Bean yellow mosaic Mexico virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000893575.1 |
Isolate |
Mexico |
Release date |
2015/2/22 |
Submitter |
Idris,A.M., Brown,J.K. |
Host |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTTCCCCCCCACGTGGACGCTCGCGATTTTCTCCCCTCGCGCGTACCTTCCTCTTTAATTTGAATTAAAGGGTACCCGTTTTTTGGACCAATCGTTTTGCTCGCTGGCAGCTTAGATATTATTAACAACTTGGTGACCAAGTTGTTGGGTGACCGTTATAAATTAAAGAGGCTTGTGGCCCACTGACTTTAATTCAAAATGCCTAAGCGCGATCTACCATGGCGCTCGATCGCGGGAACATCGAAGGTGAGCCGCAATGTCAATTATTCCCCTCGTGGAGGAAGTGGGCCAAGAACCACCAAGGCCTCTGAATGGGTAAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGGACGCTAAGGACGCCCGACGTGCCACGAGGCTGTGAAGGCCCCTGCAAGGTACAGTCTTACGAACAGCGTCATGATATCTCTCATACTGGGAAGGTGATGTGTATATCCGATGTGACACGTGGTAATGGTATTACGCACCGTGTCGGTAAACGTTTTTGTGTTAAGTCTGTGTACATATTAGGTAAAGTCTGGATGGACGAGAACATCAAGTTGAAGAACCACACGAACAGCGTCATGTTCTGGTTGGTTAGGGACCGTAGACCGTATGGAACTCCTATGGATTTCGGACAGGTGTTCAACATGTTCGACAACGAGCCTAGTACCGCTACTGTGAAGAACGATCTCCGTGATCGTTATCAGGTCATGCACAAGTTCTACGCCAAGGTTACAGGTGGACAGTATGCTAGCAACGAGCAGGCATTGGTCAAGCGTTTCTGGAAGGTGAACAATCACGTTGTGTATAACCACCAAGAAGCTGGGAAGTATGAGAATCATACGGAGAACGCTCTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTATATGCAACGCTTAAGATCCGGATCTACTTCTACGATTCGATCATGAATTAATAAAGTTTGAATTTTATTGAATGATTCTCGAGAACATAATTTACATACGACCTGGCTGTTGCGAAACGAACAGCTCTGATTACATTGTTAATGGAAATAACGCCTAATCTATCTAAATACATATTAACTAAGAATCTAAACCTAGCTAAATAGGTCGACCCAGAAGCTGTCGTCGATGTCGTCCAGACTTGGAAGTTCAGGTAGGCTTTGTGGAGATGCAACGCTCTCCTCAGGTTGTGGTTGAACCGTATCTGAACGTGGAACACCCTGGTTCTCGTATACAGTGGATCCTCTACTCTGTACATCCTGAAATAGAGGGGATTTTCTATCTCCCAGATATACACGCCATTCTCCGCCTGAGGTACAGTGATGAATTCCCCTGTGCGTGAATCCATGTCCCGTGCAGCCTATGTGGAAATATATGGAGCACCCGCACCGTAAATCAATCCGCCTCCTCCTGATGGCCCTCCTCTTGGCTTGCCTGTGCGCTGTCTTGATAGAGGGCGGATGTGAGGGTGATGAAGACCGCATTCTTGATGGTCCAGTTCCTCAATGATGCGTTTTCATCTTTGTTGAGGAAATCTTTATAGCTAGCACCCTCACCAGGATTGCAAAGCACGATTGATGGGATCCCGCCTTTAATTTGAACTGGCTTGCCGTACTTACAATTTGATTGCCAGTCCTTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTTGGTACACTCGAGCATTGAAATCCAGGTGTCCACTAAGATAATTATGTGGGCCCAAAGCACGAGCCCACATTGTCTTCCCCGTTCTTGAATCACCTTCGACGATGATACTTACTGGCCTCTCCGGCCGCGCAGAGGCACCACTTCCAAAATACTGATCAGCCCATTCTTGCATCTCGTCCGGGACGTTAGTGAAGGAAGAGAGGGGAAACGGCGGAACCCACGGTTCCGGAGCCTTTGCGAAGATCCTCTCAAGGTTGGCCTTGAGATTGTGAAAATCTCTCACAAAGTCTCTAGGTTGTTCCTCCTTTAAAATTTGGAGTGCTTGTTGCACTCCGCCGGCGTTCAATGCCTTGGCGTATGAATCGTTAACAGTCTGCTTGCCTCCTCTAGCAGATCTGCCGTCGATCTGGAATTCGCCCCATTCCAGGGTATCTCCGTCCTTCTCGACATAGGACTTGACGTCGGAGCTTGATTCAGCTCCCTGATAATTTCCATGGAAATGGGATGATCTTGAAGGGGATACCAGGTCGAAGAATCTGTAATTCTGTGTTTTGAATTTCCCTTCGAACTGGATGAGCACGTGGAGATGAGGATTCCCATTTTCATGCAGCTCTCTGCAGATCTTAATATATTTCTTGTTTGTTGGGGTGTTTAATGCTAACAATTGGGAAAGTGTTTCCTCTTTGGTTAGGGAACACTGGGGATATGTGAGGAAATAGTTTTTGGCGTTAATAAGGAATTTCCTAGGAGCGGATGGCATTTTTGTAATAATGGGAGGTGAACCCAATTCAGGTCTCTCACAAAACTCTGTAGAATTGGGTCTATTGGGTTCTTATTTATACTAGAACCTCAGATAGCGCTAGTGGGGCACGTGGCGGCCATCCGCTATAATATT
Gene Information
NCBI Accession
|
YP_004429232.1
|
Location
|
220-975 |
Protein Name
|
coat protein |
Coding Region
|
ATGCCTAAGCGCGATCTACCATGGCGCTCGATCGCGGGAACATCGAAGGTGAGCCGCAATGTCAATTATTCCCCTCGTGGAGGAAGTGGGCCAAGAACCACCAAGGCCTCTGAATGGGTAAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGGACGCTAAGGACGCCCGACGTGCCACGAGGCTGTGAAGGCCCCTGCAAGGTACAGTCTTACGAACAGCGTCATGATATCTCTCATACTGGGAAGGTGATGTGTATATCCGATGTGACACGTGGTAATGGTATTACGCACCGTGTCGGTAAACGTTTTTGTGTTAAGTCTGTGTACATATTAGGTAAAGTCTGGATGGACGAGAACATCAAGTTGAAGAACCACACGAACAGCGTCATGTTCTGGTTGGTTAGGGACCGTAGACCGTATGGAACTCCTATGGATTTCGGACAGGTGTTCAACATGTTCGACAACGAGCCTAGTACCGCTACTGTGAAGAACGATCTCCGTGATCGTTATCAGGTCATGCACAAGTTCTACGCCAAGGTTACAGGTGGACAGTATGCTAGCAACGAGCAGGCATTGGTCAAGCGTTTCTGGAAGGTGAACAATCACGTTGTGTATAACCACCAAGAAGCTGGGAAGTATGAGAATCATACGGAGAACGCTCTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTATATGCAACGCTTAAGATCCGGATCTACTTCTACGATTCGATCATGAATTAA |
Protein Sequence
|
MPKRDLPWRSIAGTSKVSRNVNYSPRGGSGPRTTKASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHTGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKVWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
NCBI Accession
|
YP_004429233.1
|
Location
|
972-1370 |
Protein Name
|
REn |
Coding Region
|
ATGGATTCACGCACAGGGGAATTCATCACTGTACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTCTATTTCAGGATGTACAGAGTAGAGGATCCACTGTATACGAGAACCAGGGTGTTCCACGTTCAGATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGACGACAGCTTCTGGGTCGACCTATTTAGCTAGGTTTAGATTCTTAGTTAATATGTATTTAGATAGATTAGGCGTTATTTCCATTAACAATGTAATCAGAGCTGTTCGTTTCGCAACAGCCAGGTCGTATGTAAATTATGTTCTCGAGAATCATTCAATAAAATTCAAACTTTATTAA |
Protein Sequence
|
MDSRTGEFITVPQAENGVYIWEIENPLYFRMYRVEDPLYTRTRVFHVQIRFNHNLRRALHLHKAYLNFQVWTTSTTASGSTYLARFRFLVNMYLDRLGVISINNVIRAVRFATARSYVNYVLENHSIKFKLY |
