Sweet potato leaf curl Sichuan virus 1


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002823585.1
Isolate China: Sichuan
Release date 2018/8/25
Submitter Liu,Q., Zhang,Z., Qiao,Q., Qin,Y., Zhang,D., Tian,Y., Wang,S., Wang,Y., Liu,Q.L., Zhang,Z.C., Qin,Y.H., Zhang,D.S., Tian,Y.T., Wang,Y.J.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038465
ACCGGTGCCCGCGCAAATTTTTAATGTGGGCCCCACGCGCTTTGCTTTAATCATTAAAAGCAGCGTCTTGTAGCATTCTTTGTCGCCAAGGATGGATTTGTGGGACCCACTGCAGAACCCTCTCCCTGATACTTTATACGGTTTTCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAGCCAGGAACCTTAGGGTTCGAGCTCTGTTCGGAGCTAATCCGTATATTCAGAGTCAGGCAGTATGACAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCAGATGAAGAGAAGGAAGGGTGACCGCATCCCGAAGGGATGTGTGGGTCCTTGTAAGGTCCAGGACTATGAGTTCAAGATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGAACTGGGCTTACCCATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGACGGTAAAGTCTGGATGGACGACAACGTCGCCAAGAGAGACCATACCAACATTATTACTTACTGGTTGATTCGAGATAGGAGGCCCAATAAGGACCCATTGACGTTTGCACAGGCCTTTACTATGTATGATAATGAACCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTCTTGAAGAAATTCTCTGTTACTGTGTCTGGTGGGCCTTATAGCCACAAGGAGCAGGCGTTAGTTAGGAAGTTTTTTAAGAGTTTGTATAATCATGTTACTTATAATCATAAGGAAGAAGCTAAGTATGAAAATCATTTAGAAAATGCATTAATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTATATCAGACCCTGCGTTGCAGGGCTTATTTCTATGATTCGCACAATAATTAATAAAGAAGTACTTTTATATCATCTTTGCAATCTATTACATCGACTTCTTCTACCCACAAGAACTCTTGTGGTAAATGTCTAATTACATAAACTAAGTTATACAATGAAAAATAACCTAAACTACTTAATTCATTACAAATACGCCATTTAAGGCGTGTCAAAATACCAGTCCAACTGTGAATAGCACCAGTCAGACGGGTTGAAATTATCCTGAACTGCAGGAATATCTTGTGGAAGCCCAGTTGCTTCATCTCGCGGTGGTTCACTTGCAGTTGGAACTTCATGATTGTTTTCCCCGCTTCGCTCCGGTGGGCGTATAAACACTTGAGGAAAAACGGTGCAGTCCGACCAATTGACATGGGGTTGTCGAAGAATTCGACTGCTCTCGTAGTCTGTGCATGACTTAGTAATTCCCCAGTGCGTGAATCCATTCTGGTACTTGCACTGAGGTGTGATGAAAGCTGAACAGCCGCACTGCTTCCACACTATCCTGGTCCTTTGCTCTGGTATGCGGCGTTTTTTTTTAGCCGCTGCGTGAATTGGCTCCTGAATTGGCGCCTTCCTCTTGTCTCCAGAATGGGCTTCTGACATTACAGAATACTGCGTTCTTGCAAGCCCACTGCCTCAGTGCGTCTTGTTCTGGCTTATCTAGCCAGGATTTAAATGATGATCCTTCGCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATGGCCAGTCCCTCTGGGCCCCAATGAATTCCTTAAAGTGCTTTAGGTATTGGGGGTCGACGTCATCAATGACGTTGTACCACGCACTGTTACTGTACACTTTAGGGCTTAGATCTAAATGCCCACACAAATAATTGTGAGGACCCAAAGACCTGGCCCATACTGTTTTGCCTATTCTGCTTGGGCCTTCTATAACAATGGATATGGGTCTATCCGGCCGCGCAGCGGAATCCATGACATTTTCAGCGGCCCAATTGCTGATAATGTCAGGAACGGCATTAAAAGAAGAAGAAGAAAAAGGTGAAGAATATACAGAAGGAGGAGGAGAAAAAATCCTATCTAAATTATTATTAATATTATGGAATTGAAGAACAAAGTCTTTTGGACACAATTCCTTTATTATCTGTAACGCTTCAGATTTACACCCAGTATTTAATGCCTGGGCGTAAGCATCGTTAGCCGTTTGCTGACCTCCTCTAGCACTTCTTCCGTCGACCTGGAAGACTCCACTGTCAACAAAATCTTGGTCCTTCTCAATGTAGGCCTTGACATCGGACGAGGACTTTGCTGATTGGAAATTGGGGTGGTATTGTGTAGAGGAGTTGGGGTGAGTAAGGTCGAAGTGCCTGGGGTTTGTGAATTGGCACTTACCTTTGAATTGGATGAGAGCATGGAGGTGCAGGCTCCCATCCTGGTGTTTCTCTTGAGCAACTCGGATAAATAATTTATCAGAAGGGCATTGAATGCCCTTTAATAACTCAAGGACTGATTCTTTAGATAGGGGGCATTTTGGGTAAGTGAGGAATATATTTTTGGCTTGAAGTCTAAAGCCGGGTGCTCTCACCATGTTGACTTGGTCAATTGGAGTAACACCTTCCTGCCATGCAATTGGAGTAATGGAGTAGAATATATAGTGGTTGGATTTTCAGACCTCCATTTTGAAATTCAAATTCCGACAACTTTGGGCCCACAAAAGCGGGCACCGTATTAATATT

