Sweet potato leaf curl Henan virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000907875.1
Isolate China: Henan
Release date 2015/2/22
Submitter Liu,Q., Zhang,Z., Li,J., Qiao,Q., Qin,Y., Zhang,D., Tian,Y., Wang,S., Wang,Y., Liu,Q.L., Zhang,Z.C., Qin,Y.H., Zhang,D.S., Tian,Y.T., Wang,Y.J.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_021719
ACCGGTGCCCGCGCCCCCCTTTATTGTGGGCCCCACACGCTTTACTTTAATTATTTAAAGGCGTACCTGTTTCAGTCTTGGTCGCCAAGAATGGATTTATGGGACCCACTTCAGAACCCTCTCCCAGATACTTTATACGGTTTTCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAACCAGGAACTCTAGGGTTCGAGCTTTGTTCCGATCTCATTCGCATACTGCGCGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGTTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGGGATCGCATTCCGAAGGGGTGCGTAGGTCCTTGTAAGGTACAGGATTATGAATTCAAGATGGATGTCCCACATAGTGGCACCTTTGTGTGTGTTTCTGATTTTACAAGGGGTACTGGGCTTACACATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGATGGTAAGGTTTGGATGGACGACAACGTGGCCAAGAGGGACCATACAAACATCATTACTTACTGGTTGATCCGAGATAGAAGACCCAATAAGGATCCATTGACGTTTGCACAGGCCTTCACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTTCTGAAGAAATTCTCTGTTACTGTATCTGGTGGTCCTTATAACCACAAGGAGCAGGCTTTAGTTAGGAAGTTTTTTAAGGGATTGTATAATCATGTTACTTATAATCATAAGGAAGAGGCTAAATATGAGAATCATTTAGAGAATGCATTAATGTTGTATTCTGCTAGCAGCCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCATAATAATTAATAAAGAAGTACTTTTATATCATCTTTGCAATCTATTACATCGACTTCGTCTATCCATCTAACTGATTCAGGCAAATGCCTGATTACATAAACTAAATTAATAAGAGAAAAAAACCCTAAACTAGCTAAGCTATTACATATATGCCATTTAAGGCGTTGCAAAATACCAGTCCAATTGGGAATAGCACCAGTTAGACGGGTCGTCAAGATCCGGAATTGGAGGAAGATCTTGTGGAATCCCAGTTGTCTCCTTTCCCTGTAGTTGACCCTCAGCTGGAATTTGAGGATGGTTCTCCCCTGTGCGCTCTCGTGGACATACATCAGTCTGAGGTGGAATGGTGCAGTCCGACCCACAGACATGGGGTTGGTGTCGAATTCGACTGCTCTCGTAGTCTGAGCATGACTTAGTGATTCCCCTGTGCGTGAATCCATGCTGGTACTTGCAGGTTGTGGTGATGAAGGCTGAACAGCCGCAACCCTTCCACACTATCCTTGTCCTCTGTTCAGGAACTTTCCTCTTGGCCTTCTTCGCCTCTGTGTGTAGTGGCTCCTGAATGGGACACTTCCTCTTGTACCCAGAAAGGGGATTGGACATCGCAGAATAAAGCGTTTGCTGTTGCCCAAATCTTGAGTGCTCCCTGCTCTGGTTTGTCCAACCAGAGTTTAAATGACGAGCCCTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTATTTACAGTTGGATTGCCAGTCCTTCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTATTGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTGTATACTTTTGGACTTAAGTCTAAATGACCACACAGATAATTATGTGGTCCTAAAGATCTAGCCCAGACTGTTTTACCTATTCTACTTGGGCCTTCTATTACAATACTAATGGGCCTATCTGGCCGCGCAGCGGCATCCATGACATTTTCAGCAGCCCAATCGCTGATAATGTCAGGAACATTATTGAAAGAAGAAAGAGAAAAAGGAGAAGAATATACAGAAGGAGGAGGAGAAAAAATCCTATCTAAATTATTATTAATATTATGGAATTGAAGAACAAAGTCTTTTGGACACAATTCCTTTATTATCTGTAACGCTTCAGATTTACACCCAGTATTTAATGCCTGGGCGTAAGCATCGTTAGCCGTTTGCTGACCTCCTCTAGCACTTCTTCCGTCGACCTGGAAGACTCCACTGTCAACAAAATCTTGGTCCTTCTCAATGTAGGCCTTGACATCGGAAGAGGACTTTGCTGATTGGAAATTGGGGTGGTATTGTGTAGAGGAGTTGGGATGAGTAAGGTCGAAGTGCCTGGGGTTTGTGAATTGGCACTTACCTTTGAATTGGATGAGAGCATGGAGGTGCAGGCTCCCATCCTGGTGTTTCTCTTGAGCAACTCGGATAAATAATTTATCAGAAGGGCATTGAATGCCCTTTAATAGCTCAAGGACTGTGTCTTTAGATAGGGGGCATTTTGGGTAAGTGAGGAATATATTTTTGGCTTGAAGTCTAAAGCCGGGTGCTCTCACCATGTTGACTTGGTCAATTGGAGTAACACCTTCTTGCCATGCAATTGGAGTAATGGAGTAGAATATATAGTGGTTGGATTTTCAGACCTCCATTTTGAAATTCAAATTCCGACAACTTTGGGCCCACAAAAGCGGGCACCGTATTAATATT

