Sweet potato leaf curl Canary virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000884435.1 |
Isolate |
Spain |
Release date |
2015/2/22 |
Submitter |
Lozano,G., Trenado,H.P., Valverde,R.A., Navas-Castillo,J. |
Host |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGTGCCCGCCGCGCCCCCTTTTGTGGGCCCCACAAAGAATGATGACATTGCTTTATAAGGACCAATCAGGTTGCCGTGCTTGGCGCCCAAGTATGGCTGAAATGTGGGACCCTCTTCAGAACCCACTACCAGATACTTTATACGGTTTCAGGTGTATGCTTTCCGTTAAATACCTACAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGACCGCATCCCTAAGGGATGTGTTGGTCCCTGTAAGATCCAGGACTATGAGTTCAAAATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGTACAGGGCTTACCCATCGCCTGGGTAAGCGTGTTTGTATTAAGTCCATGGGTATAGATGGGAAGGTATGGATGGATGACAATGTGGCTAAGAGAGATCACACCAATATCATCACGTATTGGTTGATTCGTGATAGAAGGCCCAATAAGGATCCGCTGAACTTTGGCCAGATCTTCACTATGTACGACAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGGGATAGAATGCAAGTCTTGAAGAAGTTCTCTGTTACAGTTTCAGGAGGTCCATACAGCCACAAGGAACAGGCATTAATTAGGAAGTTTTTTAAGGGTTTGTATAATCATGTTACTTATAATCATAAGGAAGAAGCTAAGTATGAGAATCAGTTAGAGAATGCTTTGATGTTGTATAGTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTCTATGATTCGCACAATAATTAATAAACTTTTATTTTATTAATACATTAATACCTTTACATCATCATTGCAGTCTACATTATCTATTTCATCTATCCAAGAACATACTCTTGGAAGATATCTAATAACAAAAACTAAATTAACTAAACTAAAAAAACCCAAATTTGCTATTTCATTACATATGCGCCATTTAAGGCGTTCCAAAATACCAGTCCAACTGTGAATAGCACCAGTTAGACGGGTCGTCAAGATCCGGAATTGGAGGAATATCTTGTGGAATCCCAGTTGCCTCCTTTCCCTGTAGTTGACTCTCAGCTGGAATTTGAGGATGGTTCTCCCCTGTGTGCTCTCGTGGACATACATAATTCTGAGATGGAATGGTGCAGTCCGACCCACAGACATGGGGTTGGTGTCGAATTCGACTGCTCTCGTAGTCTGAGCATGACTTAGTGATTCCCCTGTGCGTGAATCCATGCTGGTACTTGCAGGTTGTGGTGATGAAGGCTGAACAGCCGCAACCCTTCCACACTATCCTTGTCCTTGGTTCAGGAGCTTTCCTCTTGGCCTTCTTCGCTGCTGCGTGTGATGGCTCCTGCTCCGGACACTTCCTCTTGTACCCAGAAAGGGGATTGGACATCGCAGAATATTGCGTTCTTTAATGCCCAATTCTTTAGAGCTTCTTGTTCTGGTTTATCTAACCAGAGTTTAAATGAAGAGCCCTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTCCCGTATTTACAGTTTGATTGCCAGTCCTTCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTATTGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTGTATACTTTTGGGCTTAGATCTAAATGCCCACACAAATAATTGTGAGGGCCCAAAGACCTGGCCCACACTGTTTTGCCTATTCTGCTTGGGCCTTCAATAACAATTGATATAGGTCTATCCGGCCGCGCAGCGGAATCCATGACATTTTCAGCGGCCCAATCGCTGATAATGTCAGGAACATTATTGAAAGAAGAAGAAGAAAAAGGGGAACAATATACAGCAGGAGGAGGAGAAAAAATCCTATCTAAATTTGAAACTAAATTATGATATTGAAAAATATATTTTTCAGGGAGTTTCTCCCTTATTATTTGTAACGCAGCTTCTTTAGAACCTGCGTTTAATGCCTCTGCGGCAGCGTCGTTAGCAGTCTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAATTCACCCCAGTCGAGGTAGTCTCCGTCCTTCTCGATGTATGACTTGACATCCGAGGAGGACTTAGCTGCCTGGAAATTTGGATGGAATTGGGAGGAGTTATGTGGATGATGTAGGTCGAAATGTCGTGGGTTTTTGAACTCTGCTTTCCCCTTGAACTGGATGAGAACATGGAGATGCAATGACCCATCTTGGTGTTTCTCTTGGCTAACTCTGATAAACAGTTTATCCGACGGGCAATGGGTGGCCCTTAATTGCTCAAGCGCTTGCTCTTTAGATAAAGAACATTTGGGGTATGTTAAGAAAATATTTTTGGCTTGGACTCTAAACCCTTGCTTACGTGGCATTTTGAATCGGAGGCTCTCAAAGCTCTACGGAATTGGAGGATTTGGAGGACTATATATAGTGAGCCTCCAAATGACATTTTGGTAATTTAGAAGATCCTTTTACCTTTAATTCAAATTCCGACATGTCTGGGACCACCAAAAGGCGGGCACCGTATTAATATT
Gene Information
NCBI Accession
|
YP_003288769.1
|
Location
|
42-440 |
Gene Name
|
V2 |
Protein Name
|
MP |
Coding Region
|
ATGATGACATTGCTTTATAAGGACCAATCAGGTTGCCGTGCTTGGCGCCCAAGTATGGCTGAAATGTGGGACCCTCTTCAGAACCCACTACCAGATACTTTATACGGTTTCAGGTGTATGCTTTCCGTTAAATACCTACAAGGTATTTTGAAGAAATACGAGCCAGGAACCCTAGGGTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGA |
Protein Sequence
|
MMTLLYKDQSGCRAWRPSMAEMWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCSELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRPDEEKEG |
NCBI Accession
|
YP_003288770.1
|
Location
|
265-1029 |
Gene Name
|
V1 |
Protein Name
|
CP |
Coding Region
|
ATGACAGGGCGAATTCGCGTTTCGCCGAGATATCATCCCTATGGGGGGAGACAGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCTTACACTGGGAATGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAGGAGGGGTGACCGCATCCCTAAGGGATGTGTTGGTCCCTGTAAGATCCAGGACTATGAGTTCAAAATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACAAGGGGTACAGGGCTTACCCATCGCCTGGGTAAGCGTGTTTGTATTAAGTCCATGGGTATAGATGGGAAGGTATGGATGGATGACAATGTGGCTAAGAGAGATCACACCAATATCATCACGTATTGGTTGATTCGTGATAGAAGGCCCAATAAGGATCCGCTGAACTTTGGCCAGATCTTCACTATGTACGACAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGGGATAGAATGCAAGTCTTGAAGAAGTTCTCTGTTACAGTTTCAGGAGGTCCATACAGCCACAAGGAACAGGCATTAATTAGGAAGTTTTTTAAGGGTTTGTATAATCATGTTACTTATAATCATAAGGAAGAAGCTAAGTATGAGAATCAGTTAGAGAATGCTTTGATGTTGTATAGTGCTAGCAGTCATGCTAGCAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTCTATGATTCGCACAATAATTAA |
Protein Sequence
|
MTGRIRVSPRYHPYGGRQVRRRLNFETAIVPYTGNAVPIAARSYVPVSRGVRMKRRRGDRIPKGCVGPCKIQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGKRVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN |
NCBI Accession
|
YP_003288771.1
|
Location
|
1045-1479 |
Gene Name
|
C3 |
Protein Name
|
C3 |
Coding Region
|
ATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCATCTCAGAATTATGTATGTCCACGAGAGCACACAGGGGAGAACCATCCTCAAATTCCAGCTGAGAGTCAACTACAGGGAAAGGAGGCAACTGGGATTCCACAAGATATTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCACAGTTGGACTGGTATTTTGGAACGCCTTAAATGGCGCATATGTAATGAAATAGCAAATTTGGGTTTTTTTAGTTTAGTTAATTTAGTTTTTGTTATTAGATATCTTCCAAGAGTATGTTCTTGGATAGATGAAATAGATAATGTAGACTGCAATGATGATGTAAAGGTATTAATGTATTAA |
Protein Sequence
|
MDSRTGESLSHAQTTRAVEFDTNPMSVGRTAPFHLRIMYVHESTQGRTILKFQLRVNYRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNEIANLGFFSLVNLVFVIRYLPRVCSWIDEIDNVDCNDDVKVLMY |
NCBI Accession
|
YP_003288772.1
|
Location
|
1196-1642 |
Gene Name
|
C2 |
Protein Name
|
