Sweet potato leaf curl Canary virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000884435.1
Isolate Spain
Release date 2015/2/22
Submitter Lozano,G., Trenado,H.P., Valverde,R.A., Navas-Castillo,J.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_013465
ACCGGTGCCCGCCGCGCCCCCTTTTGTGGGCCCCACAAAGAATGATGACATTGCTTTATAAGGACCAATCAGGTTGCCGTGCTTGGCGCCCAAGTATGGCTGAAATGTGGGACCCTCTTCAGAACCCACTACCAGATACTTTATACGGTTTCAGGTGTATGCTTTCCGTTAAATACCTACAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGACCGCATCCCTAAGGGATGTGTTGGTCCCTGTAAGATCCAGGACTATGAGTTCAAAATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGTACAGGGCTTACCCATCGCCTGGGTAAGCGTGTTTGTATTAAGTCCATGGGTATAGATGGGAAGGTATGGATGGATGACAATGTGGCTAAGAGAGATCACACCAATATCATCACGTATTGGTTGATTCGTGATAGAAGGCCCAATAAGGATCCGCTGAACTTTGGCCAGATCTTCACTATGTACGACAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGGGATAGAATGCAAGTCTTGAAGAAGTTCTCTGTTACAGTTTCAGGAGGTCCATACAGCCACAAGGAACAGGCATTAATTAGGAAGTTTTTTAAGGGTTTGTATAATCATGTTACTTATAATCATAAGGAAGAAGCTAAGTATGAGAATCAGTTAGAGAATGCTTTGATGTTGTATAGTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTCTATGATTCGCACAATAATTAATAAACTTTTATTTTATTAATACATTAATACCTTTACATCATCATTGCAGTCTACATTATCTATTTCATCTATCCAAGAACATACTCTTGGAAGATATCTAATAACAAAAACTAAATTAACTAAACTAAAAAAACCCAAATTTGCTATTTCATTACATATGCGCCATTTAAGGCGTTCCAAAATACCAGTCCAACTGTGAATAGCACCAGTTAGACGGGTCGTCAAGATCCGGAATTGGAGGAATATCTTGTGGAATCCCAGTTGCCTCCTTTCCCTGTAGTTGACTCTCAGCTGGAATTTGAGGATGGTTCTCCCCTGTGTGCTCTCGTGGACATACATAATTCTGAGATGGAATGGTGCAGTCCGACCCACAGACATGGGGTTGGTGTCGAATTCGACTGCTCTCGTAGTCTGAGCATGACTTAGTGATTCCCCTGTGCGTGAATCCATGCTGGTACTTGCAGGTTGTGGTGATGAAGGCTGAACAGCCGCAACCCTTCCACACTATCCTTGTCCTTGGTTCAGGAGCTTTCCTCTTGGCCTTCTTCGCTGCTGCGTGTGATGGCTCCTGCTCCGGACACTTCCTCTTGTACCCAGAAAGGGGATTGGACATCGCAGAATATTGCGTTCTTTAATGCCCAATTCTTTAGAGCTTCTTGTTCTGGTTTATCTAACCAGAGTTTAAATGAAGAGCCCTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTCCCGTATTTACAGTTTGATTGCCAGTCCTTCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTATTGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTGTATACTTTTGGGCTTAGATCTAAATGCCCACACAAATAATTGTGAGGGCCCAAAGACCTGGCCCACACTGTTTTGCCTATTCTGCTTGGGCCTTCAATAACAATTGATATAGGTCTATCCGGCCGCGCAGCGGAATCCATGACATTTTCAGCGGCCCAATCGCTGATAATGTCAGGAACATTATTGAAAGAAGAAGAAGAAAAAGGGGAACAATATACAGCAGGAGGAGGAGAAAAAATCCTATCTAAATTTGAAACTAAATTATGATATTGAAAAATATATTTTTCAGGGAGTTTCTCCCTTATTATTTGTAACGCAGCTTCTTTAGAACCTGCGTTTAATGCCTCTGCGGCAGCGTCGTTAGCAGTCTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAATTCACCCCAGTCGAGGTAGTCTCCGTCCTTCTCGATGTATGACTTGACATCCGAGGAGGACTTAGCTGCCTGGAAATTTGGATGGAATTGGGAGGAGTTATGTGGATGATGTAGGTCGAAATGTCGTGGGTTTTTGAACTCTGCTTTCCCCTTGAACTGGATGAGAACATGGAGATGCAATGACCCATCTTGGTGTTTCTCTTGGCTAACTCTGATAAACAGTTTATCCGACGGGCAATGGGTGGCCCTTAATTGCTCAAGCGCTTGCTCTTTAGATAAAGAACATTTGGGGTATGTTAAGAAAATATTTTTGGCTTGGACTCTAAACCCTTGCTTACGTGGCATTTTGAATCGGAGGCTCTCAAAGCTCTACGGAATTGGAGGATTTGGAGGACTATATATAGTGAGCCTCCAAATGACATTTTGGTAATTTAGAAGATCCTTTTACCTTTAATTCAAATTCCGACATGTCTGGGACCACCAAAAGGCGGGCACCGTATTAATATT