Gene Information

NCBI Accession YP_008198569.1
Location 91-465
Protein Name AV2
Coding Region ATGGATTTATGGGACCCACTTCAGAACCCTCTCCCAGATACTTTATACGGTTTTCGTTGTATGCTTTCTGTAAAATACCTGCAAGGTATTTTGAAGAAATACGAACCAGGAACTCTAGGGTTCGAGCTTTGTTCCGATCTCATTCGCATACTGCGCGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGTTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGGGATCGCATTCCGAAGGGGTGCGTAGGTCCTTGTAA
Protein Sequence MDLWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCSDLIRILRVKQYGRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFSKRPDEEKEGGSHSEGVRRSL

NCBI Accession YP_008198570.1
Location 257-1021
Protein Name AV1
Coding Region ATGGTAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGTTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGGGATCGCATTCCGAAGGGGTGCGTAGGTCCTTGTAAGGTACAGGATTATGAATTCAAGATGGATGTCCCACATAGTGGCACCTTTGTGTGTGTTTCTGATTTTACAAGGGGTACTGGGCTTACACATCGTTTGGGTAAGAGGGTGTGTATTAAGTCCATGGGTATTGATGGTAAGGTTTGGATGGACGACAACGTGGCCAAGAGGGACCATACAAACATCATTACTTACTGGTTGATCCGAGATAGAAGACCCAATAAGGATCCATTGACGTTTGCACAGGCCTTCACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGTATGGATCTGAGAGATAGAATGCAGGTTCTGAAGAAATTCTCTGTTACTGTATCTGGTGGTCCTTATAACCACAAGGAGCAGGCTTTAGTTAGGAAGTTTTTTAAGGGATTGTATAATCATGTTACTTATAATCATAAGGAAGAGGCTAAATATGAGAATCATTTAGAGAATGCATTAATGTTGTATTCTGCTAGCAGCCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCATAATAATTAA
Protein Sequence MVGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYVPVSRSVQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGKRVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFAQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN

NCBI Accession YP_008198571.1
Location 1018-1452
Protein Name AC3
Coding Region ATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCACCTCAGACTGATGTATGTCCACGAGAGCGCACAGGGGAGAACCATCCTCAAATTCCAGCTGAGGGTCAACTACAGGGAAAGGAGACAACTGGGATTCCACAAGATCTTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCCCAATTGGACTGGTATTTTGCAACGCCTTAAATGGCATATATGTAATAGCTTAGCTAGTTTAGGGTTTTTTTCTCTTATTAATTTAGTTTATGTAATCAGGCATTTGCCTGAATCAGTTAGATGGATAGACGAAGTCGATGTAATAGATTGCAAAGATGATATAAAAGTACTTCTTTATTAA
Protein Sequence MDSRTGESLSHAQTTRAVEFDTNPMSVGRTAPFHLRLMYVHESAQGRTILKFQLRVNYRERRQLGFHKIFLQFRILTTRLTGAIPNWTGILQRLKWHICNSLASLGFFSLINLVYVIRHLPESVRWIDEVDVIDCKDDIKVLLY

