Tobacco leaf curl Yunnan virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000860165.1 |
Isolate |
China:Yunnan |
Release date |
2015/2/13 |
Submitter |
Zhou,X.P., Xie,Y., Zhang,Z.K., Zhou,X. |
Host |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCTGTGGGCCGCGATTTTTTTTAAAGTGGGCCCGTTGATGTGATATGTCATCCAATCAGAACGCTCCCCCAAAGCTTAATTGTTTTGTGGTCCCTTATTTAAACTTGCTCACCAAGTAGTGCACTCCGCACTATGTGGGATCCATTATTAAACGAGTTTCCCGAAACCGTTCACGGCTTTAGGTGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATTCGCCTGATACATTAGGGCACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGCACGCCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGATCATGGACGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTTCAATCTTTTGATGCTAAGAACGATATTGGTCACATGGGCAAGGTCTTATGTTTGTCCGACGTTACCCGTGGTATTGGGCTTACCCATCGAGTTGGCAAGCGTTTCTGTGTCAAATCACTTTATTTTGTTGGCAAGATCTGGATGGATGAAAATATTAAGGTTAAGAACCACACTAACACCGTTTTATTCTGGATAGTTAGAGATCGGCGTCCTACTGGAACGCCTAATGATTTTCAGCAGGTCTTTAATGTATATGATAATGAACCTAGCACTGCTACTGTGAAGAACGATCAGCGTGATCGTTTTCAGGTTATAAGGAGGTTCCAGGCAACGGTGACTGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTTTACAATCATCAGGAAGCTGGCAAGTATGAGAACCATACCGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTCAGGAGTTATTTTTATGACTCAGTGACGAATTAATAAAGATTGAATTTTATTATATTAGAATTTGTTACATATTCTGTTTTTTCCAATACATCCCATAATACATGATTACATGCTCTAATTACATTGTTAATACTAATTACACCCAAATTATCTAAATATTTCATACATTGAACCTTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCCAGATCTGGAAGCTCAGAAAACACTGGTGTATTCCCAACGCTTTCCTCAGGTTGTGGTTGAACTGTATTTGGATCTGTATGATGTCGTGTTTGGTGTTGAATGGTCTCTCGTGGTGCTTGGTTATCTTGAAATAGAGGGGATTTCTGATCGTCCAGGTATACACGCCACTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGAAAATCCATGATTTGCACAATTTATGCCGAAGTAGTATGAGCACCCACACGTTAGATCAACTCTCCGCCTGCGAACTGGCCTCCTCTTGGCTATTCTGTGTTGCACTTTGATTGGTACCTGAGTACAATGGGCTGTTGAGGGTGATGAATTCCGCATTCTTTAATGCCCACTCTTTTAAAGCTGAATTCTTTTCTTCCTCCAAGAATTCTTTATATGATGATGTTGGGCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTTAATTTGAATTGGTTTCCCGTACTTGGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGACGTTATACCAAGCATCATTACTGTACACCTTTGGACTCAGATCCAGATGACCGCACAGATAATTATGTGGGCCCAATGAACGCGCCCACATGGTTTTTCCTGTACGACTCTCTCCCTCTATGACAATACTGATGGGTCTCCATGGCCGCGCACCGGCATGCCTTACATTATCAGCAGCCCCATTCTTCAAGTTCTTTGGGAACTTGATCCAAATGATGAAAGATAAAAAAGGAGAACCAAAAACCTCTAAAGGAGGTGCAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAAAACAAAATCTTTAGGAGCTAACTCCTTAATTACATTAAGAGCCTCTGACTTACTGCCGCTGTTAAGTGCCTGGGCGTAAGCGTCATTGGCTGTCTGTTGACCCCCTCTTGCAGATCTTCCGTCGATCTGAAACTCTCCCCATTCGAGGGTGTCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAAGTCGAAGAATCTGTTATTCGTGCAGACGTATTTCCCTTCGAACTGGATAAGCACGTGGAGATGAGGGCTCCCATCTTCGTGAAGCTCTCTGCAGATTTTGATATATTTTTTATTAGTTGGTGTCTCTAGGGCTTGTAATTGGGAAAGTGCTTCTTCTTTGTTGAGAGAGCACTGTGGATAAGTGAGGAAATAATTTTTGGCTTGTATTTTAAAACGTTTGGGAGGAGCCATTGACTTGGTCAATTGGAGACATTCATAGTTCTCTGTCAATTGGAGACAGGAGACAATATATAGGTGTCTCCAAATGGCATAGTGGTAATTTCTCATAGAAATTCCACTTTAATTTGAAATCCAAAAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
NP_722552.1
|
Location
|
134-490 |
Gene Name
|
AV2 |
Protein Name
|
AV2 protein |
Coding Region
|
ATGTGGGATCCATTATTAAACGAGTTTCCCGAAACCGTTCACGGCTTTAGGTGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATTCGCCTGATACATTAGGGCACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGCACGCCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGATCATGGACGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG |
Protein Sequence
|
MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDLISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKIMDEQAHEQKAQDVQDVQKSRCP |
NCBI Accession
|
NP_722553.1
|
Location
|
294-1064 |
Gene Name
|
