Sweet potato golden vein Korea virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_003029275.1
Isolate South Korea
Release date 2019/6/28
Submitter Kim,J., Kwak,H.-R., Kim,M.-K., Seo,J.-K., Kim,C.-S., Lee,G.-S., Choi,H.-S.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_043433
ACCGGTGCCCGCCGCGCCCTTTAAAAGTGGGCCCCACTAGGGAACCACGCGTCTTTTCCGTACTGTCCTTTAATGATTACTTTGCTTTATAAGGACCAATCAGGTTTCCGTGCTTGGGCGCCAAGAATGGAGCAGTTGTGGGACCCTTTGCAGAACCCACTCCCGGATACTTTATACGGTTTTAGGTGTATGCTATCCGTAAAATACTTGCAGAGTATTTGAAGAAATACGAGCCAGGAACCCTTAGGGTTTCGAGCTCTGTTCGGAGTTAATCCGTATATTCAGGGTCAGGCAGTATGACAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCATATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAGTGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAAGAGGGGTGACCGCATCCCGAAGGGATGTGTTGGTCCCTGTAAGGTCCAGGACTATGAGTTCAAGATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACTAGGGGAACTGGGCTTACCCATCGCCTGGGTAAGCGTGTTTGTGTGAAGTCAATGGGTATAGATGGGAAGGTCTGGATGGATGACAATGTGGCCAAGAGAGATCACACCAATATCATCACGTATTGGTTGATTCGTGACAGAAGGCCCAATAAGGATCCGCTGAACTTTGGCCAAGTCTTCACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGGGATAGAATGCAGGTATTGAAGAAGTTCTCTGTTACAGTTTCAGGAGGCCCATACAGTCACAAGGAGCAGGCCTTAGTTAGGAAGTTTTTTAAGGGTTTGTATAACCATGTAACTTACAATCACAAGGAAGAAGCTAAATATGAGAACCATTTAGAAAATGCATTAATGTTGTATTCTGCTAGCAGTCATGCTAGTAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCATAATAATTAATAAAGAAGCATTTTTATATCATCTGTGCAATCATTTACATCGATTTCATCTACCCATTTACATGTTTTTCGGTAGATTATCTATTACAAAATATAAATTATTTAAACTAAAAAAACCTAAGCTATCTAAATCATTACAAATACGCCATCTAAGGCGAGTTAAAATACCAATCCAACTGTGAGTAGCACCAGTCAGACGGGTTGAAATTATCCGAAACTGCAGGAATATCTTGTGAAAGCCCAGCTGCTTCCTTTCCCTGTAGTTCACCTGAAGTTGGAACTTCAGGATTGTTCTCTTCGATACGCTCTGGTGGGCGTATAAAAATTTGAGGTGAAACGGGAGGCTTGTCTTGTTCCCGGAAGAATTGTTGAACTCGATAGCTCTCATAATCTGTGCAGGACTTAGTAACTCCCCTGTGCGTGAATCCATTCTGGTACTTACATTCGTTTGTTATGAATGCAGAGCAGCCACAGCCCTTCCACACGAGCCTAGTCCTGGGCTCTGGTGCTTTCCTCTTCTTCTTCGCCGCTGCGTGTGCTGGTTCCTGCTCCGGACACTTCCTCTTGAATCCAGAAGGGGTTGTCGACATCACAGAAAACTGCGTTCTTAATAGCCCAGTTCTTAAGTGCTTCTTGTTCTGGCTTGTCCAGCCAGAATTTAAATGAAGACCCCTCTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTATTTACAATTGCTTTGCCAGTCCTTCTGGGCCCCCATGAACTCTTTAAAGTGCTTTAGGTATTGGGGGTTTACGTCATCAATGACGTTATACCAAGCACTATTACTATATACCTTTGGACTCAAGTCCAAATGTCCACACAGATAATTATGTGGGCCTAAAGACCGAGCCCAAACTGTTTTACCTATCCTACTTGGGCCTTCTATAACAATACTAATGGGCCTATCTGGCCGCGCAGCGGCATCCATGATGTTATCAGCTGCCCAGTCGCTGATAATGTCAGGTACATTATTGAAAGAAGAAACAGAAAAAGGAGAAGAATATACAGAAGGAGGGGGAGAAAAAATCCTATCTAAATTACTACGTAAATTATGGTATTGAAAAATAAAATCTTTAGGGAGTTTCTCCCTAATTATTTGTAAAGCTGCTTCAGCAGATCCTGCGTTTAAGGCCTCTGCGGCAGCGTCGTTAGCATTCTGCTGACCTCCTCTAGCAGACCTGCCGTCGACCTGGAATTCACCCCAGTCGATGAAATCTCCGTCCTTCTCAATGTATGACTTGACATCTGAAGAGGACTTTGCTGCCTGGAAATTTGGATGGAATTGGGAGGAGTTGTGTGGATGTTGTAGGTCGAAATGTCGTGGGTTTTTGAATTCTGCTTTCCCCCTGAACTGGATGAGAACATGGAGATGCAGAGCCCCATCTTGGTGTTTCTCCTGACTAACTCTGATAAATAGTTTATCAGAAGGACAATTAATTGCCCTTAGTTGTTCAAGAGCTTGCTCTTTAGAGAGAGAGCATTGGGGATAAGTTAAGAAAATGTTTTTAGCTTGGACTCTAAAACCTGGCTTACGTGGCATTTTGAATCGGAGGCTCTCAAAGCTCTACGGAATTGGAGGATTTGGAGGTCCATATATAGTGAGCCTCTAAATGGCATTTTGGTAATTTGAACACCTTTAATTTGAATGCTGAAATCCTATTGGTCCTTCGTAAAGCGGGCACCGTATTAATATT