Gene Information

NCBI Accession YP_003288769.1
Location 42-440
Gene Name V2
Protein Name MP
Coding Region ATGATGACATTGCTTTATAAGGACCAATCAGGTTGCCGTGCTTGGCGCCCAAGTATGGCTGAAATGTGGGACCCTCTTCAGAACCCACTACCAGATACTTTATACGGTTTCAGGTGTATGCTTTCCGTTAAATACCTACAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGA
Protein Sequence MMTLLYKDQSGCRAWRPSMAEMWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCSELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRPDEEKEG

NCBI Accession YP_003288770.1
Location 265-1029
Gene Name V1
Protein Name CP
Coding Region ATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGACCGCATCCCTAAGGGATGTGTTGGTCCCTGTAAGATCCAGGACTATGAGTTCAAAATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGTACAGGGCTTACCCATCGCCTGGGTAAGCGTGTTTGTATTAAGTCCATGGGTATAGATGGGAAGGTATGGATGGATGACAATGTGGCTAAGAGAGATCACACCAATATCATCACGTATTGGTTGATTCGTGATAGAAGGCCCAATAAGGATCCGCTGAACTTTGGCCAGATCTTCACTATGTACGACAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGGGATAGAATGCAAGTCTTGAAGAAGTTCTCTGTTACAGTTTCAGGAGGTCCATACAGCCACAAGGAACAGGCATTAATTAGGAAGTTTTTTAAGGGTTTGTATAATCATGTTACTTATAATCATAAGGAAGAAGCTAAGTATGAGAATCAGTTAGAGAATGCTTTGATGTTGTATAGTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTCTATGATTCGCACAATAATTAA
Protein Sequence MTGRIRVSPRYHPYGGRQVRRRLNFETAIVPYTGNAVPIAARSYVPVSRGVRMKRRRGDRIPKGCVGPCKIQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGKRVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN

NCBI Accession YP_003288771.1
Location 1045-1479
Gene Name C3
Protein Name C3
Coding Region ATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCATCTCAGAATTATGTATGTCCACGAGAGCACACAGGGGAGAACCATCCTCAAATTCCAGCTGAGAGTCAACTACAGGGAAAGGAGGCAACTGGGATTCCACAAGATATTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCACAGTTGGACTGGTATTTTGGAACGCCTTAAATGGCGCATATGTAATGAAATAGCAAATTTGGGTTTTTTTAGTTTAGTTAATTTAGTTTTTGTTATTAGATATCTTCCAAGAGTATGTTCTTGGATAGATGAAATAGATAATGTAGACTGCAATGATGATGTAAAGGTATTAATGTATTAA
Protein Sequence MDSRTGESLSHAQTTRAVEFDTNPMSVGRTAPFHLRIMYVHESTQGRTILKFQLRVNYRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNEIANLGFFSLVNLVFVIRYLPRVCSWIDEIDNVDCNDDVKVLMY

