Bhendi yellow vein Bhubhaneswar virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000881075.1 |
Isolate |
India: Bhubhaneswar, Orissa |
Release date |
2015/2/22 |
Submitter |
Venkataravanappa,V., Lakshminarayanareddy,C., Devaraju, Swarnalatha,P., Jalali,S., Krishnareddy,M. |
Host |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTTAATGGGCCCCACCACTAACTGACAAAGACATCTCCACCAATTAAAAGAGCTCTTCAGAGCTTAATTGTTATGTGGTCCCCTATTTAAACTTCGCCACCAAGTAGTGCATTGCGCACTATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGTTTTAGATGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATGCTCCTGACACATTGGGGCACGATTTAATTAGGGATTTAATTTCAGTAATTAGGGCTAGAAATTATGTCGAAGCGTCCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGTCGTCTCAACTTCGACAGCCCATATGTGAACCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAGGCATGGGCGAACAGACCCATGTACCGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTCCCAAGGGGATGTGAAGGCCCATGTAAGGTGCAGTCTTTTGATGCGAAGAATGATATTGGTCACATGGGTAAGGTTATTTGTCTTTCTGATGTTACTAGGGGTATTGGGCTGACCCATCGAGTAGGGAAACGTTTCTGTGTGAAGTCATTGTATGTTTTAGGTAAGATATGGATGGACGAGAACATGAGGTACAAGAAGGATACGAATCTCGTTATGTTTTTCCTTGTTCGTGATCGACGTCCTACAGATAAACCACAAGATTTTGGTGAAGTATTCAATATGTTTGATAATGAGCCCTCTACGGCTACTGTGAAGAACGACCAGCGTGATCGTTTTCAGGTGTTGAGGAGGTTTCAAGCAACAGTCACAGGTGGTCAATATGCTGCTAAGGAACAAGCTATAATTAGGAAATTTTATCGTGTTAACAATTATGTGGTGTATAATCACCAGGAAGCTGGGAAGTATGAAAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAACCCTGTGTATGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACAAATTAACATTAATAAAGATTGAATTTTATTGAATATGATTGGTCTACATATACAACGTGATGTAATACATTCCATAATACATGATCAACCGATTTAATTGAGATTACACCTAGATTGTTTAAATACTTGAGAACTTGGGTTTGAAATACCCTTAAGAAAAGACCAGTCGGAGGGTGTGAGGTCATCCAGATTCGGAAGGCTAGGAAACATTTGTGCATCCCCAACGCTTTCCTCAGGTTGTGATTGAACTGTATCTGAACGGTGATGATGTCTTCCTTCATTAAGAATGGCCTGTTGTGGTGTTCTGTTATCTTGAAATACAGGGGATTTTGAATCTCCCAGATAAACACGCCATTCTCTGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTGAATCCATGATCGTGGCAGGCTATGGATATGAAGTATGAACACCCACACGGTAGATCAACTCGTCGACGCCTGATCCCCTTCTTGGCTTCCCTGTGCTGCACTTTGATTGGTACCTGAGTATAATGGGCCTTCAAGGGTGATGAAGGTCGCATTCTTTAAAGCCCAATTCTTGAGTGCACTATTTTTCTCTTCATCCAAGAACTCTTTATAGCTGGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTACCGTACTTCGTGTTTGATTGCCAGTCCTTTTGGGACCCCATGAATTCCTTAAAGTGCTTTAAGTAGTGGGGATCGACGTCGTCGATGACGTTATACCATGCATCATTGCTGTAAACCCTAGGACTCAAGTCCAGATGCCCGCGTAAATAGTTGTGTGGGCCTAAAGACCTAGCCCACATTGTCTTCCCAGTACGACTATCTCCCTCAATTACTATACTTTGAGGTCTCAGGGGCCGCGCAGCGGCGTCGACAACATTTTCCGACGCCCACTCTTCAAGTTCTTCTGGAACTTGATTGAAAGAAGAAGAGGAAAAAGGAGAAACATAAGGAGCTGGTGGCTCCTGAAATATCCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAAATCTTTAGGAGCTAGTTCCTTAATGACTCTAAGAGCCTCTGACTTACTTCCCGCGTTAAGTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGCTGCCCTCCTCTTGCTGACCTTCCGTCGATCTGAAATTGGCCCCATTCGAGAATGTCCCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTGGTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGTTTGGGGATGTGAGGTCGAAGAATCTGTTGTTTTGGCACTTGTATTTTCCTTCGAATTGGATGAGAACATGCAGGTGAGGAGTCCCATCTTCGTGGAGTTCTCTGCAGATTCTAATGAATTTTTTATTAGTAGGGGTTTGTAGGTTTAGGAATTGGGAAAGTGCTTCTTCTTTAGTGAGGGAGCACTTTGGATAAGTGAGAAAATAATTTTTGGCATTTATCTGAAATCGTTTGGGTTGAGGCATGTTGACTAAGTCAATCGGTACTCAATAAACTTGGCTATGCAATTGGGGAATGGTACTCAATATATAGGTGAGTACCAAATGGCATGATTGTAATTTGGTAAAGTGTGATTTGAAATTCAAAACCCTCACGCTCCAAAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
