Tobacco leaf curl Thailand virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000871705.1
Isolate Thailand
Release date 2015/2/13
Submitter Knierim,D., Maiss,E.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_009553
TAATATTACCGGATGGCCGCGATTTTTTTAAAGTGGGCCCCCTGATGTGATATGTCCCCCAATAAAAACGCTCCCTCAAAGCCTATTTAATTCAAATCCATTATAAATACTTGGTCCCTACGTTTTTCAATTAAAGACATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGATTTAGGTGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACCTATTCGCCTGACACATTAGGGCACGATTTAATTAGGGATTTAATTTCTGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCACTGTCCGCGTCACAAAAGCAAGATCATGGACGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTTCAATCGTTTGATGCTAAGAACGATATTGGTCACATGGGCAAGGTCTTATGTTTGTCCGACGTTACCCGTGGTATTGGGCTTACCCATCGAGTTGGCAAGCGTTTCTGTGTCAAATCACTTTATTTTGTTGGCAAGATCTGGATGGATGAAAATATTAAGGTTAAGAACCACACTAACACCGTTTTATTCTGGATAGTTAGAGATCGGCGTCCTACTGGAACGCCTAATGATTTTCAGCAGGTCTTTAATGTATATGATAATGAACCCAGCACTGCTACTGTGAAGAACGACCAGCGTGATCGTTACCAGGTTTTAAGGAGGTTCCAGGCAACGGTGACTGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTTTACAATCACCAGGAAGCTGGGAAGTACGAGAACCATACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTCAGAAGTTATTTCTATGACTCAGTGACGAATTAATAAAGATTGAATTTTATTATATTAGACTGTCTTACATATTCTGTCTTTTCCAATACATCCCATAATACATGATCACATGCTCTAATTACATTGTTAATACTAATTACACCCAAATTATCTAAATATTTCATACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCCAGATCTGGAAGATTAGAAAACACTGGTGTATTCCCAACGCTTTCCTCAGGTTGTGGTTGAACTGTATTTGGATCTGTATGATGTCCTGATTGGTGTTGAATGGTCTCTCGTGGTGCTTGGTTATCTTGAAATAGAGGGGATTTCTGATCGTCCAAGTATACACGCCACTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGTGAATCCATGATTTGCGCAGTCTATGCCTAAGTAATATGAGCACCCGCACGTTAGATCAACTCTCCTCCTGCGAACTGGTTTCTTCTTGGCTATTCTGTGTTGCACTTTGATTGGAACCTGAGTACAATGGGCTGTTGAGGGTGATGAATTCCGCATTCTTTAATGCCCAATATTTTAATGCTGAGTTTTTCTCTTCATCCAAGAATTCTTTATAGCTAGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTTCCGTATTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCGACGTCATCGATGACGTTATACCAGGCATCATTATTGTATACCTTTGGACTGAGATCAAGGTGACCACAGAGATAATTATGTGGGCCTAATGATCTTGCCCACATCGTCTTTCCTGTTCTACTATCACCTTCAATTACTATACTCATGGGTCTCAATGGCCGCGCAGCGGCACTGACGACATTCTCGGCAGCCCATTCCTCAAGTTCCTCTGGAACTTGATCGAAAGAAGAAGATAAAAAAGGAGAAATATATTCCTCTATTGGAGGAGTAAAAATCCTATCTAAATTAGAATTTAAATTATGAAACTGTAAAACAAAATCTTTAGGAGCCTTCTCCTTTAATATATTGAGGGCCGCTGCTTTGGACCCTGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCTTCCATCGATCTGGAAAACTCCATGATCAAGCACGTCTCCGTCTTTTTCCATGTATGCTTTAACATCTGTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGCTTGGGGATGTGAGATCGAAGAATCTGTTGTTTTGGCATTTGAATTTGCCTTCGAACTGGATGAGGACATGCAGGTGAGGAGACCCATCTTCGTGTAGTTCCCTGCAAATACGTATGAATAATTTATTAGTCGGTGTTGATAGGGCTGAGATTTGGGAAAGTGCCTCTTCTTTAGTAAGGGAGCACTGTGGATAAGTGAGGAAATAATTCTTGGCATTTATAAAAAATTTTTTTGGTTGAGGCATATTGACTGGTCAATCGGGTCCTCTCAAACTTGGCTATGCAATCGGGGAATGGGTCCTTATTTATAGTTGAGGACCTAAATGGCAAAGTCGTAAATTCCAAAAGAAATTCAAAATTTGAATTTTGAATCCAAAAGCGGCCATCCGAT

Gene Information

NCBI Accession YP_001285869.1
Location 139-495
Protein Name V2
Coding Region ATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGATTTAGGTGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACCTATTCGCCTGACACATTAGGGCACGATTTAATTAGGGATTTAATTTCTGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCACTGTCCGCGTCACAAAAGCAAGATCATGGACGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG
Protein Sequence MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDLISVIRARNYVEATSRYNHFHARLEGTSPSELRQPICEPCCCPHCPRHKSKIMDEQAHEQKAQDVQDVQKSRCP

