Telfairia golden mosaic virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_001678335.4 |
Isolate |
Cameroon |
Release date |
2018/8/7 |
Submitter |
Leke,W.N., Khatabi,B., Fondong,V.N., Brown,J.K. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCCCGCCCATCTCAGCCGTACGGTCCCACGCACTACTTCCTGTCGGCCAATCATAATGCACGCTGAAAGCTACTCTGCGTATGTGTTGTCTTTATATACGTGGTCCCCATACTTCCATTATCGCAATATGTGGGACCCCCTTCTGAATGAGTTTCCCGAATCAGTTCACGGTTTCCGGTCTATGTTAGCCGTAAAGTATTTGCAGGCTGTGGAGCAGACGTACGAGCCCAACACGTTGGGCCACGATTTGATTCGGGATTTGATTTGTGTTATACGTGCCAAGGACTATGTCGAAGCGACCCGGAGATATAATTATTTCCACGCCCGTCTCGAAGGTGCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGTTGCTGTCCCCATTGTCCAAGGCACAAGCAAACGACGATCATGGACGTATCGTCCCAGTTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCTGATGTCCCACGTGGCTGTGAAGGACCATGTAAGATCCAGTCGTTTGATCAGCGTGATTCAGTCGTCCATACCGGTAATGTTAGGTGTCTAAGCGATGTGACTCGCGGTGGTGGTTTAACACATCGCACTGGTAAACGGTTTTGTATTAAGTCAATTTACGTCTTAGGTAAGGTATGGATGGACGAGAATGTTAAAAAGTCCAACCACACTAACACATGTATGTTTTGGTTAGTTAGAGATAGACGTCCGTATGGTAACAGTCCTCAGGACTTTGGTCAGGTTTTTAACATGTTTGATAATGAGCCGAGTACCGCAACAGTTATGAACGACAAGCGTGATCGCTATCAGGTATTGCGGAGGTTCCAGGTAACTGTAACCGGAGGCCCGTCTGGATGTAAGGAGGCTGCTATTGTGAAGAGATTCTTTCGTCTCAATCACCATGTCACTTACAACCACCAGGAGGGCGCTAAGTACGAGAATCACACGGAGAATGCTTTGCTTTTGTATATGGCGTGTACTCACGCCTCTAACCCTGTGTATGCAAGTTTGAAGATACGGATGTATTTTTATGATTCCGTGTTAAATTAATAAAGCTTGAATTTTATATCATGTTTGTCAATTACATCAATCGTCCCGTCTAGGACGTCAAACAGTACATGAGCGACAGCTCTAACGACAAAATTAATGGAAATTACACCGACCATATCTAGGTATTTCACAACCTGAGTCCTAAAGACTTTTAAGAAAAGACCAGTCGGAGGACGTAAGGTCGTCCAGACTTTGAAGTTCAGAAAACACTTGTGAATCCCCAGTTCCTTCCTCAGGTTGTGGTTGAACCGGATTTGAATTGATATTATGTCGTGGGGGAACGAGAAGGGCCGTTCCGCGTGGTCTATTATTTTGAAGTACAGGGGATTGTGTATCGTCCAAAAGTAGACGGAATTCTGCGCTTGATCCGCAGTGATGAGTTCCCCGGTGCGCAAATCCATTCAGAGCGCAGTCTATGTGCAGGTAGAACGAGCAGCCGCAATCGAGATCAATGCGCTTCCGTCGTATCGCCTTCTTCTTGGCGATTTGGTGACTGACCTTGATCGGCACTTGAGAACAGTGGCTCTTGGATGGTGACGAAGCTCGCATTCTTTAATGCCCAAGCTTTCAAAGCTGCATTCTTTTCTTCGTCCAAGAAATCTTTATACGAGGACGTCGACCCAGGATTGCACAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAATCGGCTTTCCGTACTTTGTGTTGCTTTGCCAGTCCCGCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGATAGTGCGGGTCGACGTCATCAATGACGTTATACCATGCTTCGTTACTGTACACCTTTGGGCTTAGGTCCAAATGACCGCACAGATAATTGTGCGGACCCAACGAACGGGCCCAACAAGTTTTGCCCGTCCTACTATCCCCCTCTATTACTATACTATTGGGCCTAAAAGGCCGCGCAGCTGCAGGCTTGACGTTTTCACTGACCCATTCTTCAAGTTCCTCCGGAACTCTCGTGAAAGAAGACGACCGGAAGGGAGATGTGTATGTTTCCGGCGGAGTCTGGAAAATACGATCTAAATTACTGTTTAAATTGTGAAAATGTAATAAATAATCCTTGGGGGCCAACTCTCGTATTACATTAAGAGCCTCCGATTTACTTCCTGTGTTAAGTGCCTTTGCATATGCGTCGTTAGCTGATTGTTGGCCCCCTCGTGCCGATCTCCCGTCGATCTGAAACTCTCCCCATTCGAGTGTATCTCCGTCCTTGTCCAAATACGACTTGACGTCGGAACTGGACTTAGCGCCCTGAATGTTGGGGTGGAAACTGGTGCTACAGCTTGGGTGTACACAATCGAAGAGACGATTGTTGGTGCACGTGAGTTTCCCCTCGAACTGGATAAGCACGTGGAGATGAGGCTCCCCATTCTGATGAAGCTCTCGACAGATTTTGATGTATTTAGGATTTGTGGGAAGCGACAGGTTTCGGAGAAACGCCAAGAGAGCCTCTTTTGCGATAGAGCATTTGGGATATGTGAGGAATATATTTTTACCCTGTACTCTAAAACGTGGGTGTCTCATTTTGACAATCGATTGGAGACACCCTCCCGCAACTCTATCCCTTATAATAGAGTCAATATATACTGTCTCTATATGGCATTATTGTAAATATGTAAAGGTATACAGACCTACTAGCGGCCATCCGTTTAATATT
Gene Information
NCBI Accession
|
YP_009259492.1
|
Location
|
67-489 |
Protein Name
|
AV2 |
Coding Region
|
ATGCACGCTGAAAGCTACTCTGCGTATGTGTTGTCTTTATATACGTGGTCCCCATACTTCCATTATCGCAATATGTGGGACCCCCTTCTGAATGAGTTTCCCGAATCAGTTCACGGTTTCCGGTCTATGTTAGCCGTAAAGTATTTGCAGGCTGTGGAGCAGACGTACGAGCCCAACACGTTGGGCCACGATTTGATTCGGGATTTGATTTGTGTTATACGTGCCAAGGACTATGTCGAAGCGACCCGGAGATATAATTATTTCCACGCCCGTCTCGAAGGTGCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGTTGCTGTCCCCATTGTCCAAGGCACAAGCAAACGACGATCATGGACGTATCGTCCCAGTTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCTGA |
Protein Sequence
|
MHAESYSAYVLSLYTWSPYFHYRNMWDPLLNEFPESVHGFRSMLAVKYLQAVEQTYEPNTLGHDLIRDLICVIRAKDYVEATRRYNYFHARLEGASKAELRQPIYQPCCCPHCPRHKQTTIMDVSSQLPKAQDVQDVQKS |
NCBI Accession
|
YP_009259493.1
|
Location
|
299-1075 |
Protein Name
|
AV1 |
Coding Region
|
