Bean yellow mosaic Mexico virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000893575.1
Isolate Mexico
Release date 2015/2/22
Submitter Idris,A.M., Brown,J.K.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_015487
ACCGGATGGCCGCGCGATTTTTTTCCCCCCCACGTGGACGCTCGCGATTTTCTCCCCTCGCGCGTACCTTCCTCTTTAATTTGAATTAAAGGGTACCCGTTTTTTGGACCAATCGTTTTGCTCGCTGGCAGCTTAGATATTATTAACAACTTGGTGACCAAGTTGTTGGGTGACCGTTATAAATTAAAGAGGCTTGTGGCCCACTGACTTTAATTCAAAATGCCTAAGCGCGATCTACCATGGCGCTCGATCGCGGGAACATCGAAGGTGAGCCGCAATGTCAATTATTCCCCTCGTGGAGGAAGTGGGCCAAGAACCACCAAGGCCTCTGAATGGGTAAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGGACGCTAAGGACGCCCGACGTGCCACGAGGCTGTGAAGGCCCCTGCAAGGTACAGTCTTACGAACAGCGTCATGATATCTCTCATACTGGGAAGGTGATGTGTATATCCGATGTGACACGTGGTAATGGTATTACGCACCGTGTCGGTAAACGTTTTTGTGTTAAGTCTGTGTACATATTAGGTAAAGTCTGGATGGACGAGAACATCAAGTTGAAGAACCACACGAACAGCGTCATGTTCTGGTTGGTTAGGGACCGTAGACCGTATGGAACTCCTATGGATTTCGGACAGGTGTTCAACATGTTCGACAACGAGCCTAGTACCGCTACTGTGAAGAACGATCTCCGTGATCGTTATCAGGTCATGCACAAGTTCTACGCCAAGGTTACAGGTGGACAGTATGCTAGCAACGAGCAGGCATTGGTCAAGCGTTTCTGGAAGGTGAACAATCACGTTGTGTATAACCACCAAGAAGCTGGGAAGTATGAGAATCATACGGAGAACGCTCTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTATATGCAACGCTTAAGATCCGGATCTACTTCTACGATTCGATCATGAATTAATAAAGTTTGAATTTTATTGAATGATTCTCGAGAACATAATTTACATACGACCTGGCTGTTGCGAAACGAACAGCTCTGATTACATTGTTAATGGAAATAACGCCTAATCTATCTAAATACATATTAACTAAGAATCTAAACCTAGCTAAATAGGTCGACCCAGAAGCTGTCGTCGATGTCGTCCAGACTTGGAAGTTCAGGTAGGCTTTGTGGAGATGCAACGCTCTCCTCAGGTTGTGGTTGAACCGTATCTGAACGTGGAACACCCTGGTTCTCGTATACAGTGGATCCTCTACTCTGTACATCCTGAAATAGAGGGGATTTTCTATCTCCCAGATATACACGCCATTCTCCGCCTGAGGTACAGTGATGAATTCCCCTGTGCGTGAATCCATGTCCCGTGCAGCCTATGTGGAAATATATGGAGCACCCGCACCGTAAATCAATCCGCCTCCTCCTGATGGCCCTCCTCTTGGCTTGCCTGTGCGCTGTCTTGATAGAGGGCGGATGTGAGGGTGATGAAGACCGCATTCTTGATGGTCCAGTTCCTCAATGATGCGTTTTCATCTTTGTTGAGGAAATCTTTATAGCTAGCACCCTCACCAGGATTGCAAAGCACGATTGATGGGATCCCGCCTTTAATTTGAACTGGCTTGCCGTACTTACAATTTGATTGCCAGTCCTTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTTGGTACACTCGAGCATTGAAATCCAGGTGTCCACTAAGATAATTATGTGGGCCCAAAGCACGAGCCCACATTGTCTTCCCCGTTCTTGAATCACCTTCGACGATGATACTTACTGGCCTCTCCGGCCGCGCAGAGGCACCACTTCCAAAATACTGATCAGCCCATTCTTGCATCTCGTCCGGGACGTTAGTGAAGGAAGAGAGGGGAAACGGCGGAACCCACGGTTCCGGAGCCTTTGCGAAGATCCTCTCAAGGTTGGCCTTGAGATTGTGAAAATCTCTCACAAAGTCTCTAGGTTGTTCCTCCTTTAAAATTTGGAGTGCTTGTTGCACTCCGCCGGCGTTCAATGCCTTGGCGTATGAATCGTTAACAGTCTGCTTGCCTCCTCTAGCAGATCTGCCGTCGATCTGGAATTCGCCCCATTCCAGGGTATCTCCGTCCTTCTCGACATAGGACTTGACGTCGGAGCTTGATTCAGCTCCCTGATAATTTCCATGGAAATGGGATGATCTTGAAGGGGATACCAGGTCGAAGAATCTGTAATTCTGTGTTTTGAATTTCCCTTCGAACTGGATGAGCACGTGGAGATGAGGATTCCCATTTTCATGCAGCTCTCTGCAGATCTTAATATATTTCTTGTTTGTTGGGGTGTTTAATGCTAACAATTGGGAAAGTGTTTCCTCTTTGGTTAGGGAACACTGGGGATATGTGAGGAAATAGTTTTTGGCGTTAATAAGGAATTTCCTAGGAGCGGATGGCATTTTTGTAATAATGGGAGGTGAACCCAATTCAGGTCTCTCACAAAACTCTGTAGAATTGGGTCTATTGGGTTCTTATTTATACTAGAACCTCAGATAGCGCTAGTGGGGCACGTGGCGGCCATCCGCTATAATATT