NCBI Accession YP_008198572.1
Location 1169-1615
Protein Name AC2
Coding Region ATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCCATTCAGGAGCCACTACACACAGAGGCGAAGAAGGCCAAGAGGAAAGTTCCTGAACAGAGGACAAGGATAGTGTGGAAGGGTTGCGGCTGTTCAGCCTTCATCACCACAACCTGCAAGTACCAGCATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCACCTCAGACTGATGTATGTCCACGAGAGCGCACAGGGGAGAACCATCCTCAAATTCCAGCTGAGGGTCAACTACAGGGAAAGGAGACAACTGGGATTCCACAAGATCTTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCCCAATTGGACTGGTATTTTGCAACGCCTTAA
Protein Sequence MSNPLSGYKRKCPIQEPLHTEAKKAKRKVPEQRTRIVWKGCGCSAFITTTCKYQHGFTHRGITKSCSDYESSRIRHQPHVCGSDCTIPPQTDVCPRERTGENHPQIPAEGQLQGKETTGIPQDLPPIPDLDDPSNWCYSQLDWYFATP

NCBI Accession YP_008198573.1
Location 1524-2618
Protein Name AC1
Coding Region ATGGTGAGAGCACCCGGCTTTAGACTTCAAGCCAAAAATATATTCCTCACTTACCCAAAATGCCCCCTATCTAAAGACACAGTCCTTGAGCTATTAAAGGGCATTCAATGCCCTTCTGATAAATTATTTATCCGAGTTGCTCAAGAGAAACACCAGGATGGGAGCCTGCACCTCCATGCTCTCATCCAATTCAAAGGTAAGTGCCAATTCACAAACCCCAGGCACTTCGACCTTACTCATCCCAACTCCTCTACACAATACCACCCCAATTTCCAATCAGCAAAGTCCTCTTCCGATGTCAAGGCCTACATTGAGAAGGACCAAGATTTTGTTGACAGTGGAGTCTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTCAGCAAACGGCTAACGATGCTTACGCCCAGGCATTAAATACTGGGTGTAAATCTGAAGCGTTACAGATAATAAAGGAATTGTGTCCAAAAGACTTTGTTCTTCAATTCCATAATATTAATAATAATTTAGATAGGATTTTTTCTCCTCCTCCTTCTGTATATTCTTCTCCTTTTTCTCTTTCTTCTTTCAATAATGTTCCTGACATTATCAGCGATTGGGCTGCTGAAAATGTCATGGATGCCGCTGCGCGGCCAGATAGGCCCATTAGTATTGTAATAGAAGGCCCAAGTAGAATAGGTAAAACAGTCTGGGCTAGATCTTTAGGACCACATAATTATCTGTGTGGTCATTTAGACTTAAGTCCAAAAGTATACAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAACCCCCAATACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGAAGGACTGGCAATCCAACTGTAAATACGGAAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAGGGCTCGTCATTTAAACTCTGGTTGGACAAACCAGAGCAGGGAGCACTCAAGATTTGGGCAACAGCAAACGCTTTATTCTGCGATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCCATTCAGGAGCCACTACACACAGAGGCGAAGAAGGCCAAGAGGAAAGTTCCTGA
Protein Sequence MVRAPGFRLQAKNIFLTYPKCPLSKDTVLELLKGIQCPSDKLFIRVAQEKHQDGSLHLHALIQFKGKCQFTNPRHFDLTHPNSSTQYHPNFQSAKSSSDVKAYIEKDQDFVDSGVFQVDGRSARGGQQTANDAYAQALNTGCKSEALQIIKELCPKDFVLQFHNINNNLDRIFSPPPSVYSSPFSLSSFNNVPDIISDWAAENVMDAAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKIWATANALFCDVQSPFWVQEEVSHSGATTHRGEEGQEESS

NCBI Accession YP_008198574.1
Location 2204-2461
Protein Name AC4
Coding Region ATGGGAGCCTGCACCTCCATGCTCTCATCCAATTCAAAGGTAAGTGCCAATTCACAAACCCCAGGCACTTCGACCTTACTCATCCCAACTCCTCTACACAATACCACCCCAATTTCCAATCAGCAAAGTCCTCTTCCGATGTCAAGGCCTACATTGAGAAGGACCAAGATTTTGTTGACAGTGGAGTCTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTCAGCAAACGGCTAACGATGCTTACGCCCAGGCATTAA
Protein Sequence MGACTSMLSSNSKVSANSQTPGTSTLLIPTPLHNTTPISNQQSPLPMSRPTLRRTKILLTVESSRSTEEVLEEVSKRLTMLTPRH