Sweet potato leaf curl China virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002823565.1
Isolate China
Release date 2018/8/25
Submitter Luan,Y.S., Zhang,J., Liu,D.M., Li,W.L., Luan,Y.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038464
TAAAATTGTTCTTTCATTAATAGAGTAATGTTTTTACATCGTCTTTACAATCGTTTACATCTACTTCTTCTACCCACAAGAACTTGTGGGGTAAATTCCTAATTACATAAACTAAGTTATACAATGATAAATAACCTAAACTACTTAACTCATTACAAATTCGCCATTTAAGGCGTGTCAAAATACCAGTCCAACTGTGAATAACACCAGTCAGACGGGTTGTAATTATCCTGAATTGGAGAAAGATCTTGTGGAATCCCAGTTGCTTCCTCTCCCTGTGGTTCACTTGCAGCTGGAACTTGAGGATTGTTCTCCCCGCTACGCTCTGGTGGGCGTATAAACACTTGAGGTAGAACGGAGCAGTCCGACCCACAGACATGGGATTGTCGAAGAATTCGACTGCTCTCATAGTCTGTGCATGACTTAGTGATTCCCCAGTGCGTGAATCCATTCTGGTATTTGCACTGAGGAGTTATGAAAGCGGAACAGCCGCACTGCTTCCACACTATCCTTGTCCTTTGCTCTGGTATGCGGTGTTTTTTTTTAGCCGCTGCGTGAATTGGTTCCTGAATTGGCGCCTTCCTCTTGTCTCCAGAATGGGCTTCTGACATTACAGAATATGGTGTTCTTGCAAGCCCACTGTCTCAGTGCGTCTTGTTCTGGCTTATCTAGCCAGGATTTAAATGAGGATCCTTCGCCTGGATTGCAGAGGAAGATAGTGGATATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATTGCCAGTCTCTTTGGGCCCCAATGAATTCTTTGGGGGTCGACGTCATCAATGACGTTGTACCAAGCACTATTACTGTACACTCTTGGACTCAGATCCAAGTGCCCACACAAATAATTGTGTGGCCCAAGAGACCTAGCCCAAACTGTTTTACCTATCCTACTTGGGCCTTCTATAACTATACTAATGGGCCTATCTGGCCGCGCAGCGGCATCCATGATGTTATCAGCAGCCCAATTGCTGATAATATCAGGTACATTATTAAAAGAAGAAGAAGAAAAAGGAGAAGAATATACAGCAGGAGGAGGAGAAAAAATCCTATCTAAATTACCAACTAAATTATGATATTGAAAAATAAATTTTTCTGGGAGTTTCCCCCTTATTATTTGTAATGCAGCCTCCTTGCTGCCGGAATTTAAGGCCTCTGCTGCCGCGTCATTAGCAGTCTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAATTCACCCCAGTTGAGAGTATCCCCGTCCTTCTCGACGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGGATGTTGGGGTGAAAATGAGATGACCTGTATGGTGATACCAGGTCGAAGAATCTGCTATTTGTGCAGACGAATTTGCCTTCGAACTGCACCAGCATGTGGAGATGAGGTTCCCCATCCTCGTGAAGTTCTCTGGCTATGTGGATATATTTTTTGTTTGTGGGTGTGTTTATTTTCAGTATTTGCTCTAAAGCATCTTCTTTAGAGAGAGAACATCGTGGATAAGTAATAAAATAATTTTTAGAAGAAACTCTAAACCGTTTAGGAGCTGCCATCTGTATTGGTGACAATCCAAACTTGCTGAATGAATTGGTGACTGGTGACAATTTATACTATGTCACCAAATGGCATTATGGTAATTTGAACAACTTTAATTTGAATTCGAAAATGCTATTGGTCCGCCAAAAAGCGGGCACCGTATTAATATTACCGGTGCCCGCGCCTCCCTTTTAATGTGGACCCCACACGCTTTACTTTAATTATTAAAGACGTGCCTGTTGCAGACTTGGTCGCCAAGAATGGATTTGTGGGACCCGCTTCAGAACCCTCTCCCAGATACCTTATACGGTTTTCGGTGTATGCTTTCTGTAAAATACCTGCAAAGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGCTCTGATCTCATCCGCATACTGCGTGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCTCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGTGATCGCATCCCAAAGGGATGTGTGGGTCCCTGTAAGGTACAGGACTATGAGTTCAAGATGGATGTCCCGCACAGTGGTACCTTTGTATGTGTGTCTGATTTCACTAGGGGAACTGGGCTTACCCATCGATTGGGTAAGAGGGTGTGTGTTAAGTCCATGGGCATTGATGGTAAGGTCTGGATGGACGACAATGTCGCCAAACGAGACCACACCAACATCATCACTTACTGGTTGATCCGTGATAGGAGGCCCAATAAGGATCCATTAACGTTTAGTCAGGCCTTTACTATGTATGATAATGAGCCCACTACAGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAGGTATTGAAGAAATTCTCTGTAACTGTTTCTGGTGGGCCTTATAACCACAAGGAACAGGCATTAGTTAGGAAGTTTTTTAAGGGTTTGTATAACCATGTTACGTACAACCATAAGGAGGAAGCTAAGTATGAAAATCATTTAGAGAATGCTTTGATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTATATCAGACTCTGCGTTGTAGGGCTTATTTTTATGATTCACACAATAATTAA