Gene Information

NCBI Accession YP_009506501.1
Location 92-433
Protein Name AV2
Coding Region ATGGATTTGTGGGACCCACTGCAGAACCCTCTCCCTGATACTTTATACGGTTTTCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAGCCAGGAACCTTAGGGTTCGAGCTCTGTTCGGAGCTAATCCGTATATTCAGAGTCAGGCAGTATGACAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCAGATGAAGAGAAGGAAGGGTGA
Protein Sequence MDLWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCSELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRPDEEKEG

NCBI Accession YP_009506502.1
Location 258-1022
Protein Name AV1
Coding Region ATGACAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCAGATGAAGAGAAGGAAGGGTGACCGCATCCCGAAGGGATGTGTGGGTCCTTGTAAGGTCCAGGACTATGAGTTCAAGATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGAACTGGGCTTACCCATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGACGGTAAAGTCTGGATGGACGACAACGTCGCCAAGAGAGACCATACCAACATTATTACTTACTGGTTGATTCGAGATAGGAGGCCCAATAAGGACCCATTGACGTTTGCACAGGCCTTTACTATGTATGATAATGAACCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTCTTGAAGAAATTCTCTGTTACTGTGTCTGGTGGGCCTTATAGCCACAAGGAGCAGGCGTTAGTTAGGAAGTTTTTTAAGAGTTTGTATAATCATGTTACTTATAATCATAAGGAAGAAGCTAAGTATGAAAATCATTTAGAAAATGCATTAATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTATATCAGACCCTGCGTTGCAGGGCTTATTTCTATGATTCGCACAATAATTAA
Protein Sequence MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYVPVSRGVQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGKRVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFAQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALVRKFFKSLYNHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN

NCBI Accession YP_009506503.1
Location 1019-1453
Protein Name AC3
Coding Region ATGGATTCACGCACTGGGGAATTACTAAGTCATGCACAGACTACGAGAGCAGTCGAATTCTTCGACAACCCCATGTCAATTGGTCGGACTGCACCGTTTTTCCTCAAGTGTTTATACGCCCACCGGAGCGAAGCGGGGAAAACAATCATGAAGTTCCAACTGCAAGTGAACCACCGCGAGATGAAGCAACTGGGCTTCCACAAGATATTCCTGCAGTTCAGGATAATTTCAACCCGTCTGACTGGTGCTATTCACAGTTGGACTGGTATTTTGACACGCCTTAAATGGCGTATTTGTAATGAATTAAGTAGTTTAGGTTATTTTTCATTGTATAACTTAGTTTATGTAATTAGACATTTACCACAAGAGTTCTTGTGGGTAGAAGAAGTCGATGTAATAGATTGCAAAGATGATATAAAAGTACTTCTTTATTAA
Protein Sequence MDSRTGELLSHAQTTRAVEFFDNPMSIGRTAPFFLKCLYAHRSEAGKTIMKFQLQVNHREMKQLGFHKIFLQFRIISTRLTGAIHSWTGILTRLKWRICNELSSLGYFSLYNLVYVIRHLPQEFLWVEEVDVIDCKDDIKVLLY

NCBI Accession YP_009506504.1
Location 1170-1613
Protein Name AC2
Coding Region ATGTCAGAAGCCCATTCTGGAGACAAGAGGAAGGCGCCAATTCAGGAGCCAATTCACGCAGCGGCTAAAAAAAAACGCCGCATACCAGAGCAAAGGACCAGGATAGTGTGGAAGCAGTGCGGCTGTTCAGCTTTCATCACACCTCAGTGCAAGTACCAGAATGGATTCACGCACTGGGGAATTACTAAGTCATGCACAGACTACGAGAGCAGTCGAATTCTTCGACAACCCCATGTCAATTGGTCGGACTGCACCGTTTTTCCTCAAGTGTTTATACGCCCACCGGAGCGAAGCGGGGAAAACAATCATGAAGTTCCAACTGCAAGTGAACCACCGCGAGATGAAGCAACTGGGCTTCCACAAGATATTCCTGCAGTTCAGGATAATTTCAACCCGTCTGACTGGTGCTATTCACAGTTGGACTGGTATTTTGACACGCCTTAA
Protein Sequence MSEAHSGDKRKAPIQEPIHAAAKKKRRIPEQRTRIVWKQCGCSAFITPQCKYQNGFTHWGITKSCTDYESSRILRQPHVNWSDCTVFPQVFIRPPERSGENNHEVPTASEPPRDEATGLPQDIPAVQDNFNPSDWCYSQLDWYFDTP

NCBI Accession YP_009506505.1
Location 1546-2616
Protein Name AC1
Coding Region ATGGTGAGAGCACCCGGCTTTAGACTTCAAGCCAAAAATATATTCCTCACTTACCCAAAATGCCCCCTATCTAAAGAATCAGTCCTTGAGTTATTAAAGGGCATTCAATGCCCTTCTGATAAATTATTTATCCGAGTTGCTCAAGAGAAACACCAGGATGGGAGCCTGCACCTCCATGCTCTCATCCAATTCAAAGGTAAGTGCCAATTCACAAACCCCAGGCACTTCGACCTTACTCACCCCAACTCCTCTACACAATACCACCCCAATTTCCAATCAGCAAAGTCCTCGTCCGATGTCAAGGCCTACATTGAGAAGGACCAAGATTTTGTTGACAGTGGAGTCTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTCAGCAAACGGCTAACGATGCTTACGCCCAGGCATTAAATACTGGGTGTAAATCTGAAGCGTTACAGATAATAAAGGAATTGTGTCCAAAAGACTTTGTTCTTCAATTCCATAATATTAATAATAATTTAGATAGGATTTTTTCTCCTCCTCCTTCTGTATATTCTTCACCTTTTTCTTCTTCTTCTTTTAATGCCGTTCCTGACATTATCAGCAATTGGGCCGCTGAAAATGTCATGGATTCCGCTGCGCGGCCGGATAGACCCATATCCATTGTTATAGAAGGCCCAAGCAGAATAGGCAAAACAGTATGGGCCAGGTCTTTGGGTCCTCACAATTATTTGTGTGGGCATTTAGATCTAAGCCCTAAAGTGTACAGTAACAGTGCGTGGTACAACGTCATTGATGACGTCGACCCCCAATACCTAAAGCACTTTAAGGAATTCATTGGGGCCCAGAGGGACTGGCCATCAAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGCGAAGGATCATCATTTAAATCCTGGCTAGATAAGCCAGAACAAGACGCACTGAGGCAGTGGGCTTGCAAGAACGCAGTATTCTGTAATGTCAGAAGCCCATTCTGGAGACAAGAGGAAGGCGCCAATTCAGGAGCCAATTCACGCAGCGGCTAA
Protein Sequence MVRAPGFRLQAKNIFLTYPKCPLSKESVLELLKGIQCPSDKLFIRVAQEKHQDGSLHLHALIQFKGKCQFTNPRHFDLTHPNSSTQYHPNFQSAKSSSDVKAYIEKDQDFVDSGVFQVDGRSARGGQQTANDAYAQALNTGCKSEALQIIKELCPKDFVLQFHNINNNLDRIFSPPPSVYSSPFSSSSFNAVPDIISNWAAENVMDSAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVDPQYLKHFKEFIGAQRDWPSNTKYGKPVQIKGGIPTIFLCNPGEGSSFKSWLDKPEQDALRQWACKNAVFCNVRSPFWRQEEGANSGANSRSG

NCBI Accession YP_009506506.1
Location 2202-2459
Protein Name AC4
Coding Region ATGGGAGCCTGCACCTCCATGCTCTCATCCAATTCAAAGGTAAGTGCCAATTCACAAACCCCAGGCACTTCGACCTTACTCACCCCAACTCCTCTACACAATACCACCCCAATTTCCAATCAGCAAAGTCCTCGTCCGATGTCAAGGCCTACATTGAGAAGGACCAAGATTTTGTTGACAGTGGAGTCTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTCAGCAAACGGCTAACGATGCTTACGCCCAGGCATTAA
Protein Sequence MGACTSMLSSNSKVSANSQTPGTSTLLTPTPLHNTTPISNQQSPRPMSRPTLRRTKILLTVESSRSTEEVLEEVSKRLTMLTPRH