YP_002576166.1
|
Location
|
142-507 |
Gene Name
|
AV2 |
Protein Name
|
pre-coat protein |
Coding Region
|
ATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGTTTTAGATGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATGCTCCTGACACATTGGGGCACGATTTAATTAGGGATTTAATTTCAGTAATTAGGGCTAGAAATTATGTCGAAGCGTCCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGTCGTCTCAACTTCGACAGCCCATATGTGAACCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAGGCATGGGCGAACAGACCCATGTACCGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTCCCAAGGGGATGTGA |
Protein Sequence
|
MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYAPDTLGHDLIRDLISVIRARNYVEASSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKGMGEQTHVPEAQDVQDVQKPRCPKGM |
NCBI Accession
|
YP_002576167.1
|
Location
|
302-1072 |
Gene Name
|
AV1 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGTCCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGTCGTCTCAACTTCGACAGCCCATATGTGAACCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAGGCATGGGCGAACAGACCCATGTACCGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTCCCAAGGGGATGTGAAGGCCCATGTAAGGTGCAGTCTTTTGATGCGAAGAATGATATTGGTCACATGGGTAAGGTTATTTGTCTTTCTGATGTTACTAGGGGTATTGGGCTGACCCATCGAGTAGGGAAACGTTTCTGTGTGAAGTCATTGTATGTTTTAGGTAAGATATGGATGGACGAGAACATGAGGTACAAGAAGGATACGAATCTCGTTATGTTTTTCCTTGTTCGTGATCGACGTCCTACAGATAAACCACAAGATTTTGGTGAAGTATTCAATATGTTTGATAATGAGCCCTCTACGGCTACTGTGAAGAACGACCAGCGTGATCGTTTTCAGGTGTTGAGGAGGTTTCAAGCAACAGTCACAGGTGGTCAATATGCTGCTAAGGAACAAGCTATAATTAGGAAATTTTATCGTGTTAACAATTATGTGGTGTATAATCACCAGGAAGCTGGGAAGTATGAAAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAACCCTGTGTATGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACAAATTAA |
Protein Sequence
|
MSKRPADIIISTPASKVRRRLNFDSPYVNRAAAPIVRVTKAKAWANRPMYRKPRMYRMYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLYVLGKIWMDENMRYKKDTNLVMFFLVRDRRPTDKPQDFGEVFNMFDNEPSTATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN |
NCBI Accession
|
YP_002576168.1
|
Location
|
650-1006 |
Gene Name
|
AC5 |
Protein Name
|
AC5 |
Coding Region
|
ATGAGTACATGCCATATACAACAACAAAGCATTCTCAGTGTGATTTTCATACTTCCCAGCTTCCTGGTGATTATACACCACATAATTGTTAACACGATAAAATTTCCTAATTATAGCTTGTTCCTTAGCAGCATATTGACCACCTGTGACTGTTGCTTGAAACCTCCTCAACACCTGAAAACGATCACGCTGGTCGTTCTTCACAGTAGCCGTAGAGGGCTCATTATCAAACATATTGAATACTTCACCAAAATCTTGTGGTTTATCTGTAGGACGTCGATCACGAACAAGGAAAAACATAACGAGATTCGTATCCTTCTTGTACCTCATGTTCTCGTCCATCCATATCTTACCTAA |
Protein Sequence
|
MSTCHIQQQSILSVIFILPSFLVIIHHIIVNTIKFPNYSLFLSSILTTCDCCLKPPQHLKTITLVVLHSSRRGLIIKHIEYFTKILWFICRTSITNKEKHNEIRILLVPHVLVHPYLT |
NCBI Accession
|
YP_002576169.1
|
Location
|
1075-1467 |
Gene Name
|
AC3 |
Protein Name
|
replication enhancer |
Coding Region
|
ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACAGAACACCACAACAGGCCATTCTTAATGAAGGAAGACATCATCACCGTTCAGATACAGTTCAATCACAACCTGAGGAAAGCGTTGGGGATGCACAAATGTTTCCTAGCCTTCCGAATCTGGATGACCTCACACCCTCCGACTGGTCTTTTCTTAAGGGTATTTCAAACCCAAGTTCTCAAGTATTTAAACAATCTAGGTGTAATCTCAATTAAATCGGTTGATCATGTATTATGGAATGTATTACATCACGTTGTATATGTAGACCAATCATATTCAATAAAATTCAATCTTTATTAA |
Protein Sequence
|