AV1 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGCACGCCGCCGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGATCATGGACGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTTCAATCTTTTGATGCTAAGAACGATATTGGTCACATGGGCAAGGTCTTATGTTTGTCCGACGTTACCCGTGGTATTGGGCTTACCCATCGAGTTGGCAAGCGTTTCTGTGTCAAATCACTTTATTTTGTTGGCAAGATCTGGATGGATGAAAATATTAAGGTTAAGAACCACACTAACACCGTTTTATTCTGGATAGTTAGAGATCGGCGTCCTACTGGAACGCCTAATGATTTTCAGCAGGTCTTTAATGTATATGATAATGAACCTAGCACTGCTACTGTGAAGAACGATCAGCGTGATCGTTTTCAGGTTATAAGGAGGTTCCAGGCAACGGTGACTGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTTTACAATCATCAGGAAGCTGGCAAGTATGAGAACCATACCGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTCAGGAGTTATTTTTATGACTCAGTGACGAATTAA |
Protein Sequence
|
MSKRPADIIISTPASKARRRLNFDSPYVSRAAAPIVRVTKARSWTNRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVLCLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPNDFQQVFNVYDNEPSTATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN |
NCBI Accession
|
NP_722554.1
|
Location
|
1061-1465 |
Gene Name
|
AC3 |
Protein Name
|
AC3 protein |
Coding Region
|
ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAGAAATCCCCTCTATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAAACACGACATCATACAGATCCAAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGAGCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAAGGTTCAATGTATGAAATATTTAGATAATTTGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAAAAAACAGAATATGTAACAAATTCTAATATAATAAAATTCAATCTTTATTAA |
Protein Sequence
|
MDFRTGELLTATQCESGVYTWTIRNPLYFKITKHHERPFNTKHDIIQIQIQFNHNLRKALGIHQCFLSFQIWTRLQPQTWRFLRVFKVQCMKYLDNLGVISINNVIRACNHVLWDVLEKTEYVTNSNIIKFNLY |
NCBI Accession
|
NP_722555.1
|
Location
|
1206-1613 |
Gene Name
|
AC2 |
Protein Name
|
AC2 protein |
Coding Region
|
ATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCAGTTCGCAGGCGGAGAGTTGATCTAACGTGTGGGTGCTCATACTACTTCGGCATAAATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAGAAATCCCCTCTATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAAACACGACATCATACAGATCCAAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTGAGCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAA |
Protein Sequence
|
MRNSSPSTAHCTQVPIKVQHRIAKRRPVRRRRVDLTCGCSYYFGINCANHGFSHRGITHCNSMREWRVYLDDQKSPLFQDNQAPRETIQHQTRHHTDPNTVQPQPEESVGNTPVFSELPDLDSLTTSDLAFLKSI |
NCBI Accession
|
NP_722556.1
|
Location
|
1513-2604 |
Gene Name
|
AC1 |
Protein Name
|
Rep protein |
Coding Region
|
ATGGCTCCTCCCAAACGTTTTAAAATACAAGCCAAAAATTATTTCCTCACTTATCCACAGTGCTCTCTCAACAAAGAAGAAGCACTTTCCCAATTACAAGCCCTAGAGACACCAACTAATAAAAAATATATCAAAATCTGCAGAGAGCTTCACGAAGATGGGAGCCCTCATCTCCACGTGCTTATCCAGTTCGAAGGGAAATACGTCTGCACGAATAACAGATTCTTCGACTTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGAAGATCTGCAAGAGGGGGTCAACAGACAGCCAATGACGCTTACGCCCAGGCACTTAACAGCGGCAGTAAGTCAGAGGCTCTTAATGTAATTAAGGAGTTAGCTCCTAAAGATTTTGTTTTACAATTTCATAATTTAAATGCTAATTTAGATAGGATTTTTGCACCTCCTTTAGAGGTTTTTGGTTCTCCTTTTTTATCTTTCATCATTTGGATCAAGTTCCCAAAGAACTTGAAGAATGGGGCTGCTGATAATGTAAGGCATGCCGGTGCGCGGCCATGGAGACCCATCAGTATTGTCATAGAGGGAGAGAGTCGTACAGGAAAAACCATGTGGGCGCGTTCATTGGGCCCACATAATTATCTGTGCGGTCATCTGGATCTGAGTCCAAAGGTGTACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACCAAGTACGGGAAACCAATTCAAATTAAAGGTGGAATCCCAACTATCTTCCTTTGCAATCCAGGCCCAACATCATCATATAAAGAATTCTTGGAGGAAGAAAAGAATTCAGCTTTAAAAGAGTGGGCATTAAAGAATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCAGTTCGCAGGCGGAGAGTTGA |
Protein Sequence
|
MAPPKRFKIQAKNYFLTYPQCSLNKEEALSQLQALETPTNKKYIKICRELHEDGSPHLHVLIQFEGKYVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSEALNVIKELAPKDFVLQFHNLNANLDRIFAPPLEVFGSPFLSFIIWIKFPKNLKNGAADNVRHAGARPWRPISIVIEGESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLEEEKNSALKEWALKNAEFITLNSPLYSGTNQSATQNSQEEASSQAES |
NCBI Accession
|
NP_722557.1
|
Location
|
2157-2447 |
Gene Name
|
AC4 |
Protein Name
|
AC4 protein |
Coding Region
|
ATGGGAGCCCTCATCTCCACGTGCTTATCCAGTTCGAAGGGAAATACGTCTGCACGAATAACAGATTCTTCGACTTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGAAGATCTGCAAGAGGGGGTCAACAGACAGCCAATGACGCTTACGCCCAGGCACTTAACAGCGGCAGTAAGTCAGAGGCTCTTAATGTAA |
Protein Sequence
|
MGALISTCLSSSKGNTSARITDSSTWYPQPGQHISIRTFRELNPAPTSSPTSTRTETPSNGESFRSTEDLQEGVNRQPMTLTPRHLTAAVSQRLLM |