Gene Information

NCBI Accession YP_009506495.1
Location 17-451
Protein Name AC3
Coding Region ATGGATTCACGCACTGGGGAATCACTAAGTCATGCACAGACTATGAGAGCAGTCGAATTCTTCGACAATCCCATGTCTGTGGGTCGGACTGCTCCGTTCTACCTCAAGTGTTTATACGCCCACCAGAGCGTAGCGGGGAGAACAATCCTCAAGTTCCAGCTGCAAGTGAACCACAGGGAGAGGAAGCAACTGGGATTCCACAAGATCTTTCTCCAATTCAGGATAATTACAACCCGTCTGACTGGTGTTATTCACAGTTGGACTGGTATTTTGACACGCCTTAAATGGCGAATTTGTAATGAGTTAAGTAGTTTAGGTTATTTATCATTGTATAACTTAGTTTATGTAATTAGGAATTTACCCCACAAGTTCTTGTGGGTAGAAGAAGTAGATGTAAACGATTGTAAAGACGATGTAAAAACATTACTCTATTAA
Protein Sequence MDSRTGESLSHAQTMRAVEFFDNPMSVGRTAPFYLKCLYAHQSVAGRTILKFQLQVNHRERKQLGFHKIFLQFRIITTRLTGVIHSWTGILTRLKWRICNELSSLGYLSLYNLVYVIRNLPHKFLWVEEVDVNDCKDDVKTLLY

NCBI Accession YP_009506496.1
Location 168-611
Protein Name AC2
Coding Region ATGTCAGAAGCCCATTCTGGAGACAAGAGGAAGGCGCCAATTCAGGAACCAATTCACGCAGCGGCTAAAAAAAAACACCGCATACCAGAGCAAAGGACAAGGATAGTGTGGAAGCAGTGCGGCTGTTCCGCTTTCATAACTCCTCAGTGCAAATACCAGAATGGATTCACGCACTGGGGAATCACTAAGTCATGCACAGACTATGAGAGCAGTCGAATTCTTCGACAATCCCATGTCTGTGGGTCGGACTGCTCCGTTCTACCTCAAGTGTTTATACGCCCACCAGAGCGTAGCGGGGAGAACAATCCTCAAGTTCCAGCTGCAAGTGAACCACAGGGAGAGGAAGCAACTGGGATTCCACAAGATCTTTCTCCAATTCAGGATAATTACAACCCGTCTGACTGGTGTTATTCACAGTTGGACTGGTATTTTGACACGCCTTAA
Protein Sequence MSEAHSGDKRKAPIQEPIHAAAKKKHRIPEQRTRIVWKQCGCSAFITPQCKYQNGFTHWGITKSCTDYESSRILRQSHVCGSDCSVLPQVFIRPPERSGENNPQVPAASEPQGEEATGIPQDLSPIQDNYNPSDWCYSQLDWYFDTP