MDSRTGEPITAAQAENGVFIWEIQNPLYFKITEHHNRPFLMKEDIITVQIQFNHNLRKALGMHKCFLAFRIWMTSHPPTGLFLRVFQTQVLKYLNNLGVISIKSVDHVLWNVLHHVVYVDQSYSIKFNLY |
NCBI Accession
|
YP_002576170.1
|
Location
|
1160-1612 |
Gene Name
|
AC2 |
Protein Name
|
transcription activator |
Coding Region
|
ATGCGACCTTCATCACCCTTGAAGGCCCATTATACTCAGGTACCAATCAAAGTGCAGCACAGGGAAGCCAAGAAGGGGATCAGGCGTCGACGAGTTGATCTACCGTGTGGGTGTTCATACTTCATATCCATAGCCTGCCACGATCATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACAGAACACCACAACAGGCCATTCTTAATGAAGGAAGACATCATCACCGTTCAGATACAGTTCAATCACAACCTGAGGAAAGCGTTGGGGATGCACAAATGTTTCCTAGCCTTCCGAATCTGGATGACCTCACACCCTCCGACTGGTCTTTTCTTAAGGGTATTTCAAACCCAAGTTCTCAAGTATTTAAACAATCTAGGTGTAATCTCAATTAA |
Protein Sequence
|
MRPSSPLKAHYTQVPIKVQHREAKKGIRRRRVDLPCGCSYFISIACHDHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNRTPQQAILNEGRHHHRSDTVQSQPEESVGDAQMFPSLPNLDDLTPSDWSFLKGISNPSSQVFKQSRCNLN |
NCBI Accession
|
YP_002576171.1
|
Location
|
1515-2600 |
Gene Name
|
AC1 |
Protein Name
|
replicase |
Coding Region
|
ATGCCTCAACCCAAACGATTTCAGATAAATGCCAAAAATTATTTTCTCACTTATCCAAAGTGCTCCCTCACTAAAGAAGAAGCACTTTCCCAATTCCTAAACCTACAAACCCCTACTAATAAAAAATTCATTAGAATCTGCAGAGAACTCCACGAAGATGGGACTCCTCACCTGCATGTTCTCATCCAATTCGAAGGAAAATACAAGTGCCAAAACAACAGATTCTTCGACCTCACATCCCCAAACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAACCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGGGACATTCTCGAATGGGGCCAATTTCAGATCGACGGAAGGTCAGCAAGAGGAGGGCAGCAGACAGCCAACGACGCTTACGCCGCAGCACTTAACGCGGGAAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAACTAGCTCCTAAAGATTTTGTACTACAATTTCATAATTTAAATGCAAATCTAGACAGGATATTTCAGGAGCCACCAGCTCCTTATGTTTCTCCTTTTTCCTCTTCTTCTTTCAATCAAGTTCCAGAAGAACTTGAAGAGTGGGCGTCGGAAAATGTTGTCGACGCCGCTGCGCGGCCCCTGAGACCTCAAAGTATAGTAATTGAGGGAGATAGTCGTACTGGGAAGACAATGTGGGCTAGGTCTTTAGGCCCACACAACTATTTACGCGGGCATCTGGACTTGAGTCCTAGGGTTTACAGCAATGATGCATGGTATAACGTCATCGACGACGTCGATCCCCACTACTTAAAGCACTTTAAGGAATTCATGGGGTCCCAAAAGGACTGGCAATCAAACACGAAGTACGGTAAGCCAGTTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCCAATTCCAGCTATAAAGAGTTCTTGGATGAAGAGAAAAATAGTGCACTCAAGAATTGGGCTTTAAAGAATGCGACCTTCATCACCCTTGAAGGCCCATTATACTCAGGTACCAATCAAAGTGCAGCACAGGGAAGCCAAGAAGGGGATCAGGCGTCGACGAGTTGA |
Protein Sequence
|
MPQPKRFQINAKNYFLTYPKCSLTKEEALSQFLNLQTPTNKKFIRICRELHEDGTPHLHVLIQFEGKYKCQNNRFFDLTSPNRSAHFHPNIQGAKTSSDVKSYIDKDGDILEWGQFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHNLNANLDRIFQEPPAPYVSPFSSSSFNQVPEELEEWASENVVDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLRGHLDLSPRVYSNDAWYNVIDDVDPHYLKHFKEFMGSQKDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWALKNATFITLEGPLYSGTNQSAAQGSQEGDQASTS |
NCBI Accession
|
YP_002576172.1
|
Location
|
2141-2443 |
Gene Name
|
AC4 |
Protein Name
|
AC4 |
Coding Region
|
ATGGGACTCCTCACCTGCATGTTCTCATCCAATTCGAAGGAAAATACAAGTGCCAAAACAACAGATTCTTCGACCTCACATCCCCAAACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAACCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGGGACATTCTCGAATGGGGCCAATTTCAGATCGACGGAAGGTCAGCAAGAGGAGGGCAGCAGACAGCCAACGACGCTTACGCCGCAGCACTTAACGCGGGAAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAACTAG |
Protein Sequence
|
MGLLTCMFSSNSKENTSAKTTDSSTSHPQTGQHISIRTFRELKPAPTSSPTSTRTGTFSNGANFRSTEGQQEEGSRQPTTLTPQHLTREVSQRLLESLRN |