ATGTCGAAGCGACCCGGAGATATAATTATTTCCACGCCCGTCTCGAAGGTGCGTCGAAGGCTGAACTTCGACAGCCCATATACCAACCGTGTTGCTGTCCCCATTGTCCAAGGCACAAGCAAACGACGATCATGGACGTATCGTCCCAGTTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCTGATGTCCCACGTGGCTGTGAAGGACCATGTAAGATCCAGTCGTTTGATCAGCGTGATTCAGTCGTCCATACCGGTAATGTTAGGTGTCTAAGCGATGTGACTCGCGGTGGTGGTTTAACACATCGCACTGGTAAACGGTTTTGTATTAAGTCAATTTACGTCTTAGGTAAGGTATGGATGGACGAGAATGTTAAAAAGTCCAACCACACTAACACATGTATGTTTTGGTTAGTTAGAGATAGACGTCCGTATGGTAACAGTCCTCAGGACTTTGGTCAGGTTTTTAACATGTTTGATAATGAGCCGAGTACCGCAACAGTTATGAACGACAAGCGTGATCGCTATCAGGTATTGCGGAGGTTCCAGGTAACTGTAACCGGAGGCCCGTCTGGATGTAAGGAGGCTGCTATTGTGAAGAGATTCTTTCGTCTCAATCACCATGTCACTTACAACCACCAGGAGGGCGCTAAGTACGAGAATCACACGGAGAATGCTTTGCTTTTGTATATGGCGTGTACTCACGCCTCTAACCCTGTGTATGCAAGTTTGAAGATACGGATGTATTTTTATGATTCCGTGTTAAATTAA |
Protein Sequence
|
MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVAVPIVQGTSKRRSWTYRPSYRKPRMYRMYRSPDVPRGCEGPCKIQSFDQRDSVVHTGNVRCLSDVTRGGGLTHRTGKRFCIKSIYVLGKVWMDENVKKSNHTNTCMFWLVRDRRPYGNSPQDFGQVFNMFDNEPSTATVMNDKRDRYQVLRRFQVTVTGGPSGCKEAAIVKRFFRLNHHVTYNHQEGAKYENHTENALLLYMACTHASNPVYASLKIRMYFYDSVLN |
NCBI Accession
|
YP_009259494.1
|
Location
|
1072-1476 |
Protein Name
|
AC3 |
Coding Region
|
ATGGATTTGCGCACCGGGGAACTCATCACTGCGGATCAAGCGCAGAATTCCGTCTACTTTTGGACGATACACAATCCCCTGTACTTCAAAATAATAGACCACGCGGAACGGCCCTTCTCGTTCCCCCACGACATAATATCAATTCAAATCCGGTTCAACCACAACCTGAGGAAGGAACTGGGGATTCACAAGTGTTTTCTGAACTTCAAAGTCTGGACGACCTTACGTCCTCCGACTGGTCTTTTCTTAAAAGTCTTTAGGACTCAGGTTGTGAAATACCTAGATATGGTCGGTGTAATTTCCATTAATTTTGTCGTTAGAGCTGTCGCTCATGTACTGTTTGACGTCCTAGACGGGACGATTGATGTAATTGACAAACATGATATAAAATTCAAGCTTTATTAA |
Protein Sequence
|
MDLRTGELITADQAQNSVYFWTIHNPLYFKIIDHAERPFSFPHDIISIQIRFNHNLRKELGIHKCFLNFKVWTTLRPPTGLFLKVFRTQVVKYLDMVGVISINFVVRAVAHVLFDVLDGTIDVIDKHDIKFKLY |
NCBI Accession
|
YP_009259495.1
|
Location
|
1217-1624 |
Protein Name
|
AC2 |
Coding Region
|
ATGCGAGCTTCGTCACCATCCAAGAGCCACTGTTCTCAAGTGCCGATCAAGGTCAGTCACCAAATCGCCAAGAAGAAGGCGATACGACGGAAGCGCATTGATCTCGATTGCGGCTGCTCGTTCTACCTGCACATAGACTGCGCTCTGAATGGATTTGCGCACCGGGGAACTCATCACTGCGGATCAAGCGCAGAATTCCGTCTACTTTTGGACGATACACAATCCCCTGTACTTCAAAATAATAGACCACGCGGAACGGCCCTTCTCGTTCCCCCACGACATAATATCAATTCAAATCCGGTTCAACCACAACCTGAGGAAGGAACTGGGGATTCACAAGTGTTTTCTGAACTTCAAAGTCTGGACGACCTTACGTCCTCCGACTGGTCTTTTCTTAAAAGTCTTTAG |
Protein Sequence
|
MRASSPSKSHCSQVPIKVSHQIAKKKAIRRKRIDLDCGCSFYLHIDCALNGFAHRGTHHCGSSAEFRLLLDDTQSPVLQNNRPRGTALLVPPRHNINSNPVQPQPEEGTGDSQVFSELQSLDDLTSSDWSFLKSL |
