Bean white chlorosis mosaic virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000910695.1 |
Isolate |
Venezuela |
Release date |
2015/2/22 |
Submitter |
Fiallo-Olive,E., Marquez-Martin,B., Hassan,I., Chirinos,D.T., Geraud-Pouey,F., Navas-Castillo,J., Moriones,E., Chirinos,D. |
Host |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTCTGCCCCTCCGCTTTAATTCGAATTAAAGCGTGCTGCTTTCGTTTCGTCCAATGATATTGCGTCTGACGAGCTTAGATATTTGCAACAACTTGGGCGCTAAGTTGTTGGGTCAAGATTATAAATTAAAGCAGCACGGCCCACTGCCTTTAACTCAAAATGCCTAAGCGCGATCTCCCATGGCGCGCAATGCCTGGAACATCAAAGGTTAGTCGCAATGCTAACTACTCTCCACGTGCAGGTGGTGGCTCGAAATTGAGTAGGGCCTCTGAGTGGGTTAACAGGCCCATGTATATGAAGCCCAGGATTTATCGGACGCTGAGGACTCCAGATGTGCCCAGAGGCTGTGAAGGTCCTTGTAAGGTCCAGTCATATGAACAGCGTCACGATATTTCACATGTCGGGAAGGTCATGTGTATCTCTGATGTCACACGTGGCAATGGCATCACCCACCGTGTGGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTTGGTAAGATCTGGATGGATGAGAATATCAAGCTGAAGAACCACACCAACAGCGTTATGTTCTGGCTGGTCAGGGACCGTAGACCGTATGGAACGCCCATGGATTTCGGTCAGGTATTCAACATGTTCGACAACGAGCCCAGCACTGCCACGGTCAAGAACGATCTCCGTGATCGTTATCAAGTTATGCACAAGTTCTATGGTAAGGTGACAGGTGGACAGTATGCAAGTAACGAGCAGGCAATCGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTCTACAATCATCAAGAGGCTGGCAAGTATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTTTATGCAACGCTTAAGATTCGAATCTATTTTTATGATTCGATTATGAATTAATAAATTTTGAATTTTATTGAATGATCTTCCACGACATAATTTACATACGATCTGTCTGTTGCGAAACGAACAGCCCTAATTACGTTGTTAATGGAAATAACACCCAATCGATCTAAGTACATATGAACTAAACGCTTAAATCTATTCAAATAAGTCGACCCAGAAGCTGTCAGGGATATCGTCCAGACTTGGAAGTTCAGGTAGGCTTTGTGGAGATCCAATGCTTTCCTGAGGTTGTGGTTGAACCGTATTTGCACGCTGTATATCCTGGTGTTCGTGAAGAGTGGGTCCTCTACCTTGTATAGTTTGAAATAAAGGGGATTTTCTATCTCCCAGATATACACGCCATTCTCCGCCTGAGGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGTCCTGTGCAGCCTATGTGGAAGTATATGGAGCAACCGCACTCCAGATCAATGCGGCGTCGTCTGACTGACCTCTTCTTGGCCTCCCTGTGTTTCTTCTTGATAGAGGGGGGAGTCGAGGGTGATGAAGACCGCATTCTTCAGGGTCCAGTTCCTGATGCCTGTGTTTTCCTCTTTGTTGAGGAAATCTTTATAACTGGCACCCTCACCAGGATTGCAAAGCACGATTGATGGGATCCCTCCTTTAATGACAACTGGCTTGCCGTACTTGCAATTTGACTGCCATTTCTTTTGGGCCCAAAAAAGTTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACATCATCAATGACGTTATACTCCACTTCGTCCGAGTACACTCTGGAATTGAAGTCTAGGTGTCCACTAAGATAATTATGTGGGCCTAATGATCGAGCCCACATCGTCTTTCCTGTTCTTGAATCACCTTCGACTATGAGACTTAATGGTCTTTCTGGCCGCGCAGCGGGACTCTTTCCAAAATAATCATCTGCCCATTCTTGCATCTCGTCGGGAACGTTAGTGAAAGAGGAGAGTGGAAACGGAGGAGTCCATGGCTCCGGAGGCTTTTGGAATATTCTGGTTGCGTTAGCAACCAGGTTGTGATGTTGAAGGAAGAAATGTTGCGGTTGTTCTTCCTTTATTATTTGCAGAGCTGCCTCTGCTGATCCTGCATTTAACGCTTTAGCATATGTGTCGTTAGCAGATTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAACTGTCCCCATTCAACTGTATCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTTGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGAGACCAGATCGAAGAATCTGTTATTCGTGCACTGGTATTTTCCTTCGAACTGGATGAGCACATGTAGATGAGGTTGCCCATCTTCGTGAAATTCTCTGCAGATCTTGATGAATTTCTTGTTAACAGGAGTTGCTAGGTTTTGTATTTGGGAAAGTGCCTCTTCTTTGGTAAGAGAGCACTGGGGATAAGTGAGGAAATAGTTCTTGGATTGAACTCTAAATTTCTTAGGCGGTGGCATTTTAGTAATAAGAAGGGGTACTCCAGTTGAGCTCCCTCAAAACTTGCTCATGCAATTGGAGTATTGGAGTACTATATATACTATAACTCTCAATCTCGGTTTTGGAACACGTGGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
YP_008400122.1
|
Location
|
181-936 |
Gene Name
|
AV1 |
Protein Name
|
coat protein |
Coding Region
|
ATGCCTAAGCGCGATCTCCCATGGCGCGCAATGCCTGGAACATCAAAGGTTAGTCGCAATGCTAACTACTCTCCACGTGCAGGTGGTGGCTCGAAATTGAGTAGGGCCTCTGAGTGGGTTAACAGGCCCATGTATATGAAGCCCAGGATTTATCGGACGCTGAGGACTCCAGATGTGCCCAGAGGCTGTGAAGGTCCTTGTAAGGTCCAGTCATATGAACAGCGTCACGATATTTCACATGTCGGGAAGGTCATGTGTATCTCTGATGTCACACGTGGCAATGGCATCACCCACCGTGTGGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTTGGTAAGATCTGGATGGATGAGAATATCAAGCTGAAGAACCACACCAACAGCGTTATGTTCTGGCTGGTCAGGGACCGTAGACCGTATGGAACGCCCATGGATTTCGGTCAGGTATTCAACATGTTCGACAACGAGCCCAGCACTGCCACGGTCAAGAACGATCTCCGTGATCGTTATCAAGTTATGCACAAGTTCTATGGTAAGGTGACAGGTGGACAGTATGCAAGTAACGAGCAGGCAATCGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTCTACAATCATCAAGAGGCTGGCAAGTATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTTTATGCAACGCTTAAGATTCGAATCTATTTTTATGATTCGATTATGAATTAA |
Protein Sequence
|
MPKRDLPWRAMPGTSKVSRNANYSPRAGGGSKLSRASEWVNRPMYMKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
NCBI Accession
|
YP_008400123.1
|
Location
|
933-1331 |
Gene Name
|
AC3 |
Protein Name
|
replication enhancement protein |
Coding Region
|
ATGGATTCACGCACAGGGGAACTCATCACTGCACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTTTATTTCAAACTATACAAGGTAGAGGACCCACTCTTCACGAACACCAGGATATACAGCGTGCAAATACGGTTCAACCACAACCTCAGGAAAGCATTGGATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGATATCCCTGACAGCTTCTGGGTCGACTTATTTGAATAGATTTAAGCGTTTAGTTCATATGTACTTAGATCGATTGGGTGTTATTTCCATTAACAACGTAATTAGGGCTGTTCGTTTCGCAACAGACAGATCGTATGTAAATTATGTCGTGGAAGATCATTCAATAAAATTCAAAATTTATTAA |
Protein Sequence
|
MDSRTGELITAPQAENGVYIWEIENPLYFKLYKVEDPLFTNTRIYSVQIRFNHNLRKALDLHKAYLNFQVWTISLTASGSTYLNRFKRLVHMYLDRLGVISINNVIRAVRFATDRSYVNYVVEDHSIKFKIY |
NCBI Accession
|
YP_008400124.1
|
Location
|
1078-1467 |
Gene Name
|
AC2 |
Protein Name
|
transactivator protein |
Coding Region
|
