Tomato golden vein virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002867655.1
Isolate Brazil: Goias
Release date 2018/8/26
Submitter Albuquerque,L.C., Varsani,A., Fernandes,F.R., Pinheiro,B., Martin,D.P., de Tarso Oliveira Ferreira,P., Lemos,T.O., Inoue-Nagata,A.K., Martins,D.P., Ferreira,P.T.O.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038807
ACCGGATGGCCGCGCGATTTTTTAAAGTGGTCCCACTGTGAGTGACCAATCAGATTGTGTCTTGGACGGTTATTTATTTCGAAATACTTAGGCGCTAAGTTGTTAAAGTTGTATAAATTAGACATTCATAAGTGGTCGACATATTTTAATTCAAAATGCCAAAGCGAGATGCCCCATGGCGTATAGTGGCAGGGACCACGAAAGTATCCCGCTCTTCTAATTATTCACCTCGGGGAGGTATACCCAAGCGGGATGCTTGGGTAAACAGGCCCATGTACAGGAAGCCCAGGATATATCGTACGTTGAGAGGGCCTGATGTTCCTAAAGGGTGTGAAGGCCCATGTAAAGTTCAATCCTATGAGCAACGTCATGACATTTCTCATCTTGGCAAGGTGATGTGTATCTCTGATGTGACACGTGGTAATGGTATTACACACCGTGTTGGTAAGCGTTTTTGCGTTAAGTCTGTGTACATATTGGGTAAGATATGGATGGACGAAAATATTAAACTGAAGAACCATACCAACAGTGTTATTTTTTGGTTAGTGAGGGATCGTAGACCCTATGGGACACCTATGGATTTTGGTCAGGTGTTTAACATGTTTGATAATGAGCCTAGTACTGCTACGGTGAAGAACGATCTTCGTGATCGTTATCAAGTCATTCATCGATTCAATGCTAAGGTTACGGGTGGACAGTATGCTAGCAACGAGCAAGCTCTTGTTCGGCGTTTCTGGAAGGTCAATAATCATGTAGTTTATAATCATCAGGAAGCCAGCGAAGTACGAGAATCCATACCGGAGAATGCTCTGTTATTGTATATGGCATGTACACATGCCTCTAATCCCGTGTATGCTACTTTGAAAATTCGGATCTATTTTTATGATTCGATTTCAAATTAATAAAGTTTAAATTTTATTGAATGATTTTCGAGTACATAATTTACATAAGATTTGTCTGTTGCGAAACGAACAGCTCTGATTACATTGTTAATGGAAATAATACCTAATTGGTTCAGATACAATAAAACGAAATATCTAAATCTAGTTAAATATGTCATCCCAGAAGCTCTCAGGGATGTCGTCCAGACTTGGAAATTTAGAAATGCCTTGTGGAGACCCAACGCTTTCCGCAGGTTGTGGTTGAAACGTATCTGCACATGGTATATCCTGGTCGTTGTATAATAGGGGTCCTCGACGTTGGTTATCTTGAAATAGAGGGGATTTGTAATCTCCCAAATAAAGACGCCATTCTCTGCTTGAGGCACAGTGATGGGTTCCGCGGTGCGTGAATCCATTATTTCTACAGTTGATGTGGATGTATATGGAGCAGCCGCAGTTTAGGTCTATGCGTTTACGCCTGGTTGTTTTCTGTTTGGCGGCTCTGTGCCGTGGCTTGATAGAGGGGGGAGTTGAGGAAGATGAATTTAGCATTATGCAGTGTCCAAGCTCTTAGAGATGCATTTTCATGTTTGTCAAGGAAGTCTTTATAACTAGCCCCCTCTCCTGGATTGCAAAGCACGATTGATGGGATCCCTCCTTTAATTTGAACCGGCTTTCCGTACTTGCAATTGCTTTGCCAGTCACGCTGGGACCCAATTAGTTCTTTCCAGTGCTTCATTTTTAGATAATGCGGAGTGACATCATCAATGACGTTATACTCCACTTCATTTGAATAAACTTTAGAATTAAAATCCAAGTGTCCACTTAAATAATTATGTGGTCCTAGTGCACGAGCCCACATAGTCTTCCCCGTCCTAGAATCACCCTCAATGATGATACTAATAGGTCTTTCCGGCCGCGCAGCGGCACCCCTTCCGAAATACTCATCAGCCCATTGCTGCATCTCATCAGGAACGTGAGTAAAGGAAGATAATTCAAATATAGGGACCCATGGGGCTGGAGCCTTTGCAAATATTTTTTGGACATGTGATTGTATTTTGTCCAAATGAAGAACATAATCTCTAGGTTGTTCTTCTTTTAATATATTTAAGGCCTTGGATAGATTTTCTGCGTTTAGAACCTTCGCATAAGTGTCATTGGCAGTTTGGCAGCCTCCTCTTGCTGATCTTCCATCGATCTGGAAATTTCCAAAATCAATGAAGTCTCCGTCTTTTTCCATGTAGGTCTTGACGTCGGACGAGCTTTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGATCTTGTTGGGGATACCAAGTCGAAGAACCGTTGATTCTGGCATTTGAATTTGCCTTCGAATTGAATAAGCACATGGAGATGAGGTTCCCCATCTTCGTGAAATTCTCTGGTTACACGAATAAATTTCTTGTTTGTTGGTGTTTTAAGTGTCTGTAATTGGGAAAGTGTTTCCTCTTTGGTTAATGAACAATGAGGGTATGTAAGGAAGAAATTTTTTGCATTTACAGTGAAACGCTTTGGTGGTGGCATTGTAGTAAATAAGAAGATGAGACCCGATAGCTCTCCTTCAAACTTGGCGAAATGAATTGGGGAATGGGTCTCAATATATAGTAGAGTCCATTATAGAATATAATTGCCACGTGGCGGCCATCCGATATAATATT

