Siegesbeckia yellow vein virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000867465.1
Isolate China:Guangdong province
Release date 2015/2/13
Submitter Wu,J.B., Zhou,X.P., Cai,J.H., Wu,J.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_008236
ACCGGATGGCCGCCGATTTTTTTAAAGTGGGCCCCCAAAAAAATGATCTAGACCGTTGCTCAAAGCTAACTAAAAAATATCCACGTATGCTTTTGTATATTTAAATGTATTTCCTTTTGATTTATATATGAAAATGTGGGATCCTTTAATTAACGAATTCCCTGAGACCGTTCACGGTTTTAGATGTATGCTTGCAATAAAATATCTGCAAGCCGTTCAATTGACGTACTCCCCTGATACGGTAGGATACGATTTAATTCGTGAACTTATACGTATTTTACGTACTAAGGATTATGGCCAAGCGACCTGCAGATATAGTCATTTCCACTCCCGCCTCCAAGGTACGTCGGAGGTTGAACTTCGACAGCCCCTATCGCAGCAGTGCTGCTGCCCCAACTGTCCTTGTCACCAACAAAAGGAGGACATGGGTCAATCGGCCCATGTACAGAAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGTTGTGAAGGTCCATGTAAGGTTCAGTCGTTTGAACAGCGTCACGATGTAGTCCATGTAGGTAAAGTAATATGCGTGTCTGATGTTACCCGTGGTAATGGGTTGACTCACCGTGTGGGTAAGAGGTTCTGTATTAAATCTGTATACGTTTTGGGTAAAATCTGGATGGATGAAAATATTAAGACCAAGAATCACACTAATACGGTCATGTTCTACCTAGTCCGTGATAGAAGACCCTTTGGTACTCCTCAGGATTTTGGACAAGTTTTTAACATGTATGATAATGAACCTAGTACTGCAACTGTGAAGAATGACAACAGAGATCGATTTCAAGTACTTAGAAGATTTCAGTCTACCGTTACTGGTGGCCAGTATGCATCTAAGGAGCAAGCCATAGTTAGGAAATTTATGAAGATTAACAACCACGTTACTTACAACCATCAGGAAGCTGCGAAGTACGATAACCATACAGAGAACGCCTTGTTATTGTATATGGCATGTACTCATGCCAGTAACCCTGTGTATGCTACTTTGAAAATCAGGATCTATTTTTACGATTCTGTTCAGAATTAATAAATATTGAATTTTATATCATGAAATTCCTGTACATACATTGTGTGTTGTAGTTTATTATATAATACATGATCTACTGCTCTAATTACATTATTAATAGATATTACACCTAAATTATCTAAATACTGCATGACTTGCTTCTTAAATACTCTCAAGAAACGCCATGTCTGAGGCTGTAAGCGAGTCCAGACTTCGAAAATCAGAAAGCATTTGTGAATTCCCAGTTGAGTTCTCAGGTTGTAGTTGAATTGAATCTGGACGGTAATCTTGTCTTGTTCTTTGTTGAATGGCCTGCTGAGGTGATCTGTTATCTTGAAATATAGGGGATTTGGCACCGTCCAGATATACACGCCATTCTTTGCCTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATCGTTGGCACAGTGTATTCCTATGTATATTGTGCAACCACAGTCTAGGTCAACCCTACGTCTCCTGGTCACTTTCTTCCTCTTGGCTAGCTTGTGCTGGACTTTGATTGGTATTGGAGTAGAGTGGCTCGTTGAGGGTGATGAAGGTTGCATTTTTTATTGCCCAGGCTTTTAATGCACTATTCTTTTCTTCATCAAGATATTCTATATAGGAGGCAGTTGGTCCTGGATTGCAAAGGAAGATTGTTGGGATTCCACCTTTAATTTGAATTGGCTTCCCATACTTTGTGTTGCTTTGCCAGTCTCGTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGATAGTGCGGGTCTACGTCATCAATGACGTTGTACCATGCATCATTGCTGTAGACTTTTGGGCTCAAGTCAAGATGACCACACAAATAGTTGTGTGGTCCCAGTGATCTTGCCCACATTGTCTTCCCTGTCCTGCTATCACCCTGTATGACTATACTTACAGGTCTCCATGGCCGCGCAGCGGCATTGGCTATGTTTTCAGAGACCCATTCTTCAAGTTCTTCTGGAACTTGATTAAAAGAAGATGAAATAAAAGGAGAAACATAAATATCTATAGGAGGTGTAAAGATCCTATCTAAATTACTATTTAAATTATGAAACTGTAAAACATAATCTTTGGGAGCTTTCTCCCTTAATATATTGAGGGCCGAAACTTTGGACCCTGAGTTGATTGCCTCGGCATACGCGTCGTTTGCAGATTGGCAACCTCCTCTAGCTGATCGTCCATCGATCTGGAAAACTCCAGAATCAAGGATGTCTCCGTCTTTCTCCATGTAGGTTTTGACATCAGACGAGCTTTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTACTTGGGGATGTGAGATCGAAGAATCTATTATTTTTGCATTGGAATTTTCCTTCGAACTGGATGAGAACATGCAGGTGAGGATTCCCATCGTTGTGTAGTTCTCTGCAGATTCTGATGAATAATATATTAGTTGGGGTTTCTAGGGTTTGTAATTGTGAAAGTGCTTCTTCTTTTGTAAGTGAGCACTGTGGGTATGTTAGAAAATAATTTTTTGCATTTATTCTGAATTTAGTAGGTGGAGGCATGTTGACTTGGTCAATCGGTGTCTCTCAATCTTTGCTATGCAATCGGTGTCTGGGGTCTTATTTATATGAGACACCAAATGGCAATATTGTAATTTGGTAAAGTGGAGCGTATAACTTTAATTCAAACTCCAGAATGGTAAAGCGGCCATCCGTCTAATATT