Gene Information

NCBI Accession YP_009666107.1
Location 127-222
Protein Name truncated V2
Coding Region ATGGAGCAGTTGTGGGACCCTTTGCAGAACCCACTCCCGGATACTTTATACGGTTTTAGGTGTATGCTATCCGTAAAATACTTGCAGAGTATTTGA
Protein Sequence MEQLWDPLQNPLPDTLYGFRCMLSVKYLQSI

NCBI Accession YP_009666108.1
Location 297-1061
Protein Name V1
Coding Region ATGACAGGGCGAATTCCCGTTTCGCGGAGATTTCATCCATATGGGGGGAGACCGGTAAGACGGAGGCTGAACTTCGAGACAGCTATCGTGCCCTACACTGGGAGTGCTGTCCCAATTGCTGCCCGAAGCTATGTCCCGGTTTCAAGAGGCGTCCGGATGAAGAGAAAGAGGGGTGACCGCATCCCGAAGGGATGTGTTGGTCCCTGTAAGGTCCAGGACTATGAGTTCAAGATGGACGTTCCCCACACGGGAACGTTTGTCTGTGTCTCGGATTTTACTAGGGGAACTGGGCTTACCCATCGCCTGGGTAAGCGTGTTTGTGTGAAGTCAATGGGTATAGATGGGAAGGTCTGGATGGATGACAATGTGGCCAAGAGAGATCACACCAATATCATCACGTATTGGTTGATTCGTGACAGAAGGCCCAATAAGGATCCGCTGAACTTTGGCCAAGTCTTCACTATGTATGACAATGAGCCCACTACTGCTAAGATCCGAATGGATCTGAGGGATAGAATGCAGGTATTGAAGAAGTTCTCTGTTACAGTTTCAGGAGGCCCATACAGTCACAAGGAGCAGGCCTTAGTTAGGAAGTTTTTTAAGGGTTTGTATAACCATGTAACTTACAATCACAAGGAAGAAGCTAAATATGAGAACCATTTAGAAAATGCATTAATGTTGTATTCTGCTAGCAGTCATGCTAGTAATCCTGTGTATCAGACCCTGCGTTGCAGGGCTTATTTTTATGATTCGCATAATAATTAA
Protein Sequence MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGSAVPIAARSYVPVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGKRVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQVFTMYDNEPTTAKIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLENALMLYSASSHASNPVYQTLRCRAYFYDSHNN

NCBI Accession YP_009666109.1
Location 1119-1490
Protein Name C3
Coding Region ATGGATTCACGCACAGGGGAGTTACTAAGTCCTGCACAGATTATGAGAGCTATCGAGTTCAACAATTCTTCCGGGAACAAGACAAGCCTCCCGTTTCACCTCAAATTTTTATACGCCCACCAGAGCGTATCGAAGAGAACAATCCTGAAGTTCCAACTTCAGGTGAACTACAGGGAAAGGAAGCAGCTGGGCTTTCACAAGATATTCCTGCAGTTTCGGATAATTTCAACCCGTCTGACTGGTGCTACTCACAGTTGGATTGGTATTTTAACTCGCCTTAGATGGCGTATTTGTAATGATTTAGATAGCTTAGGTTTTTTTAGTTTAAATAATTTATATTTTGTAATAGATAATCTACCGAAAAACATGTAA
Protein Sequence MDSRTGELLSPAQIMRAIEFNNSSGNKTSLPFHLKFLYAHQSVSKRTILKFQLQVNYRERKQLGFHKIFLQFRIISTRLTGATHSWIGILTRLRWRICNDLDSLGFFSLNNLYFVIDNLPKNM