Gene Information

NCBI Accession YP_009508029.1
Location 156-902
Protein Name V1
Coding Region ATGCCAAAGCGAGATGCCCCATGGCGTATAGTGGCAGGGACCACGAAAGTATCCCGCTCTTCTAATTATTCACCTCGGGGAGGTATACCCAAGCGGGATGCTTGGGTAAACAGGCCCATGTACAGGAAGCCCAGGATATATCGTACGTTGAGAGGGCCTGATGTTCCTAAAGGGTGTGAAGGCCCATGTAAAGTTCAATCCTATGAGCAACGTCATGACATTTCTCATCTTGGCAAGGTGATGTGTATCTCTGATGTGACACGTGGTAATGGTATTACACACCGTGTTGGTAAGCGTTTTTGCGTTAAGTCTGTGTACATATTGGGTAAGATATGGATGGACGAAAATATTAAACTGAAGAACCATACCAACAGTGTTATTTTTTGGTTAGTGAGGGATCGTAGACCCTATGGGACACCTATGGATTTTGGTCAGGTGTTTAACATGTTTGATAATGAGCCTAGTACTGCTACGGTGAAGAACGATCTTCGTGATCGTTATCAAGTCATTCATCGATTCAATGCTAAGGTTACGGGTGGACAGTATGCTAGCAACGAGCAAGCTCTTGTTCGGCGTTTCTGGAAGGTCAATAATCATGTAGTTTATAATCATCAGGAAGCCAGCGAAGTACGAGAATCCATACCGGAGAATGCTCTGTTATTGTATATGGCATGTACACATGCCTCTAATCCCGTGTATGCTACTTTGAAAATTCGGATCTATTTTTATGATTCGATTTCAAATTAA
Protein Sequence MPKRDAPWRIVAGTTKVSRSSNYSPRGGIPKRDAWVNRPMYRKPRIYRTLRGPDVPKGCEGPCKVQSYEQRHDISHLGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVIHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEASEVRESIPENALLLYMACTHASNPVYATLKIRIYFYDSISN

NCBI Accession YP_009508030.1
Location 899-1297
Protein Name C3
Coding Region ATGGATTCACGCACCGCGGAACCCATCACTGTGCCTCAAGCAGAGAATGGCGTCTTTATTTGGGAGATTACAAATCCCCTCTATTTCAAGATAACCAACGTCGAGGACCCCTATTATACAACGACCAGGATATACCATGTGCAGATACGTTTCAACCACAACCTGCGGAAAGCGTTGGGTCTCCACAAGGCATTTCTAAATTTCCAAGTCTGGACGACATCCCTGAGAGCTTCTGGGATGACATATTTAACTAGATTTAGATATTTCGTTTTATTGTATCTGAACCAATTAGGTATTATTTCCATTAACAATGTAATCAGAGCTGTTCGTTTCGCAACAGACAAATCTTATGTAAATTATGTACTCGAAAATCATTCAATAAAATTTAAACTTTATTAA
Protein Sequence MDSRTAEPITVPQAENGVFIWEITNPLYFKITNVEDPYYTTTRIYHVQIRFNHNLRKALGLHKAFLNFQVWTTSLRASGMTYLTRFRYFVLLYLNQLGIISINNVIRAVRFATDKSYVNYVLENHSIKFKLY