ATGCGGTCTTCATCACCCTCGACTCCCCCCTCTATCAAGAAGAAACACAGGGAGGCCAAGAAGAGGTCAGTCAGACGACGCCGCATTGATCTGGAGTGCGGTTGCTCCATATACTTCCACATAGGCTGCACAGGACATGGATTCACGCACAGGGGAACTCATCACTGCACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTTTATTTCAAACTATACAAGGTAGAGGACCCACTCTTCACGAACACCAGGATATACAGCGTGCAAATACGGTTCAACCACAACCTCAGGAAAGCATTGGATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGATATCCCTGACAGCTTCTGGGTCGACTTATTTGAATAG |
Protein Sequence
|
MRSSSPSTPPSIKKKHREAKKRSVRRRRIDLECGCSIYFHIGCTGHGFTHRGTHHCTSGGEWRVYLGDRKSPLFQTIQGRGPTLHEHQDIQRANTVQPQPQESIGSPQSLPELPSLDDIPDSFWVDLFE |
NCBI Accession
|
YP_008400125.1
|
Location
|
1379-2464 |
Gene Name
|
AC1 |
Protein Name
|
replication associated protein |
Coding Region
|
ATGCCACCGCCTAAGAAATTTAGAGTTCAATCCAAGAACTATTTCCTCACTTATCCCCAGTGCTCTCTTACCAAAGAAGAGGCACTTTCCCAAATACAAAACCTAGCAACTCCTGTTAACAAGAAATTCATCAAGATCTGCAGAGAATTTCACGAAGATGGGCAACCTCATCTACATGTGCTCATCCAGTTCGAAGGAAAATACCAGTGCACGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACAGTTGAATGGGGACAGTTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCTAACGACACATATGCTAAAGCGTTAAATGCAGGATCAGCAGAGGCAGCTCTGCAAATAATAAAGGAAGAACAACCGCAACATTTCTTCCTTCAACATCACAACCTGGTTGCTAACGCAACCAGAATATTCCAAAAGCCTCCGGAGCCATGGACTCCTCCGTTTCCACTCTCCTCTTTCACTAACGTTCCCGACGAGATGCAAGAATGGGCAGATGATTATTTTGGAAAGAGTCCCGCTGCGCGGCCAGAAAGACCATTAAGTCTCATAGTCGAAGGTGATTCAAGAACAGGAAAGACGATGTGGGCTCGATCATTAGGCCCACATAATTATCTTAGTGGACACCTAGACTTCAATTCCAGAGTGTACTCGGACGAAGTGGAGTATAACGTCATTGATGATGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAACTTTTTTGGGCCCAAAAGAAATGGCAGTCAAATTGCAAGTACGGCAAGCCAGTTGTCATTAAAGGAGGGATCCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTGCCAGTTATAAAGATTTCCTCAACAAAGAGGAAAACACAGGCATCAGGAACTGGACCCTGAAGAATGCGGTCTTCATCACCCTCGACTCCCCCCTCTATCAAGAAGAAACACAGGGAGGCCAAGAAGAGGTCAGTCAGACGACGCCGCATTGA |
Protein Sequence
|
MPPPKKFRVQSKNYFLTYPQCSLTKEEALSQIQNLATPVNKKFIKICREFHEDGQPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTVEWGQFQIDGRSARGGQQSANDTYAKALNAGSAEAALQIIKEEQPQHFFLQHHNLVANATRIFQKPPEPWTPPFPLSSFTNVPDEMQEWADDYFGKSPAARPERPLSLIVEGDSRTGKTMWARSLGPHNYLSGHLDFNSRVYSDEVEYNVIDDVAPHYLKLKHWKELFWAQKKWQSNCKYGKPVVIKGGIPSIVLCNPGEGASYKDFLNKEENTGIRNWTLKNAVFITLDSPLYQEETQGGQEEVSQTTPH |
NCBI Accession
|
YP_008400126.1
|
Location
|
2050-2307 |
Gene Name
|
AC4 |
Protein Name
|
AC4 protein |
Coding Region
|
ATGGGCAACCTCATCTACATGTGCTCATCCAGTTCGAAGGAAAATACCAGTGCACGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACAGTTGAATGGGGACAGTTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCTAACGACACATATGCTAAAGCGTTAA |
Protein Sequence
|
MGNLIYMCSSSSKENTSARITDSSIWSPQPGQHISIRTYRELNQAPTSSPTSTRTEIQLNGDSSRSTADLLEEVSNLLTTHMLKR |