NCBI Accession YP_001285870.1
Location 299-1069
Protein Name V1
Coding Region ATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCACTGTCCGCGTCACAAAAGCAAGATCATGGACGAACAGGCCCATGAACAGAAAGCCCAAGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTTCAATCGTTTGATGCTAAGAACGATATTGGTCACATGGGCAAGGTCTTATGTTTGTCCGACGTTACCCGTGGTATTGGGCTTACCCATCGAGTTGGCAAGCGTTTCTGTGTCAAATCACTTTATTTTGTTGGCAAGATCTGGATGGATGAAAATATTAAGGTTAAGAACCACACTAACACCGTTTTATTCTGGATAGTTAGAGATCGGCGTCCTACTGGAACGCCTAATGATTTTCAGCAGGTCTTTAATGTATATGATAATGAACCCAGCACTGCTACTGTGAAGAACGACCAGCGTGATCGTTACCAGGTTTTAAGGAGGTTCCAGGCAACGGTGACTGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTTTACAATCACCAGGAAGCTGGGAAGTACGAGAACCATACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTCAGAAGTTATTTCTATGACTCAGTGACGAATTAA
Protein Sequence MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPTVRVTKARSWTNRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVLCLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPNDFQQVFNVYDNEPSTATVKNDQRDRYQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession YP_001285871.1
Location 833-1003
Protein Name C5
Coding Region ATGAGTACATGCCATATACAACAACAAAGCATTTTCAGTATGGTTCTCGTACTTCCCAGCTTCCTGGTGATTGTAAACTACATAATTATTAACACGATAAAACTTTCTAATAATCGCCTGCTCCTTCGCTGCATATTGTCCACCAGTCACCGTTGCCTGGAACCTCCTTAA
Protein Sequence MSTCHIQQQSIFSMVLVLPSFLVIVNYIIINTIKLSNNRLLLRCILSTSHRCLEPP

NCBI Accession YP_001285872.1
Location 1066-1470
Protein Name C3
Coding Region ATGGATTCACGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACTTGGACGATCAGAAATCCCCTCTATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAATCAGGACATCATACAGATCCAAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTAATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATATTTAGATAATTTGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTGATCATGTATTATGGGATGTATTGGAAAAGACAGAATATGTAAGACAGTCTAATATAATAAAATTCAATCTTTATTAA
Protein Sequence MDSRTGELLTATQCESGVYTWTIRNPLYFKITKHHERPFNTNQDIIQIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLGVISINNVIRACDHVLWDVLEKTEYVRQSNIIKFNLY

NCBI Accession YP_001285873.1
Location 1211-1618
Protein Name C2
Coding Region ATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTTCCAATCAAAGTGCAACACAGAATAGCCAAGAAGAAACCAGTTCGCAGGAGGAGAGTTGATCTAACGTGCGGGTGCTCATATTACTTAGGCATAGACTGCGCAAATCATGGATTCACGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACTTGGACGATCAGAAATCCCCTCTATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAATCAGGACATCATACAGATCCAAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTAATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAG
Protein Sequence MRNSSPSTAHCTQVPIKVQHRIAKKKPVRRRRVDLTCGCSYYLGIDCANHGFTHRGITHCNSMREWRVYLDDQKSPLFQDNQAPRETIQHQSGHHTDPNTVQPQPEESVGNTPVFSNLPDLDSLTTSDLAFLKSI

NCBI Accession YP_001285874.1
Location 1518-2606
Protein Name C1
Coding Region ATGCCTCAACCAAAAAAATTTTTTATAAATGCCAAGAATTATTTCCTCACTTATCCACAGTGCTCCCTTACTAAAGAAGAGGCACTTTCCCAAATCTCAGCCCTATCAACACCGACTAATAAATTATTCATACGTATTTGCAGGGAACTACACGAAGATGGGTCTCCTCACCTGCATGTCCTCATCCAGTTCGAAGGCAAATTCAAATGCCAAAACAACAGATTCTTCGATCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAGATCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGCGGCCCTCAATATATTAAAGGAGAAGGCTCCTAAAGATTTTGTTTTACAGTTTCATAATTTAAATTCTAATTTAGATAGGATTTTTACTCCTCCAATAGAGGAATATATTTCTCCTTTTTTATCTTCTTCTTTCGATCAAGTTCCAGAGGAACTTGAGGAATGGGCTGCCGAGAATGTCGTCAGTGCCGCTGCGCGGCCATTGAGACCCATGAGTATAGTAATTGAAGGTGATAGTAGAACAGGAAAGACGATGTGGGCAAGATCATTAGGCCCACATAATTATCTCTGTGGTCACCTTGATCTCAGTCCAAAGGTATACAATAATGATGCCTGGTATAACGTCATCGATGACGTCGACCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAATACGGAAAGCCAGTTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCCAACTCTAGCTATAAAGAATTCTTGGATGAAGAGAAAAACTCAGCATTAAAATATTGGGCATTAAAGAATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTTCCAATCAAAGTGCAACACAGAATAGCCAAGAAGAAACCAGTTCGCAGGAGGAGAGTTGA
Protein Sequence MPQPKKFFINAKNYFLTYPQCSLTKEEALSQISALSTPTNKLFIRICRELHEDGSPHLHVLIQFEGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKSSTDVKAYMEKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKAAALNILKEKAPKDFVLQFHNLNSNLDRIFTPPIEEYISPFLSSSFDQVPEELEEWAAENVVSAAARPLRPMSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKYWALKNAEFITLNSPLYSGSNQSATQNSQEETSSQEES

NCBI Accession YP_001285875.1
Location 2156-2449
Protein Name C4
Coding Region ATGGGTCTCCTCACCTGCATGTCCTCATCCAGTTCGAAGGCAAATTCAAATGCCAAAACAACAGATTCTTCGATCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAGATCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGCGGCCCTCAATATATTAA
Protein Sequence MGLLTCMSSSSSKANSNAKTTDSSISHPQAGQHISIRTFRELKAQQMLKHTWKKTETCLIMEFSRSMEDQLEEVANLPTTHMPRQSIQGPKQRPSIY