NCBI Accession YP_009666110.1
Location 1210-1650
Protein Name C2
Coding Region ATGTCGACAACCCCTTCTGGATTCAAGAGGAAGTGTCCGGAGCAGGAACCAGCACACGCAGCGGCGAAGAAGAAGAGGAAAGCACCAGAGCCCAGGACTAGGCTCGTGTGGAAGGGCTGTGGCTGCTCTGCATTCATAACAAACGAATGTAAGTACCAGAATGGATTCACGCACAGGGGAGTTACTAAGTCCTGCACAGATTATGAGAGCTATCGAGTTCAACAATTCTTCCGGGAACAAGACAAGCCTCCCGTTTCACCTCAAATTTTTATACGCCCACCAGAGCGTATCGAAGAGAACAATCCTGAAGTTCCAACTTCAGGTGAACTACAGGGAAAGGAAGCAGCTGGGCTTTCACAAGATATTCCTGCAGTTTCGGATAATTTCAACCCGTCTGACTGGTGCTACTCACAGTTGGATTGGTATTTTAACTCGCCTTAG
Protein Sequence MSTTPSGFKRKCPEQEPAHAAAKKKRKAPEPRTRLVWKGCGCSAFITNECKYQNGFTHRGVTKSCTDYESYRVQQFFREQDKPPVSPQIFIRPPERIEENNPEVPTSGELQGKEAAGLSQDIPAVSDNFNPSDWCYSQLDWYFNSP

NCBI Accession YP_009666111.1
Location 1550-2653
Protein Name C1
Coding Region ATGCCACGTAAGCCAGGTTTTAGAGTCCAAGCTAAAAACATTTTCTTAACTTATCCCCAATGCTCTCTCTCTAAAGAGCAAGCTCTTGAACAACTAAGGGCAATTAATTGTCCTTCTGATAAACTATTTATCAGAGTTAGTCAGGAGAAACACCAAGATGGGGCTCTGCATCTCCATGTTCTCATCCAGTTCAGGGGGAAAGCAGAATTCAAAAACCCACGACATTTCGACCTACAACATCCACACAACTCCTCCCAATTCCATCCAAATTTCCAGGCAGCAAAGTCCTCTTCAGATGTCAAGTCATACATTGAGAAGGACGGAGATTTCATCGACTGGGGTGAATTCCAGGTCGACGGCAGGTCTGCTAGAGGAGGTCAGCAGAATGCTAACGACGCTGCCGCAGAGGCCTTAAACGCAGGATCTGCTGAAGCAGCTTTACAAATAATTAGGGAGAAACTCCCTAAAGATTTTATTTTTCAATACCATAATTTACGTAGTAATTTAGATAGGATTTTTTCTCCCCCTCCTTCTGTATATTCTTCTCCTTTTTCTGTTTCTTCTTTCAATAATGTACCTGACATTATCAGCGACTGGGCAGCTGATAACATCATGGATGCCGCTGCGCGGCCAGATAGGCCCATTAGTATTGTTATAGAAGGCCCAAGTAGGATAGGTAAAACAGTTTGGGCTCGGTCTTTAGGCCCACATAATTATCTGTGTGGACATTTGGACTTGAGTCCAAAGGTATATAGTAATAGTGCTTGGTATAACGTCATTGATGACGTAAACCCCCAATACCTAAAGCACTTTAAAGAGTTCATGGGGGCCCAGAAGGACTGGCAAAGCAATTGTAAATACGGAAAGCCAGTTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGAGAGGGGTCTTCATTTAAATTCTGGCTGGACAAGCCAGAACAAGAAGCACTTAAGAACTGGGCTATTAAGAACGCAGTTTTCTGTGATGTCGACAACCCCTTCTGGATTCAAGAGGAAGTGTCCGGAGCAGGAACCAGCACACGCAGCGGCGAAGAAGAAGAGGAAAGCACCAGAGCCCAGGACTAG
Protein Sequence MPRKPGFRVQAKNIFLTYPQCSLSKEQALEQLRAINCPSDKLFIRVSQEKHQDGALHLHVLIQFRGKAEFKNPRHFDLQHPHNSSQFHPNFQAAKSSSDVKSYIEKDGDFIDWGEFQVDGRSARGGQQNANDAAAEALNAGSAEAALQIIREKLPKDFIFQYHNLRSNLDRIFSPPPSVYSSPFSVSSFNNVPDIISDWAADNIMDAAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKFWLDKPEQEALKNWAIKNAVFCDVDNPFWIQEEVSGAGTSTRSGEEEEESTRAQD

NCBI Accession YP_009666112.1
Location 2239-2496
Protein Name C4
Coding Region ATGGGGCTCTGCATCTCCATGTTCTCATCCAGTTCAGGGGGAAAGCAGAATTCAAAAACCCACGACATTTCGACCTACAACATCCACACAACTCCTCCCAATTCCATCCAAATTTCCAGGCAGCAAAGTCCTCTTCAGATGTCAAGTCATACATTGAGAAGGACGGAGATTTCATCGACTGGGGTGAATTCCAGGTCGACGGCAGGTCTGCTAGAGGAGGTCAGCAGAATGCTAACGACGCTGCCGCAGAGGCCTTAA
Protein Sequence MGLCISMFSSSSGGKQNSKTHDISTYNIHTTPPNSIQISRQQSPLQMSSHTLRRTEISSTGVNSRSTAGLLEEVSRMLTTLPQRP