NCBI Accession
|
YP_009259496.1
|
Location
|
1524-2609 |
Protein Name
|
AC1 |
Coding Region
|
ATGAGACACCCACGTTTTAGAGTACAGGGTAAAAATATATTCCTCACATATCCCAAATGCTCTATCGCAAAAGAGGCTCTCTTGGCGTTTCTCCGAAACCTGTCGCTTCCCACAAATCCTAAATACATCAAAATCTGTCGAGAGCTTCATCAGAATGGGGAGCCTCATCTCCACGTGCTTATCCAGTTCGAGGGGAAACTCACGTGCACCAACAATCGTCTCTTCGATTGTGTACACCCAAGCTGTAGCACCAGTTTCCACCCCAACATTCAGGGCGCTAAGTCCAGTTCCGACGTCAAGTCGTATTTGGACAAGGACGGAGATACACTCGAATGGGGAGAGTTTCAGATCGACGGGAGATCGGCACGAGGGGGCCAACAATCAGCTAACGACGCATATGCAAAGGCACTTAACACAGGAAGTAAATCGGAGGCTCTTAATGTAATACGAGAGTTGGCCCCCAAGGATTATTTATTACATTTTCACAATTTAAACAGTAATTTAGATCGTATTTTCCAGACTCCGCCGGAAACATACACATCTCCCTTCCGGTCGTCTTCTTTCACGAGAGTTCCGGAGGAACTTGAAGAATGGGTCAGTGAAAACGTCAAGCCTGCAGCTGCGCGGCCTTTTAGGCCCAATAGTATAGTAATAGAGGGGGATAGTAGGACGGGCAAAACTTGTTGGGCCCGTTCGTTGGGTCCGCACAATTATCTGTGCGGTCATTTGGACCTAAGCCCAAAGGTGTACAGTAACGAAGCATGGTATAACGTCATTGATGACGTCGACCCGCACTATCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGCGGGACTGGCAAAGCAACACAAAGTACGGAAAGCCGATTCAAATTAAAGGCGGAATTCCCACTATCTTCCTGTGCAATCCTGGGTCGACGTCCTCGTATAAAGATTTCTTGGACGAAGAAAAGAATGCAGCTTTGAAAGCTTGGGCATTAAAGAATGCGAGCTTCGTCACCATCCAAGAGCCACTGTTCTCAAGTGCCGATCAAGGTCAGTCACCAAATCGCCAAGAAGAAGGCGATACGACGGAAGCGCATTGA |
Protein Sequence
|
MRHPRFRVQGKNIFLTYPKCSIAKEALLAFLRNLSLPTNPKYIKICRELHQNGEPHLHVLIQFEGKLTCTNNRLFDCVHPSCSTSFHPNIQGAKSSSDVKSYLDKDGDTLEWGEFQIDGRSARGGQQSANDAYAKALNTGSKSEALNVIRELAPKDYLLHFHNLNSNLDRIFQTPPETYTSPFRSSSFTRVPEELEEWVSENVKPAAARPFRPNSIVIEGDSRTGKTCWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGSTSSYKDFLDEEKNAALKAWALKNASFVTIQEPLFSSADQGQSPNRQEEGDTTEAH |
NCBI Accession
|
YP_009259497.1
|
Location
|
2165-2455 |
Protein Name
|
AC4 |
Coding Region
|
ATGGGGAGCCTCATCTCCACGTGCTTATCCAGTTCGAGGGGAAACTCACGTGCACCAACAATCGTCTCTTCGATTGTGTACACCCAAGCTGTAGCACCAGTTTCCACCCCAACATTCAGGGCGCTAAGTCCAGTTCCGACGTCAAGTCGTATTTGGACAAGGACGGAGATACACTCGAATGGGGAGAGTTTCAGATCGACGGGAGATCGGCACGAGGGGGCCAACAATCAGCTAACGACGCATATGCAAAGGCACTTAACACAGGAAGTAAATCGGAGGCTCTTAATGTAA |
Protein Sequence
|
MGSLISTCLSSSRGNSRAPTIVSSIVYTQAVAPVSTPTFRALSPVPTSSRIWTRTEIHSNGESFRSTGDRHEGANNQLTTHMQRHLTQEVNRRLLM |