NCBI Accession
|
YP_004429234.1
|
Location
|
1117-1506 |
Protein Name
|
TrAP |
Coding Region
|
ATGCGGTCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCGCACAGGCAAGCCAAGAGGAGGGCCATCAGGAGGAGGCGGATTGATTTACGGTGCGGGTGCTCCATATATTTCCACATAGGCTGCACGGGACATGGATTCACGCACAGGGGAATTCATCACTGTACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTCTATTTCAGGATGTACAGAGTAGAGGATCCACTGTATACGAGAACCAGGGTGTTCCACGTTCAGATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGACGACAGCTTCTGGGTCGACCTATTTAGCTAG |
Protein Sequence
|
MRSSSPSHPPSIKTAHRQAKRRAIRRRRIDLRCGCSIYFHIGCTGHGFTHRGIHHCTSGGEWRVYLGDRKSPLFQDVQSRGSTVYENQGVPRSDTVQPQPEESVASPQSLPELPSLDDIDDSFWVDLFS |
NCBI Accession
|
YP_004429235.1
|
Location
|
1418-2506 |
Protein Name
|
Rep |
Coding Region
|
ATGCCATCCGCTCCTAGGAAATTCCTTATTAACGCCAAAAACTATTTCCTCACATATCCCCAGTGTTCCCTAACCAAAGAGGAAACACTTTCCCAATTGTTAGCATTAAACACCCCAACAAACAAGAAATATATTAAGATCTGCAGAGAGCTGCATGAAAATGGGAATCCTCATCTCCACGTGCTCATCCAGTTCGAAGGGAAATTCAAAACACAGAATTACAGATTCTTCGACCTGGTATCCCCTTCAAGATCATCCCATTTCCATGGAAATTATCAGGGAGCTGAATCAAGCTCCGACGTCAAGTCCTATGTCGAGAAGGACGGAGATACCCTGGAATGGGGCGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGCAAGCAGACTGTTAACGATTCATACGCCAAGGCATTGAACGCCGGCGGAGTGCAACAAGCACTCCAAATTTTAAAGGAGGAACAACCTAGAGACTTTGTGAGAGATTTTCACAATCTCAAGGCCAACCTTGAGAGGATCTTCGCAAAGGCTCCGGAACCGTGGGTTCCGCCGTTTCCCCTCTCTTCCTTCACTAACGTCCCGGACGAGATGCAAGAATGGGCTGATCAGTATTTTGGAAGTGGTGCCTCTGCGCGGCCGGAGAGGCCAGTAAGTATCATCGTCGAAGGTGATTCAAGAACGGGGAAGACAATGTGGGCTCGTGCTTTGGGCCCACATAATTATCTTAGTGGACACCTGGATTTCAATGCTCGAGTGTACCAAAACGAAGTGGAGTATAACGTCATTGATGACGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAATTGATTGGGGCCCAAAAGGACTGGCAATCAAATTGTAAGTACGGCAAGCCAGTTCAAATTAAAGGCGGGATCCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTGCTAGCTATAAAGATTTCCTCAACAAAGATGAAAACGCATCATTGAGGAACTGGACCATCAAGAATGCGGTCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCGCACAGGCAAGCCAAGAGGAGGGCCATCAGGAGGAGGCGGATTGA |
Protein Sequence
|
MPSAPRKFLINAKNYFLTYPQCSLTKEETLSQLLALNTPTNKKYIKICRELHENGNPHLHVLIQFEGKFKTQNYRFFDLVSPSRSSHFHGNYQGAESSSDVKSYVEKDGDTLEWGEFQIDGRSARGGKQTVNDSYAKALNAGGVQQALQILKEEQPRDFVRDFHNLKANLERIFAKAPEPWVPPFPLSSFTNVPDEMQEWADQYFGSGASARPERPVSIIVEGDSRTGKTMWARALGPHNYLSGHLDFNARVYQNEVEYNVIDDVAPHYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLNKDENASLRNWTIKNAVFITLTSALYQDSAQASQEEGHQEEAD |