NCBI Accession YP_009508031.1
Location 1044-1433
Protein Name C2
Coding Region ATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAGCCACGGCACAGAGCCGCCAAACAGAAAACAACCAGGCGTAAACGCATAGACCTAAACTGCGGCTGCTCCATATACATCCACATCAACTGTAGAAATAATGGATTCACGCACCGCGGAACCCATCACTGTGCCTCAAGCAGAGAATGGCGTCTTTATTTGGGAGATTACAAATCCCCTCTATTTCAAGATAACCAACGTCGAGGACCCCTATTATACAACGACCAGGATATACCATGTGCAGATACGTTTCAACCACAACCTGCGGAAAGCGTTGGGTCTCCACAAGGCATTTCTAAATTTCCAAGTCTGGACGACATCCCTGAGAGCTTCTGGGATGACATATTTAACTAG
Protein Sequence MLNSSSSTPPSIKPRHRAAKQKTTRRKRIDLNCGCSIYIHINCRNNGFTHRGTHHCASSREWRLYLGDYKSPLFQDNQRRGPLLYNDQDIPCADTFQPQPAESVGSPQGISKFPSLDDIPESFWDDIFN

NCBI Accession YP_009508032.1
Location 1354-2430
Protein Name C1
Coding Region ATGCCACCACCAAAGCGTTTCACTGTAAATGCAAAAAATTTCTTCCTTACATACCCTCATTGTTCATTAACCAAAGAGGAAACACTTTCCCAATTACAGACACTTAAAACACCAACAAACAAGAAATTTATTCGTGTAACCAGAGAATTTCACGAAGATGGGGAACCTCATCTCCATGTGCTTATTCAATTCGAAGGCAAATTCAAATGCCAGAATCAACGGTTCTTCGACTTGGTATCCCCAACAAGATCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCGTCCGACGTCAAGACCTACATGGAAAAAGACGGAGACTTCATTGATTTTGGAAATTTCCAGATCGATGGAAGATCAGCAAGAGGAGGCTGCCAAACTGCCAATGACACTTATGCGAAGGTTCTAAACGCAGAAAATCTATCCAAGGCCTTAAATATATTAAAAGAAGAACAACCTAGAGATTATGTTCTTCATTTGGACAAAATACAATCACATGTCCAAAAAATATTTGCAAAGGCTCCAGCCCCATGGGTCCCTATATTTGAATTATCTTCCTTTACTCACGTTCCTGATGAGATGCAGCAATGGGCTGATGAGTATTTCGGAAGGGGTGCCGCTGCGCGGCCGGAAAGACCTATTAGTATCATCATTGAGGGTGATTCTAGGACGGGGAAGACTATGTGGGCTCGTGCACTAGGACCACATAATTATTTAAGTGGACACTTGGATTTTAATTCTAAAGTTTATTCAAATGAAGTGGAGTATAACGTCATTGATGATGTCACTCCGCATTATCTAAAAATGAAGCACTGGAAAGAACTAATTGGGTCCCAGCGTGACTGGCAAAGCAATTGCAAGTACGGAAAGCCGGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTTTGCAATCCAGGAGAGGGGGCTAGTTATAAAGACTTCCTTGACAAACATGAAAATGCATCTCTAAGAGCTTGGACACTGCATAATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAGCCACGGCACAGAGCCGCCAAACAGAAAACAACCAGGCGTAA
Protein Sequence MPPPKRFTVNAKNFFLTYPHCSLTKEETLSQLQTLKTPTNKKFIRVTREFHEDGEPHLHVLIQFEGKFKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYMEKDGDFIDFGNFQIDGRSARGGCQTANDTYAKVLNAENLSKALNILKEEQPRDYVLHLDKIQSHVQKIFAKAPAPWVPIFELSSFTHVPDEMQQWADEYFGRGAAARPERPISIIIEGDSRTGKTMWARALGPHNYLSGHLDFNSKVYSNEVEYNVIDDVTPHYLKMKHWKELIGSQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKHENASLRAWTLHNAKFIFLNSPLYQATAQSRQTENNQA

NCBI Accession YP_009508033.1
Location 2016-2273
Protein Name C4
Coding Region ATGGGGAACCTCATCTCCATGTGCTTATTCAATTCGAAGGCAAATTCAAATGCCAGAATCAACGGTTCTTCGACTTGGTATCCCCAACAAGATCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCGTCCGACGTCAAGACCTACATGGAAAAAGACGGAGACTTCATTGATTTTGGAAATTTCCAGATCGATGGAAGATCAGCAAGAGGAGGCTGCCAAACTGCCAATGACACTTATGCGAAGGTTCTAA
Protein Sequence MGNLISMCLFNSKANSNARINGSSTWYPQQDQHISIQTFRELKARPTSRPTWKKTETSLILEISRSMEDQQEEAAKLPMTLMRRF