Gene Information

NCBI Accession YP_004429232.1
Location 220-975
Protein Name coat protein
Coding Region ATGCCTAAGCGCGATCTACCATGGCGCTCGATCGCGGGAACATCGAAGGTGAGCCGCAATGTCAATTATTCCCCTCGTGGAGGAAGTGGGCCAAGAACCACCAAGGCCTCTGAATGGGTAAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGGACGCTAAGGACGCCCGACGTGCCACGAGGCTGTGAAGGCCCCTGCAAGGTACAGTCTTACGAACAGCGTCATGATATCTCTCATACTGGGAAGGTGATGTGTATATCCGATGTGACACGTGGTAATGGTATTACGCACCGTGTCGGTAAACGTTTTTGTGTTAAGTCTGTGTACATATTAGGTAAAGTCTGGATGGACGAGAACATCAAGTTGAAGAACCACACGAACAGCGTCATGTTCTGGTTGGTTAGGGACCGTAGACCGTATGGAACTCCTATGGATTTCGGACAGGTGTTCAACATGTTCGACAACGAGCCTAGTACCGCTACTGTGAAGAACGATCTCCGTGATCGTTATCAGGTCATGCACAAGTTCTACGCCAAGGTTACAGGTGGACAGTATGCTAGCAACGAGCAGGCATTGGTCAAGCGTTTCTGGAAGGTGAACAATCACGTTGTGTATAACCACCAAGAAGCTGGGAAGTATGAGAATCATACGGAGAACGCTCTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTATATGCAACGCTTAAGATCCGGATCTACTTCTACGATTCGATCATGAATTAA
Protein Sequence MPKRDLPWRSIAGTSKVSRNVNYSPRGGSGPRTTKASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHTGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKVWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN

NCBI Accession YP_004429233.1
Location 972-1370
Protein Name REn
Coding Region ATGGATTCACGCACAGGGGAATTCATCACTGTACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTCTATTTCAGGATGTACAGAGTAGAGGATCCACTGTATACGAGAACCAGGGTGTTCCACGTTCAGATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGACGACAGCTTCTGGGTCGACCTATTTAGCTAGGTTTAGATTCTTAGTTAATATGTATTTAGATAGATTAGGCGTTATTTCCATTAACAATGTAATCAGAGCTGTTCGTTTCGCAACAGCCAGGTCGTATGTAAATTATGTTCTCGAGAATCATTCAATAAAATTCAAACTTTATTAA
Protein Sequence MDSRTGEFITVPQAENGVYIWEIENPLYFRMYRVEDPLYTRTRVFHVQIRFNHNLRRALHLHKAYLNFQVWTTSTTASGSTYLARFRFLVNMYLDRLGVISINNVIRAVRFATARSYVNYVLENHSIKFKLY

NCBI Accession YP_004429234.1
Location 1117-1506
Protein Name TrAP
Coding Region ATGCGGTCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCGCACAGGCAAGCCAAGAGGAGGGCCATCAGGAGGAGGCGGATTGATTTACGGTGCGGGTGCTCCATATATTTCCACATAGGCTGCACGGGACATGGATTCACGCACAGGGGAATTCATCACTGTACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTCTATTTCAGGATGTACAGAGTAGAGGATCCACTGTATACGAGAACCAGGGTGTTCCACGTTCAGATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGACGACAGCTTCTGGGTCGACCTATTTAGCTAG
Protein Sequence MRSSSPSHPPSIKTAHRQAKRRAIRRRRIDLRCGCSIYFHIGCTGHGFTHRGIHHCTSGGEWRVYLGDRKSPLFQDVQSRGSTVYENQGVPRSDTVQPQPEESVASPQSLPELPSLDDIDDSFWVDLFS

NCBI Accession YP_004429235.1
Location 1418-2506
Protein Name Rep
Coding Region ATGCCATCCGCTCCTAGGAAATTCCTTATTAACGCCAAAAACTATTTCCTCACATATCCCCAGTGTTCCCTAACCAAAGAGGAAACACTTTCCCAATTGTTAGCATTAAACACCCCAACAAACAAGAAATATATTAAGATCTGCAGAGAGCTGCATGAAAATGGGAATCCTCATCTCCACGTGCTCATCCAGTTCGAAGGGAAATTCAAAACACAGAATTACAGATTCTTCGACCTGGTATCCCCTTCAAGATCATCCCATTTCCATGGAAATTATCAGGGAGCTGAATCAAGCTCCGACGTCAAGTCCTATGTCGAGAAGGACGGAGATACCCTGGAATGGGGCGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGCAAGCAGACTGTTAACGATTCATACGCCAAGGCATTGAACGCCGGCGGAGTGCAACAAGCACTCCAAATTTTAAAGGAGGAACAACCTAGAGACTTTGTGAGAGATTTTCACAATCTCAAGGCCAACCTTGAGAGGATCTTCGCAAAGGCTCCGGAACCGTGGGTTCCGCCGTTTCCCCTCTCTTCCTTCACTAACGTCCCGGACGAGATGCAAGAATGGGCTGATCAGTATTTTGGAAGTGGTGCCTCTGCGCGGCCGGAGAGGCCAGTAAGTATCATCGTCGAAGGTGATTCAAGAACGGGGAAGACAATGTGGGCTCGTGCTTTGGGCCCACATAATTATCTTAGTGGACACCTGGATTTCAATGCTCGAGTGTACCAAAACGAAGTGGAGTATAACGTCATTGATGACGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAATTGATTGGGGCCCAAAAGGACTGGCAATCAAATTGTAAGTACGGCAAGCCAGTTCAAATTAAAGGCGGGATCCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTGCTAGCTATAAAGATTTCCTCAACAAAGATGAAAACGCATCATTGAGGAACTGGACCATCAAGAATGCGGTCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCGCACAGGCAAGCCAAGAGGAGGGCCATCAGGAGGAGGCGGATTGA
Protein Sequence MPSAPRKFLINAKNYFLTYPQCSLTKEETLSQLLALNTPTNKKYIKICRELHENGNPHLHVLIQFEGKFKTQNYRFFDLVSPSRSSHFHGNYQGAESSSDVKSYVEKDGDTLEWGEFQIDGRSARGGKQTVNDSYAKALNAGGVQQALQILKEEQPRDFVRDFHNLKANLERIFAKAPEPWVPPFPLSSFTNVPDEMQEWADQYFGSGASARPERPVSIIVEGDSRTGKTMWARALGPHNYLSGHLDFNARVYQNEVEYNVIDDVAPHYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLNKDENASLRNWTIKNAVFITLTSALYQDSAQASQEEGHQEEAD