NCBI Accession YP_009506497.1
Location 734-1597
Protein Name AC1
Coding Region ATGGCAGCTCCTAAACGGTTTAGAGTTTCTTCTAAAAATTATTTTATTACTTATCCACGATGTTCTCTCTCTAAAGAAGATGCTTTAGAGCAAATACTGAAAATAAACACACCCACAAACAAAAAATATATCCACATAGCCAGAGAACTTCACGAGGATGGGGAACCTCATCTCCACATGCTGGTGCAGTTCGAAGGCAAATTCGTCTGCACAAATAGCAGATTCTTCGACCTGGTATCACCATACAGGTCATCTCATTTTCACCCCAACATCCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACGTCGAGAAGGACGGGGATACTCTCAACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAATGACGCGGCAGCAGAGGCCTTAAATTCCGGCAGCAAGGAGGCTGCATTACAAATAATAAGGGGGAAACTCCCAGAAAAATTTATTTTTCAATATCATAATTTAGTTGGTAATTTAGATAGGATTTTTTCTCCTCCTCCTGCTGTATATTCTTCTCCTTTTTCTTCTTCTTCTTTTAATAATGTACCTGATATTATCAGCAATTGGGCTGCTGATAACATCATGGATGCCGCTGCGCGGCCAGATAGGCCCATTAGTATAGTTATAGAAGGCCCAAGTAGGATAGGTAAAACAGTTTGGGCTAGGTCTCTTGGGCCACACAATTATTTGTGTGGGCACTTGGATCTGAGTCCAAGAGTGTACAGTAATAGTGCTTGGTACAACGTCATTGATGACGTCGACCCCCAAAGAATTCATTGGGGCCCAAAGAGACTGGCAATCAAACACAAAGTACGGGAAGCCAGTTCAAATTAA
Protein Sequence MAAPKRFRVSSKNYFITYPRCSLSKEDALEQILKINTPTNKKYIHIARELHEDGEPHLHMLVQFEGKFVCTNSRFFDLVSPYRSSHFHPNIQGAKSSSDVKSYVEKDGDTLNWGEFQIDGRSARGGQQTANDAAAEALNSGSKEAALQIIRGKLPEKFIFQYHNLVGNLDRIFSPPPAVYSSPFSSSSFNNVPDIISNWAADNIMDAAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPRVYSNSAWYNVIDDVDPQRIHWGPKRLAIKHKVREASSN

NCBI Accession YP_009506498.1
Location 1183-1440
Protein Name AC4
Coding Region ATGGGGAACCTCATCTCCACATGCTGGTGCAGTTCGAAGGCAAATTCGTCTGCACAAATAGCAGATTCTTCGACCTGGTATCACCATACAGGTCATCTCATTTTCACCCCAACATCCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACGTCGAGAAGGACGGGGATACTCTCAACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAATGACGCGGCAGCAGAGGCCTTAA
Protein Sequence MGNLISTCWCSSKANSSAQIADSSTWYHHTGHLIFTPTSRELNPAPMSSPTSRRTGILSTGVNSRSTADLLEEVSRLLMTRQQRP

NCBI Accession YP_009506499.1
Location 1841-2182
Protein Name AV2
Coding Region ATGGATTTGTGGGACCCGCTTCAGAACCCTCTCCCAGATACCTTATACGGTTTTCGGTGTATGCTTTCTGTAAAATACCTGCAAAGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGCTCTGATCTCATCCGCATACTGCGTGTCAAGCAGTATGGTAGGGCGAATTCCCGTTTCTCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGTGA
Protein Sequence MDLWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYEPGTLGFELCSDLIRILRVKQYGRANSRFSEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFSKRPDEEKEG

NCBI Accession YP_009506500.1
Location 2007-2771
Protein Name AV1
Coding Region ATGGTAGGGCGAATTCCCGTTTCTCGGAGATTTCATCCCTATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCTCGAAGCGTCCAGATGAAGAGAAGGAAGGGTGATCGCATCCCAAAGGGATGTGTGGGTCCCTGTAAGGTACAGGACTATGAGTTCAAGATGGATGTCCCGCACAGTGGTACCTTTGTATGTGTGTCTGATTTCACTAGGGGAACTGGGCTTACCCATCGATTGGGTAAGAGGGTGTGTGTTAAGTCCATGGGCATTGATGGTAAGGTCTGGATGGACGACAATGTCGCCAAACGAGACCACACCAACATCATCACTTACTGGTTGATCCGTGATAGGAGGCCCAATAAGGATCCATTAACGTTTAGTCAGGCCTTTACTATGTATGATAATGAGCCCACTACAGCTAAGATCCGAATGGATCTGAGAGATAGAATGCAGGTATTGAAGAAATTCTCTGTAACTGTTTCTGGTGGGCCTTATAACCACAAGGAACAGGCATTAGTTAGGAAGTTTTTTAAGGGTTTGTATAACCATGTTACGTACAACCATAAGGAGGAAGCTAAGTATGAAAATCATTTAGAGAATGCTTTGATGTTGTATTCTGCTAGCAGTCATGCTAGCAATCCTGTATATCAGACTCTGCGTTGTAGGGCTTATTTTTATGATTCACACAATAATTAA
Protein Sequence MVGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYVPVSRSVQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGKRVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFSQAFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN