Tobacco leaf curl Yunnan virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000860165.1
Isolate China:Yunnan
Release date 2015/2/13
Submitter Zhou,X.P., Xie,Y., Zhang,Z.K., Zhou,X.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_004356
ACCTGTGGGCCGCGATTTTTTTTAAAGTGGGCCCGTTGATGTGATATGTCATCCAATCAGAACGCTCCCCCAAAGCTTAATTGTTTTGTGGTCCCTTATTTAAACTTGCTCACCAAGTAGTGCACTCCGCACTATGTGGGATCCATTATTAAACGAGTTTCCCGAAACCGTTCACGGCTTTAGGTGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATTCGCCTGATACATTAGGGCACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGCACGCCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGATCATGGACGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTTCAATCTTTTGATGCTAAGAACGATATTGGTCACATGGGCAAGGTCTTATGTTTGTCCGACGTTACCCGTGGTATTGGGCTTACCCATCGAGTTGGCAAGCGTTTCTGTGTCAAATCACTTTATTTTGTTGGCAAGATCTGGATGGATGAAAATATTAAGGTTAAGAACCACACTAACACCGTTTTATTCTGGATAGTTAGAGATCGGCGTCCTACTGGAACGCCTAATGATTTTCAGCAGGTCTTTAATGTATATGATAATGAACCTAGCACTGCTACTGTGAAGAACGATCAGCGTGATCGTTTTCAGGTTATAAGGAGGTTCCAGGCAACGGTGACTGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTTTACAATCATCAGGAAGCTGGCAAGTATGAGAACCATACCGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTCAGGAGTTATTTTTATGACTCAGTGACGAATTAATAAAGATTGAATTTTATTATATTAGAATTTGTTACATATTCTGTTTTTTCCAATACATCCCATAATACATGATTACATGCTCTAATTACATTGTTAATACTAATTACACCCAAATTATCTAAATATTTCATACATTGAACCTTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCCAGATCTGGAAGCTCAGAAAACACTGGTGTATTCCCAACGCTTTCCTCAGGTTGTGGTTGAACTGTATTTGGATCTGTATGATGTCGTGTTTGGTGTTGAATGGTCTCTCGTGGTGCTTGGTTATCTTGAAATAGAGGGGATTTCTGATCGTCCAGGTATACACGCCACTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGAAAATCCATGATTTGCACAATTTATGCCGAAGTAGTATGAGCACCCACACGTTAGATCAACTCTCCGCCTGCGAACTGGCCTCCTCTTGGCTATTCTGTGTTGCACTTTGATTGGTACCTGAGTACAATGGGCTGTTGAGGGTGATGAATTCCGCATTCTTTAATGCCCACTCTTTTAAAGCTGAATTCTTTTCTTCCTCCAAGAATTCTTTATATGATGATGTTGGGCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTTAATTTGAATTGGTTTCCCGTACTTGGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGACGTTATACCAAGCATCATTACTGTACACCTTTGGACTCAGATCCAGATGACCGCACAGATAATTATGTGGGCCCAATGAACGCGCCCACATGGTTTTTCCTGTACGACTCTCTCCCTCTATGACAATACTGATGGGTCTCCATGGCCGCGCACCGGCATGCCTTACATTATCAGCAGCCCCATTCTTCAAGTTCTTTGGGAACTTGATCCAAATGATGAAAGATAAAAAAGGAGAACCAAAAACCTCTAAAGGAGGTGCAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAAAACAAAATCTTTAGGAGCTAACTCCTTAATTACATTAAGAGCCTCTGACTTACTGCCGCTGTTAAGTGCCTGGGCGTAAGCGTCATTGGCTGTCTGTTGACCCCCTCTTGCAGATCTTCCGTCGATCTGAAACTCTCCCCATTCGAGGGTGTCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAAGTCGAAGAATCTGTTATTCGTGCAGACGTATTTCCCTTCGAACTGGATAAGCACGTGGAGATGAGGGCTCCCATCTTCGTGAAGCTCTCTGCAGATTTTGATATATTTTTTATTAGTTGGTGTCTCTAGGGCTTGTAATTGGGAAAGTGCTTCTTCTTTGTTGAGAGAGCACTGTGGATAAGTGAGGAAATAATTTTTGGCTTGTATTTTAAAACGTTTGGGAGGAGCCATTGACTTGGTCAATTGGAGACATTCATAGTTCTCTGTCAATTGGAGACAGGAGACAATATATAGGTGTCTCCAAATGGCATAGTGGTAATTTCTCATAGAAATTCCACTTTAATTTGAAATCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession NP_722552.1
Location 134-490
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCATTATTAAACGAGTTTCCCGAAACCGTTCACGGCTTTAGGTGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATTCGCCTGATACATTAGGGCACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGCACGCCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGATCATGGACGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG
Protein Sequence MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDLISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKIMDEQAHEQKAQDVQDVQKSRCP

NCBI Accession NP_722553.1
Location 294-1064
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGCACGCCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGATCATGGACGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTTCAATCTTTTGATGCTAAGAACGATATTGGTCACATGGGCAAGGTCTTATGTTTGTCCGACGTTACCCGTGGTATTGGGCTTACCCATCGAGTTGGCAAGCGTTTCTGTGTCAAATCACTTTATTTTGTTGGCAAGATCTGGATGGATGAAAATATTAAGGTTAAGAACCACACTAACACCGTTTTATTCTGGATAGTTAGAGATCGGCGTCCTACTGGAACGCCTAATGATTTTCAGCAGGTCTTTAATGTATATGATAATGAACCTAGCACTGCTACTGTGAAGAACGATCAGCGTGATCGTTTTCAGGTTATAAGGAGGTTCCAGGCAACGGTGACTGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTTTACAATCATCAGGAAGCTGGCAAGTATGAGAACCATACCGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTCAGGAGTTATTTTTATGACTCAGTGACGAATTAA
Protein Sequence MSKRPADIIISTPASKARRRLNFDSPYVSRAAAPIVRVTKARSWTNRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVLCLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPNDFQQVFNVYDNEPSTATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession NP_722554.1
Location 1061-1465
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAGAAATCCCCTCTATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAAACACGACATCATACAGATCCAAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGAGCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAAGGTTCAATGTATGAAATATTTAGATAATTTGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAAAAAACAGAATATGTAACAAATTCTAATATAATAAAATTCAATCTTTATTAA
Protein Sequence MDFRTGELLTATQCESGVYTWTIRNPLYFKITKHHERPFNTKHDIIQIQIQFNHNLRKALGIHQCFLSFQIWTRLQPQTWRFLRVFKVQCMKYLDNLGVISINNVIRACNHVLWDVLEKTEYVTNSNIIKFNLY

NCBI Accession NP_722555.1
Location 1206-1613
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCAGTTCGCAGGCGGAGAGTTGATCTAACGTGTGGGTGCTCATACTACTTCGGCATAAATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAGAAATCCCCTCTATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAAACACGACATCATACAGATCCAAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGAGCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAA
Protein Sequence MRNSSPSTAHCTQVPIKVQHRIAKRRPVRRRRVDLTCGCSYYFGINCANHGFSHRGITHCNSMREWRVYLDDQKSPLFQDNQAPRETIQHQTRHHTDPNTVQPQPEESVGNTPVFSELPDLDSLTTSDLAFLKSI

NCBI Accession NP_722556.1
Location 1513-2604
Gene Name AC1
Protein Name Rep protein
Coding Region ATGGCTCCTCCCAAACGTTTTAAAATACAAGCCAAAAATTATTTCCTCACTTATCCACAGTGCTCTCTCAACAAAGAAGAAGCACTTTCCCAATTACAAGCCCTAGAGACACCAACTAATAAAAAATATATCAAAATCTGCAGAGAGCTTCACGAAGATGGGAGCCCTCATCTCCACGTGCTTATCCAGTTCGAAGGGAAATACGTCTGCACGAATAACAGATTCTTCGACTTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGAAGATCTGCAAGAGGGGGTCAACAGACAGCCAATGACGCTTACGCCCAGGCACTTAACAGCGGCAGTAAGTCAGAGGCTCTTAATGTAATTAAGGAGTTAGCTCCTAAAGATTTTGTTTTACAATTTCATAATTTAAATGCTAATTTAGATAGGATTTTTGCACCTCCTTTAGAGGTTTTTGGTTCTCCTTTTTTATCTTTCATCATTTGGATCAAGTTCCCAAAGAACTTGAAGAATGGGGCTGCTGATAATGTAAGGCATGCCGGTGCGCGGCCATGGAGACCCATCAGTATTGTCATAGAGGGAGAGAGTCGTACAGGAAAAACCATGTGGGCGCGTTCATTGGGCCCACATAATTATCTGTGCGGTCATCTGGATCTGAGTCCAAAGGTGTACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACCAAGTACGGGAAACCAATTCAAATTAAAGGTGGAATCCCAACTATCTTCCTTTGCAATCCAGGCCCAACATCATCATATAAAGAATTCTTGGAGGAAGAAAAGAATTCAGCTTTAAAAGAGTGGGCATTAAAGAATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCAGTTCGCAGGCGGAGAGTTGA
Protein Sequence MAPPKRFKIQAKNYFLTYPQCSLNKEEALSQLQALETPTNKKYIKICRELHEDGSPHLHVLIQFEGKYVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSEALNVIKELAPKDFVLQFHNLNANLDRIFAPPLEVFGSPFLSFIIWIKFPKNLKNGAADNVRHAGARPWRPISIVIEGESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLEEEKNSALKEWALKNAEFITLNSPLYSGTNQSATQNSQEEASSQAES

NCBI Accession NP_722557.1
Location 2157-2447
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAGCCCTCATCTCCACGTGCTTATCCAGTTCGAAGGGAAATACGTCTGCACGAATAACAGATTCTTCGACTTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGAAGATCTGCAAGAGGGGGTCAACAGACAGCCAATGACGCTTACGCCCAGGCACTTAACAGCGGCAGTAAGTCAGAGGCTCTTAATGTAA
Protein Sequence MGALISTCLSSSKGNTSARITDSSTWYPQPGQHISIRTFRELNPAPTSSPTSTRTETPSNGESFRSTEDLQEGVNRQPMTLTPRHLTAAVSQRLLM