAAAGGAGGGGAATTTCTTGACTATGGAGTTTTCCAGGTCGATGCCAGAAGTGCACGGGGGGAGGGCCAGCATCTAGCCCAAGTATACGCAGATGCACTAAATGCATCTTCGAAGGAAGAGGCACTTCAGATAATTAAGGAGAAAGACCCAAAATCTTTCTTCTTACAATATCATAACCTGTCAGCAAATGCTGATAAAATTTTCATGACTCCACCAAATCCATATGTTTCCAATTTTCTTACTTCTTCTTTTGATCAAGTTCCAGAAGAACTTGAAATCTGGGTGTCGGAGAATGTCATGGATGCCGCTGCGCGGCCGTGGAGACCGATGAGTATTGTATTAGAGGGTGATAGTCGTACAGGCAAGACCATGTGGGCTAGGTCTCTGGGACCACACAACTATTTGTGTGGTCATCTCGATCTCAGCCCAAAGGTGTACAGCAATGATGCGTGGTATAACGTCATTGATGACGTAGACCCGCATTATTTAAAACACTTTAAAGAATTTATGGGAGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGGAAGCCAATTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCAACATCCTCCTATAAAGAATACTTAGAGGAGGATAAGAACGCACCCTTGAAAGCCTGGGCAACAAAGAATGCAACCTTCGTCACCCTCCACGAGCCACTGTTCTCAAATACCAATCAAGGTCAAACACCGCATAGCGAAGAAGACACCCATTCGACGTAA |
|
Protein Sequence
|
MPLEYTLYIVPLYTDILVSCVYPDSKRQLKMPRAGRFKINAKNYFITYPQCSITKEEALAQIKSFSYPTNIKFIRVCRELHQDGLPHLHVLIQFEGKFQCTNQRFFDLVSQTRSAHFHPNIQGAKSSSDVKAYIEKGGEFLDYGVFQVDARSARGEGQHLAQVYADALNASSKEEALQIIKEKDPKSFFLQYHNLSANADKIFMTPPNPYVSNFLTSSFDQVPEELEIWVSENVMDAAARPWRPMSIVLEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLEEDKNAPLKAWATKNATFVTLHEPLFSNTNQGQTPHSEEDTHST |
|
NCBI Accession
|
YP_009508179.1
|
|
Location
|
2222-2455 |
|
Gene Name
|
c4 |
|
Protein Name
|
C4 protein |
|
Coding Region
|
ATGGGTTGCCTCATCTCCACGTACTCATCCAATTCGAAGGGAAATTCCAGTGCACAAATCAAAGATTCTTCGACCTGGTATCCCAAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCATCCTCTGATGTCAAGGCCTATATTGAGAAAGGAGGGGAATTTCTTGACTATGGAGTTTTCCAGGTCGATGCCAGAAGTGCACGGGGGGAGGGCCAGCATCTAG |
|
Protein Sequence
|
MGCLISTYSSNSKGNSSAQIKDSSTWYPKPGQHISIRTFRELNHPLMSRPILRKEGNFLTMEFSRSMPEVHGGRASI |