C2 |
Coding Region
|
ATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCGGAGCAGGAGCCATCACACGCAGCAGCGAAGAAGGCCAAGAGGAAAGCTCCTGAACCAAGGACAAGGATAGTGTGGAAGGGTTGCGGCTGTTCAGCCTTCATCACCACAACCTGCAAGTACCAGCATGGATTCACGCACAGGGGAATCACTAAGTCATGCTCAGACTACGAGAGCAGTCGAATTCGACACCAACCCCATGTCTGTGGGTCGGACTGCACCATTCCATCTCAGAATTATGTATGTCCACGAGAGCACACAGGGGAGAACCATCCTCAAATTCCAGCTGAGAGTCAACTACAGGGAAAGGAGGCAACTGGGATTCCACAAGATATTCCTCCAATTCCGGATCTTGACGACCCGTCTAACTGGTGCTATTCACAGTTGGACTGGTATTTTGGAACGCCTTAA |
Protein Sequence
|
MSNPLSGYKRKCPEQEPSHAAAKKAKRKAPEPRTRIVWKGCGCSAFITTTCKYQHGFTHRGITKSCSDYESSRIRHQPHVCGSDCTIPSQNYVCPREHTGENHPQIPAESQLQGKEATGIPQDIPPIPDLDDPSNWCYSQLDWYFGTP |
NCBI Accession
|
YP_003288773.1
|
Location
|
1551-2645 |
Gene Name
|
C1 |
Protein Name
|
REP |
Coding Region
|
ATGCCACGTAAGCAAGGGTTTAGAGTCCAAGCCAAAAATATTTTCTTAACATACCCCAAATGTTCTTTATCTAAAGAGCAAGCGCTTGAGCAATTAAGGGCCACCCATTGCCCGTCGGATAAACTGTTTATCAGAGTTAGCCAAGAGAAACACCAAGATGGGTCATTGCATCTCCATGTTCTCATCCAGTTCAAGGGGAAAGCAGAGTTCAAAAACCCACGACATTTCGACCTACATCATCCACATAACTCCTCCCAATTCCATCCAAATTTCCAGGCAGCTAAGTCCTCCTCGGATGTCAAGTCATACATCGAGAAGGACGGAGACTACCTCGACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAACGACGCTGCCGCAGAGGCATTAAACGCAGGTTCTAAAGAAGCTGCGTTACAAATAATAAGGGAGAAACTCCCTGAAAAATATATTTTTCAATATCATAATTTAGTTTCAAATTTAGATAGGATTTTTTCTCCTCCTCCTGCTGTATATTGTTCCCCTTTTTCTTCTTCTTCTTTCAATAATGTTCCTGACATTATCAGCGATTGGGCCGCTGAAAATGTCATGGATTCCGCTGCGCGGCCGGATAGACCTATATCAATTGTTATTGAAGGCCCAAGCAGAATAGGCAAAACAGTGTGGGCCAGGTCTTTGGGCCCTCACAATTATTTGTGTGGGCATTTAGATCTAAGCCCAAAAGTATACAGCAACAGTGCTTGGTATAACGTCATTGATGACGTCAACCCCCAATACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGAAGGACTGGCAATCAAACTGTAAATACGGGAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAGGGCTCTTCATTTAAACTCTGGTTAGATAAACCAGAACAAGAAGCTCTAAAGAATTGGGCATTAAAGAACGCAATATTCTGCGATGTCCAATCCCCTTTCTGGGTACAAGAGGAAGTGTCCGGAGCAGGAGCCATCACACGCAGCAGCGAAGAAGGCCAAGAGGAAAGCTCCTGA |
Protein Sequence
|
MPRKQGFRVQAKNIFLTYPKCSLSKEQALEQLRATHCPSDKLFIRVSQEKHQDGSLHLHVLIQFKGKAEFKNPRHFDLHHPHNSSQFHPNFQAAKSSSDVKSYIEKDGDYLDWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYIFQYHNLVSNLDRIFSPPPAVYCSPFSSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQEALKNWALKNAIFCDVQSPFWVQEEVSGAGAITRSSEEGQEESS |
NCBI Accession
|
YP_003288774.1
|
Location
|
2231-2488 |
Gene Name
|
C4 |
Protein Name
|
C4 |
Coding Region
|
ATGGGTCATTGCATCTCCATGTTCTCATCCAGTTCAAGGGGAAAGCAGAGTTCAAAAACCCACGACATTTCGACCTACATCATCCACATAACTCCTCCCAATTCCATCCAAATTTCCAGGCAGCTAAGTCCTCCTCGGATGTCAAGTCATACATCGAGAAGGACGGAGACTACCTCGACTGGGGTGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACTGCTAACGACGCTGCCGCAGAGGCATTAA |
Protein Sequence
|
MGHCISMFSSSSRGKQSSKTHDISTYIIHITPPNSIQISRQLSPPRMSSHTSRRTETTSTGVNSRSTADLLEEVSRLLTTLPQRH |