Sweet potato leaf curl Henan virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000907875.1 |
Isolate |
China: Henan |
Release date |
2015/2/22 |
Submitter |
Liu,Q., Zhang,Z., Li,J., Qiao,Q., Qin,Y., Zhang,D., Tian,Y., Wang,S., Wang,Y., Liu,Q.L., Zhang,Z.C., Qin,Y.H., Zhang,D.S., Tian,Y.T., Wang,Y.J. |
Host |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGTGCCCGCGCCCCCCTTTATTGTGGGCCCCACACGCTTTACTTTAATTATTTAAAGGCGTACCTGTTTCAGTCTTGGTCGCCAAGAATGGATTTATGGGACCCACTTCAGAACCCTCTCCCAGATACTTTATACGGTTTTCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAACCAGGAACTCTAGGGTTCGAGCTTTGTTCCGATCTCATTCGCATACTGCGCGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGTTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGGGATCGCATTCCGAAGGGGTGCGTAGGTCCTTGTAAGGTACAGGATTATGAATTCAAGATGGATGTCCCACATAGTGGCACCTTTGTGTGTGTTTCTGATTTTACAAGGGGTACTGGGCTTACACATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGATGGTAAGGTTTGGATGGACGACAACGTGGCCAAGAGGGACCATACAAACATCATTACTTACTGGTTGATCCGAGATAGAAGACCCAATAAGGATCCATTGACGTTTGCACAGGCCTTCACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTTCTGAAGAAATTCTCTGTTACTGTATCTGGTGGTCCTTATAACCACAAGGAGCAGGCTTTAGTTAGGAAGTTTTTTAAGGGATTGTATAATCATGTTACTTATAATCATAAGGAAGAGGCTAAATATGAGAATCATTTAGAGAATGCATTAATGTTGTATTCTGCTAGCAGCCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCATAATAATTAATAAAGAAGTACTTTTATATCATCTTTGCAATCTATTACATCGACTTCGTCTATCCATCTAACTGATTCAGGCAAATGCCTGATTACATAAACTAAATTAATAAGAGAAAAAAACCCTAAACTAGCTAAGCTATTACATATATGCCATTTAAGGCGTTGCAAAATACCAGTCCAATTGGGAATAGCACCAGTTAGACGGGTCGTCAAGATCCGGAATTGGAGGAAGATCTTGTGGAATCCCAGTTGTCTCCTTTCCCTGTAGTTGACCCTCAGCTGGAATTTGAGGATGGTTCTCCCCTGTGCGCTCTCGTGGACATACATCAGTCTGAGGTGGAATGGTGCAGTCCGACCCACAGACATGGGGTTGGTGTCGAATTCGACTGCTCTCGTAGTCTGAGCATGACTTAGTGATTCCCCTGTGCGTGAATCCATGCTGGTACTTGCAGGTTGTGGTGATGAAGGCTGAACAGCCGCAACCCTTCCACACTATCCTTGTCCTCTGTTCAGGAACTTTCCTCTTGGCCTTCTTCGCCTCTGTGTGTAGTGGCTCCTGAATGGGACACTTCCTCTTGTACCCAGAAAGGGGATTGGACATCGCAGAATAAAGCGTTTGCTGTTGCCCAAATCTTGAGTGCTCCCTGCTCTGGTTTGTCCAACCAGAGTTTAAATGACGAGCCCTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTATTTACAGTTGGATTGCCAGTCCTTCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTATTGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTGTATACTTTTGGACTTAAGTCTAAATGACCACACAGATAATTATGTGGTCCTAAAGATCTAGCCCAGACTGTTTTACCTATTCTACTTGGGCCTTCTATTACAATACTAATGGGCCTATCTGGCCGCGCAGCGGCATCCATGACATTTTCAGCAGCCCAATCGCTGATAATGTCAGGAACATTATTGAAAGAAGAAAGAGAAAAAGGAGAAGAATATACAGAAGGAGGAGGAGAAAAAATCCTATCTAAATTATTATTAATATTATGGAATTGAAGAACAAAGTCTTTTGGACACAATTCCTTTATTATCTGTAACGCTTCAGATTTACACCCAGTATTTAATGCCTGGGCGTAAGCATCGTTAGCCGTTTGCTGACCTCCTCTAGCACTTCTTCCGTCGACCTGGAAGACTCCACTGTCAACAAAATCTTGGTCCTTCTCAATGTAGGCCTTGACATCGGAAGAGGACTTTGCTGATTGGAAATTGGGGTGGTATTGTGTAGAGGAGTTGGGATGAGTAAGGTCGAAGTGCCTGGGGTTTGTGAATTGGCACTTACCTTTGAATTGGATGAGAGCATGGAGGTGCAGGCTCCCATCCTGGTGTTTCTCTTGAGCAACTCGGATAAATAATTTATCAGAAGGGCATTGAATGCCCTTTAATAGCTCAAGGACTGTGTCTTTAGATAGGGGGCATTTTGGGTAAGTGAGGAATATATTTTTGGCTTGAAGTCTAAAGCCGGGTGCTCTCACCATGTTGACTTGGTCAATTGGAGTAACACCTTCTTGCCATGCAATTGGAGTAATGGAGTAGAATATATAGTGGTTGGATTTTCAGACCTCCATTTTGAAATTCAAATTCCGACAACTTTGGGCCCACAAAAGCGGGCACCGTATTAATATT