NCBI Accession YP_003288772.1
Location 1196-1642
Gene Name C2
Protein Name C2
Coding Region ATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCGGAGCAGGAGCCATCACACGCAGCAGCGAAGAAGGCCAAGAGGAAAGCTCCTGAACCAAGGACAAGGATAGTGTGGAAGGGTTGCGGCTGTTCAGCCTTCATCACCACAACCTGCAAGTACCAGCATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCATCTCAGAATTATGTATGTCCACGAGAGCACACAGGGGAGAACCATCCTCAAATTCCAGCTGAGAGTCAACTACAGGGAAAGGAGGCAACTGGGATTCCACAAGATATTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCACAGTTGGACTGGTATTTTGGAACGCCTTAA
Protein Sequence MSNPLSGYKRKCPEQEPSHAAAKKAKRKAPEPRTRIVWKGCGCSAFITTTCKYQHGFTHRGITKSCSDYESSRIRHQPHVCGSDCTIPSQNYVCPREHTGENHPQIPAESQLQGKEATGIPQDIPPIPDLDDPSNWCYSQLDWYFGTP

NCBI Accession YP_003288773.1
Location 1551-2645
Gene Name C1
Protein Name REP
Coding Region ATGCCACGTAAGCAAGGGTTTAGAGTCCAAGCCAAAAATATTTTCTTAACATACCCCAAATGTTCTTTATCTAAAGAGCAAGCGCTTGAGCAATTAAGGGCCACCCATTGCCCGTCGGATAAACTGTTTATCAGAGTTAGCCAAGAGAAACACCAAGATGGGTCATTGCATCTCCATGTTCTCATCCAGTTCAAGGGGAAAGCAGAGTTCAAAAACCCACGACATTTCGACCTACATCATCCACATAACTCCTCCCAATTCCATCCAAATTTCCAGGCAGCTAAGTCCTCCTCGGATGTCAAGTCATACATCGAGAAGGACGGAGACTACCTCGACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAACGACGCTGCCGCAGAGGCATTAAACGCAGGTTCTAAAGAAGCTGCGTTACAAATAATAAGGGAGAAACTCCCTGAAAAATATATTTTTCAATATCATAATTTAGTTTCAAATTTAGATAGGATTTTTTCTCCTCCTCCTGCTGTATATTGTTCCCCTTTTTCTTCTTCTTCTTTCAATAATGTTCCTGACATTATCAGCGATTGGGCCGCTGAAAATGTCATGGATTCCGCTGCGCGGCCGGATAGACCTATATCAATTGTTATTGAAGGCCCAAGCAGAATAGGCAAAACAGTGTGGGCCAGGTCTTTGGGCCCTCACAATTATTTGTGTGGGCATTTAGATCTAAGCCCAAAAGTATACAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAACCCCCAATACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGAAGGACTGGCAATCAAACTGTAAATACGGGAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAGGGCTCTTCATTTAAACTCTGGTTAGATAAACCAGAACAAGAAGCTCTAAAGAATTGGGCATTAAAGAACGCAATATTCTGCGATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCGGAGCAGGAGCCATCACACGCAGCAGCGAAGAAGGCCAAGAGGAAAGCTCCTGA
Protein Sequence MPRKQGFRVQAKNIFLTYPKCSLSKEQALEQLRATHCPSDKLFIRVSQEKHQDGSLHLHVLIQFKGKAEFKNPRHFDLHHPHNSSQFHPNFQAAKSSSDVKSYIEKDGDYLDWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYIFQYHNLVSNLDRIFSPPPAVYCSPFSSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQEALKNWALKNAIFCDVQSPFWVQEEVSGAGAITRSSEEGQEESS

NCBI Accession YP_003288774.1
Location 2231-2488
Gene Name C4
Protein Name C4
Coding Region ATGGGTCATTGCATCTCCATGTTCTCATCCAGTTCAAGGGGAAAGCAGAGTTCAAAAACCCACGACATTTCGACCTACATCATCCACATAACTCCTCCCAATTCCATCCAAATTTCCAGGCAGCTAAGTCCTCCTCGGATGTCAAGTCATACATCGAGAAGGACGGAGACTACCTCGACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAACGACGCTGCCGCAGAGGCATTAA
Protein Sequence MGHCISMFSSSSRGKQSSKTHDISTYIIHITPPNSIQISRQLSPPRMSSHTSRRTETTSTGVNSRSTADLLEEVSRLLTTLPQRH