Tomato enation leaf curl virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000969195.1
Isolate India: Narsipura, Karnataka
Release date 2015/4/6
Submitter Swarnalatha,P., Jalali,S., Krishna Reddy,M.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_026761
ACCGGATGGCCGCGCAAATTTTTAAAGTGGTCCCCTCCACACTTACATGTTGGCCAATGACCTTGTTCCCTCAGAGCTTATTTAAAACTAGTTGTCTTATTTATACTTGGTCACTAAGCATTGTAAATTCGCACTATGTGGGATCCACTAGTAAACGAGTTTCCTGAAACCGTACACGGTTTTAGATGTATGTTAGCAGTTAAATATCTTCAGTTAGTAGAAAAGACTTATTTTCCTGACACAGTCGGTTACGATTTAATCAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACTCCCGCTTCGAAGGTACGTCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGTTGCCCCCATTGTCCGCGTCACCAAAGCAAAAGCATGGGCGAACAGGCCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAGTCCAGACACGATGTAGTCCATATAGGCAAGGTCATGTGTATTAGTGATGTCACTCGTGGAACCGGGCTGACCCATAGAGTTGGTAAGCGTTTTTGTGTTAAGTCTGTTTACGTTTTGGGGAAGATATGGATGGATGAGAACATCAAGACCAAGAATCATACGAACAGTGTCATGTTTTTTCTTGTTCGTGACCGTCGTCCTGTTGACAAGCCACAAGACTTTGGAGAGGTGTTCAATATGTTTGACAACGAGCCTAGCACTGCTACTGTTAAGAATATGCACAGAGATCGTTATCAGGTGTTGAGGAAGTGGCATGCAACTGTCACCGGTGGACAGTACGCTTCAAAGGAACAGGCATTAGTGAAGAAGTTTGTTAGGGTTAATAATTATGTTGTTTATAACCAGCAAGAGGCTGGGAAATATGAGAATCATACTGAAAATGCATTGATGTTGTATATGGCGTGTACTCACGCCTCTAACCCTGTGTATGCTACTTTGAAGATACGGATCTATTTTTATGATTCAGTATCAAATTAATAAATATTGAATTTTATTGAATAAGATTGGTCTACATATACAATGTGTTCTAATACATCCCATAATACATGATCAACTGCACGAATTACATTATTAATACTGATAATTCCTAAATTATTTAAATATTTAAGCACTTGGGTCTTAAAGACCCTTAAGAATTGCCCAGTCGGAGGCTGTGAAGTCATCCAGATTCGGTAGGCTAGAAAACACTTGTGTATCTCCAACGCTTTCCTCAGGTTGTAATTGAACTGTATTTGGACGGTGATGATGTCCTCTTTCATAAGAAATGGCCGGTTGTTGTGTTCTGTTATCTTGAAATACAGGGGATTTTGAATCTCCCAGATAAACACGCCATTCTCTGCTTGAGAAGCTTTGATGAGTTCCGCTGTGCGTGAATCCATGGTTGTGGCAGGCTAATGCTATGAAGTATGAACACCCACAAGGGAGATCAACACGTCGACGCCTCGTCCCCTTCTTGGCTAGCCTGTGCTGCACTTTGATTGGAACCTGAGTAGAGTGGGCCTTCGAGGGTGACGAAGATCGCATTCTTTAAAGCCCAATTTTTGAGAGCATTATTCTTCTCTTCATCCAAGAACTCTTTATAACTTGAATTAGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTTCCGTACTTGGTATTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTAGTGAGGATCTACGTCATCGATGATGTTATACCACGCATCATTGCTGTAAACTTTGGGGCTTAGATCTAAATGACCACATAGGTAATTATGAGGCCCTAATGACCTAGCCCACATCGTTTTACCCGTACGACTGTCTCCCTCAATTACTATACTTTGAGGCCTCAGAGGCCGCGCAGCGGGATCGACAACGTTATCGATGGCCCAAACTTCAAGTTCTTCTGGAACTTGATCAAAAGAAGAACGAGAAAAAGGAGAAATATAAACATCCATTGGCTCCTGAAAGATTCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAAATCTTTAGGAGCTAGTTCCTTTATTACTCTAAGAGCCTCTGACTTACTGCCTGCGTTAAGTGCTGCGGCGTAAGCGTCGTTTGCTGTCTGTTGTCCTCCTCTTGCTGATCTTCCATCGATCTGAAACTCTCCCCATTCGAGAGTGTCCCCGTCCTTGTCGATGTAGGCCTTGACATCTGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTCTGATTCTTGCACTGGTATTTCCCCTCGAACTGGATGAGCACGTGCAGATGAGGTTCCCCATCTTCGTGAAGCTCTCTGCAGATCTTGATGTATTTTTTGGATGTTGGGGTTTCTAAGTTTTTTAATTGGGAAAGTGCTTCCTCTTTTGTTAGAGAGCACTTGGGATAAGTGAGAAAATAATTTTTGGCATTTATTCTAAATGGTCTTGTAGGAACCATGGTCAATTGGTCCGATCGGCTCCTCTAACAGCTTGTTCTATGAATTGGTGTACTGGAGTCCTATATATAGTGAGACACCAAATGGCAATATTGTAATTTCATAAAGAAATTCAAAATTCAAATTCGAATCCCGAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009129274.1
Location 136-492
Protein Name AV2
Coding Region ATGTGGGATCCACTAGTAAACGAGTTTCCTGAAACCGTACACGGTTTTAGATGTATGTTAGCAGTTAAATATCTTCAGTTAGTAGAAAAGACTTATTTTCCTGACACAGTCGGTTACGATTTAATCAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACTCCCGCTTCGAAGGTACGTCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGTTGCCCCCATTGTCCGCGTCACCAAAGCAAAAGCATGGGCGAACAGGCCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG
Protein Sequence MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYFPDTVGYDLIRDLISVIRARNYVEATSRYNHFHSRFEGTSPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQKAQDVQDVQKSRCP

NCBI Accession YP_009129275.1
Location 296-1066
Protein Name AV1
Coding Region ATGTCGAAGCGACCAGCAGATATAATCATTTCCACTCCCGCTTCGAAGGTACGTCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGTTGCCCCCATTGTCCGCGTCACCAAAGCAAAAGCATGGGCGAACAGGCCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAGTCCAGACACGATGTAGTCCATATAGGCAAGGTCATGTGTATTAGTGATGTCACTCGTGGAACCGGGCTGACCCATAGAGTTGGTAAGCGTTTTTGTGTTAAGTCTGTTTACGTTTTGGGGAAGATATGGATGGATGAGAACATCAAGACCAAGAATCATACGAACAGTGTCATGTTTTTTCTTGTTCGTGACCGTCGTCCTGTTGACAAGCCACAAGACTTTGGAGAGGTGTTCAATATGTTTGACAACGAGCCTAGCACTGCTACTGTTAAGAATATGCACAGAGATCGTTATCAGGTGTTGAGGAAGTGGCATGCAACTGTCACCGGTGGACAGTACGCTTCAAAGGAACAGGCATTAGTGAAGAAGTTTGTTAGGGTTAATAATTATGTTGTTTATAACCAGCAAGAGGCTGGGAAATATGAGAATCATACTGAAAATGCATTGATGTTGTATATGGCGTGTACTCACGCCTCTAACCCTGTGTATGCTACTTTGAAGATACGGATCTATTTTTATGATTCAGTATCAAATTAA
Protein Sequence MSKRPADIIISTPASKVRRRLNFDSPYVSRAVAPIVRVTKAKAWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession YP_009129276.1
Location 1063-1467
Protein Name AC3
Coding Region ATGGATTCACGCACAGCGGAACTCATCAAAGCTTCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACAGAACACAACAACCGGCCATTTCTTATGAAAGAGGACATCATCACCGTCCAAATACAGTTCAATTACAACCTGAGGAAAGCGTTGGAGATACACAAGTGTTTTCTAGCCTACCGAATCTGGATGACTTCACAGCCTCCGACTGGGCAATTCTTAAGGGTCTTTAAGACCCAAGTGCTTAAATATTTAAATAATTTAGGAATTATCAGTATTAATAATGTAATTCGTGCAGTTGATCATGTATTATGGGATGTATTAGAACACATTGTATATGTAGACCAATCTTATTCAATAAAATTCAATATTTATTAA
Protein Sequence MDSRTAELIKASQAENGVFIWEIQNPLYFKITEHNNRPFLMKEDIITVQIQFNYNLRKALEIHKCFLAYRIWMTSQPPTGQFLRVFKTQVLKYLNNLGIISINNVIRAVDHVLWDVLEHIVYVDQSYSIKFNIY

NCBI Accession YP_009129277.1
Location 1208-1612
Protein Name AC2
Coding Region ATGCGATCTTCGTCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTAGCCAAGAAGGGGACGAGGCGTCGACGTGTTGATCTCCCTTGTGGGTGTTCATACTTCATAGCATTAGCCTGCCACAACCATGGATTCACGCACAGCGGAACTCATCAAAGCTTCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACAGAACACAACAACCGGCCATTTCTTATGAAAGAGGACATCATCACCGTCCAAATACAGTTCAATTACAACCTGAGGAAAGCGTTGGAGATACACAAGTGTTTTCTAGCCTACCGAATCTGGATGACTTCACAGCCTCCGACTGGGCAATTCTTAAGGGTCTTTAA
Protein Sequence MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALACHNHGFTHSGTHQSFSSREWRVYLGDSKSPVFQDNRTQQPAISYERGHHHRPNTVQLQPEESVGDTQVFSSLPNLDDFTASDWAILKGL

NCBI Accession YP_009129278.1
Location 1515-2600
Protein Name AC1
Coding Region ATGGTTCCTACAAGACCATTTAGAATAAATGCCAAAAATTATTTTCTCACTTATCCCAAGTGCTCTCTAACAAAAGAGGAAGCACTTTCCCAATTAAAAAACTTAGAAACCCCAACATCCAAAAAATACATCAAGATCTGCAGAGAGCTTCACGAAGATGGGGAACCTCATCTGCACGTGCTCATCCAGTTCGAGGGGAAATACCAGTGCAAGAATCAGAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCAGATGTCAAGGCCTACATCGACAAGGACGGGGACACTCTCGAATGGGGAGAGTTTCAGATCGATGGAAGATCAGCAAGAGGAGGACAACAGACAGCAAACGACGCTTACGCCGCAGCACTTAACGCAGGCAGTAAGTCAGAGGCTCTTAGAGTAATAAAGGAACTAGCTCCTAAAGATTTTGTACTACAATTTCATAATTTAAATGCAAATCTAGACAGAATCTTTCAGGAGCCAATGGATGTTTATATTTCTCCTTTTTCTCGTTCTTCTTTTGATCAAGTTCCAGAAGAACTTGAAGTTTGGGCCATCGATAACGTTGTCGATCCCGCTGCGCGGCCTCTGAGGCCTCAAAGTATAGTAATTGAGGGAGACAGTCGTACGGGTAAAACGATGTGGGCTAGGTCATTAGGGCCTCATAATTACCTATGTGGTCATTTAGATCTAAGCCCCAAAGTTTACAGCAATGATGCGTGGTATAACATCATCGATGACGTAGATCCTCACTACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAGGGACTGGCAATCAAATACCAAGTACGGAAAGCCAGTTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCTAATTCAAGTTATAAAGAGTTCTTGGATGAAGAGAAGAATAATGCTCTCAAAAATTGGGCTTTAAAGAATGCGATCTTCGTCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTAGCCAAGAAGGGGACGAGGCGTCGACGTGTTGA
Protein Sequence MVPTRPFRINAKNYFLTYPKCSLTKEEALSQLKNLETPTSKKYIKICRELHEDGEPHLHVLIQFEGKYQCKNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHNLNANLDRIFQEPMDVYISPFSRSSFDQVPEELEVWAIDNVVDPAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNIIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALKNWALKNAIFVTLEGPLYSGSNQSAAQASQEGDEASTC

NCBI Accession YP_009129279.1
Location 2153-2443
Protein Name AC4
Coding Region ATGGGGAACCTCATCTGCACGTGCTCATCCAGTTCGAGGGGAAATACCAGTGCAAGAATCAGAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCAGATGTCAAGGCCTACATCGACAAGGACGGGGACACTCTCGAATGGGGAGAGTTTCAGATCGATGGAAGATCAGCAAGAGGAGGACAACAGACAGCAAACGACGCTTACGCCGCAGCACTTAACGCAGGCAGTAAGTCAGAGGCTCTTAGAGTAA
Protein Sequence MGNLICTCSSSSRGNTSARIRDSSTWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTLSNGESFRSMEDQQEEDNRQQTTLTPQHLTQAVSQRLLE