Gene Information
NCBI Accession
|
YP_008198569.1
|
Location
|
91-465 |
Protein Name
|
AV2 |
Coding Region
|
ATGGATTTATGGGACCCACTTCAGAACCCTCTCCCAGATACTTTATACGGTTTTCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAACCAGGAACTCTAGGGTTCGAGCTTTGTTCCGATCTCATTCGCATACTGCGCGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGTTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGGGATCGCATTCCGAAGGGGTGCGTAGGTCCTTGTAA |
Protein Sequence
|
MDLWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCSDLIRILRVKQYGRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFSKRPDEEKEGGSHSEGVRRSL |
NCBI Accession
|
YP_008198570.1
|
Location
|
257-1021 |
Protein Name
|
AV1 |
Coding Region
|
ATGGTAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGTTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGGGATCGCATTCCGAAGGGGTGCGTAGGTCCTTGTAAGGTACAGGATTATGAATTCAAGATGGATGTCCCACATAGTGGCACCTTTGTGTGTGTTTCTGATTTTACAAGGGGTACTGGGCTTACACATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGATGGTAAGGTTTGGATGGACGACAACGTGGCCAAGAGGGACCATACAAACATCATTACTTACTGGTTGATCCGAGATAGAAGACCCAATAAGGATCCATTGACGTTTGCACAGGCCTTCACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTTCTGAAGAAATTCTCTGTTACTGTATCTGGTGGTCCTTATAACCACAAGGAGCAGGCTTTAGTTAGGAAGTTTTTTAAGGGATTGTATAATCATGTTACTTATAATCATAAGGAAGAGGCTAAATATGAGAATCATTTAGAGAATGCATTAATGTTGTATTCTGCTAGCAGCCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCATAATAATTAA |
Protein Sequence
|
MVGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYVPVSRSVQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGKRVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFAQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN |
NCBI Accession
|
YP_008198571.1
|
Location
|
1018-1452 |
Protein Name
|
AC3 |
Coding Region
|
ATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCACCTCAGACTGATGTATGTCCACGAGAGCGCACAGGGGAGAACCATCCTCAAATTCCAGCTGAGGGTCAACTACAGGGAAAGGAGACAACTGGGATTCCACAAGATCTTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCCCAATTGGACTGGTATTTTGCAACGCCTTAAATGGCATATATGTAATAGCTTAGCTAGTTTAGGGTTTTTTTCTCTTATTAATTTAGTTTATGTAATCAGGCATTTGCCTGAATCAGTTAGATGGATAGACGAAGTCGATGTAATAGATTGCAAAGATGATATAAAAGTACTTCTTTATTAA |
Protein Sequence
|
MDSRTGESLSHAQTTRAVEFDTNPMSVGRTAPFHLRLMYVHESAQGRTILKFQLRVNYRERRQLGFHKIFLQFRILTTRLTGAIPNWTGILQRLKWHICNSLASLGFFSLINLVYVIRHLPESVRWIDEVDVIDCKDDIKVLLY |
NCBI Accession
|
YP_008198572.1
|
Location
|
1169-1615 |
Protein Name
|
AC2 |
Coding Region
|
ATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCCATTCAGGAGCCACTACACACAGAGGCGAAGAAGGCCAAGAGGAAAGTTCCTGAACAGAGGACAAGGATAGTGTGGAAGGGTTGCGGCTGTTCAGCCTTCATCACCACAACCTGCAAGTACCAGCATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCACCTCAGACTGATGTATGTCCACGAGAGCGCACAGGGGAGAACCATCCTCAAATTCCAGCTGAGGGTCAACTACAGGGAAAGGAGACAACTGGGATTCCACAAGATCTTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCCCAATTGGACTGGTATTTTGCAACGCCTTAA |
Protein Sequence
|
MSNPLSGYKRKCPIQEPLHTEAKKAKRKVPEQRTRIVWKGCGCSAFITTTCKYQHGFTHRGITKSCSDYESSRIRHQPHVCGSDCTIPPQTDVCPRERTGENHPQIPAEGQLQGKETTGIPQDLPPIPDLDDPSNWCYSQLDWYFATP |
NCBI Accession
|
YP_008198573.1
|
Location
|
1524-2618 |
Protein Name
|
AC1 |
Coding Region
|
ATGGTGAGAGCACCCGGCTTTAGACTTCAAGCCAAAAATATATTCCTCACTTACCCAAAATGCCCCCTATCTAAAGACACAGTCCTTGAGCTATTAAAGGGCATTCAATGCCCTTCTGATAAATTATTTATCCGAGTTGCTCAAGAGAAACACCAGGATGGGAGCCTGCACCTCCATGCTCTCATCCAATTCAAAGGTAAGTGCCAATTCACAAACCCCAGGCACTTCGACCTTACTCATCCCAACTCCTCTACACAATACCACCCCAATTTCCAATCAGCAAAGTCCTCTTCCGATGTCAAGGCCTACATTGAGAAGGACCAAGATTTTGTTGACAGTGGAGTCTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTCAGCAAACGGCTAACGATGCTTACGCCCAGGCATTAAATACTGGGTGTAAATCTGAAGCGTTACAGATAATAAAGGAATTGTGTCCAAAAGACTTTGTTCTTCAATTCCATAATATTAATAATAATTTAGATAGGATTTTTTCTCCTCCTCCTTCTGTATATTCTTCTCCTTTTTCTCTTTCTTCTTTCAATAATGTTCCTGACATTATCAGCGATTGGGCTGCTGAAAATGTCATGGATGCCGCTGCGCGGCCAGATAGGCCCATTAGTATTGTAATAGAAGGCCCAAGTAGAATAGGTAAAACAGTCTGGGCTAGATCTTTAGGACCACATAATTATCTGTGTGGTCATTTAGACTTAAGTCCAAAAGTATACAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAACCCCCAATACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGAAGGACTGGCAATCCAACTGTAAATACGGAAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAGGGCTCGTCATTTAAACTCTGGTTGGACAAACCAGAGCAGGGAGCACTCAAGATTTGGGCAACAGCAAACGCTTTATTCTGCGATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCCATTCAGGAGCCACTACACACAGAGGCGAAGAAGGCCAAGAGGAAAGTTCCTGA |
Protein Sequence
|
MVRAPGFRLQAKNIFLTYPKCPLSKDTVLELLKGIQCPSDKLFIRVAQEKHQDGSLHLHALIQFKGKCQFTNPRHFDLTHPNSSTQYHPNFQSAKSSSDVKAYIEKDQDFVDSGVFQVDGRSARGGQQTANDAYAQALNTGCKSEALQIIKELCPKDFVLQFHNINNNLDRIFSPPPSVYSSPFSLSSFNNVPDIISDWAAENVMDAAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKIWATANALFCDVQSPFWVQEEVSHSGATTHRGEEGQEESS |
NCBI Accession
|
YP_008198574.1
|
Location
|
2204-2461 |
Protein Name
|
AC4 |
Coding Region
|
ATGGGAGCCTGCACCTCCATGCTCTCATCCAATTCAAAGGTAAGTGCCAATTCACAAACCCCAGGCACTTCGACCTTACTCATCCCAACTCCTCTACACAATACCACCCCAATTTCCAATCAGCAAAGTCCTCTTCCGATGTCAAGGCCTACATTGAGAAGGACCAAGATTTTGTTGACAGTGGAGTCTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTCAGCAAACGGCTAACGATGCTTACGCCCAGGCATTAA |
Protein Sequence
|
MGACTSMLSSNSKVSANSQTPGTSTLLIPTPLHNTTPISNQQSPLPMSRPTLRRTKILLTVESSRSTEEVLEEVSKRLTMLTPRH |