Gene Information

NCBI Accession YP_665621.1
Location 128-484
Gene Name AV2
Protein Name precoat protein
Coding Region ATGAAAATGTGGGATCCTTTAATTAACGAATTCCCTGAGACCGTTCACGGTTTTAGATGTATGCTTGCAATAAAATATCTGCAAGCCGTTCAATTGACGTACTCCCCTGATACGGTAGGATACGATTTAATTCGTGAACTTATACGTATTTTACGTACTAAGGATTATGGCCAAGCGACCTGCAGATATAGTCATTTCCACTCCCGCCTCCAAGGTACGTCGGAGGTTGAACTTCGACAGCCCCTATCGCAGCAGTGCTGCTGCCCCAACTGTCCTTGTCACCAACAAAAGGAGGACATGGGTCAATCGGCCCATGTACAGAAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGA
Protein Sequence MKMWDPLINEFPETVHGFRCMLAIKYLQAVQLTYSPDTVGYDLIRELIRILRTKDYGQATCRYSHFHSRLQGTSEVELRQPLSQQCCCPNCPCHQQKEDMGQSAHVQKAQNVQDVQKP

NCBI Accession YP_665622.1
Location 294-1067
Gene Name AV1
Protein Name coat protein
Coding Region ATGGCCAAGCGACCTGCAGATATAGTCATTTCCACTCCCGCCTCCAAGGTACGTCGGAGGTTGAACTTCGACAGCCCCTATCGCAGCAGTGCTGCTGCCCCAACTGTCCTTGTCACCAACAAAAGGAGGACATGGGTCAATCGGCCCATGTACAGAAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGTTGTGAAGGTCCATGTAAGGTTCAGTCGTTTGAACAGCGTCACGATGTAGTCCATGTAGGTAAAGTAATATGCGTGTCTGATGTTACCCGTGGTAATGGGTTGACTCACCGTGTGGGTAAGAGGTTCTGTATTAAATCTGTATACGTTTTGGGTAAAATCTGGATGGATGAAAATATTAAGACCAAGAATCACACTAATACGGTCATGTTCTACCTAGTCCGTGATAGAAGACCCTTTGGTACTCCTCAGGATTTTGGACAAGTTTTTAACATGTATGATAATGAACCTAGTACTGCAACTGTGAAGAATGACAACAGAGATCGATTTCAAGTACTTAGAAGATTTCAGTCTACCGTTACTGGTGGCCAGTATGCATCTAAGGAGCAAGCCATAGTTAGGAAATTTATGAAGATTAACAACCACGTTACTTACAACCATCAGGAAGCTGCGAAGTACGATAACCATACAGAGAACGCCTTGTTATTGTATATGGCATGTACTCATGCCAGTAACCCTGTGTATGCTACTTTGAAAATCAGGATCTATTTTTACGATTCTGTTCAGAATTAA
Protein Sequence MAKRPADIVISTPASKVRRRLNFDSPYRSSAAAPTVLVTNKRRTWVNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSFEQRHDVVHVGKVICVSDVTRGNGLTHRVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQSTVTGGQYASKEQAIVRKFMKINNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN

NCBI Accession YP_665623.1
Location 1064-1468
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAGGCAAAGAATGGCGTGTATATCTGGACGGTGCCAAATCCCCTATATTTCAAGATAACAGATCACCTCAGCAGGCCATTCAACAAAGAACAAGACAAGATTACCGTCCAGATTCAATTCAACTACAACCTGAGAACTCAACTGGGAATTCACAAATGCTTTCTGATTTTCGAAGTCTGGACTCGCTTACAGCCTCAGACATGGCGTTTCTTGAGAGTATTTAAGAAGCAAGTCATGCAGTATTTAGATAATTTAGGTGTAATATCTATTAATAATGTAATTAGAGCAGTAGATCATGTATTATATAATAAACTACAACACACAATGTATGTACAGGAATTTCATGATATAAAATTCAATATTTATTAA
Protein Sequence MDSRTGELITAAQAKNGVYIWTVPNPLYFKITDHLSRPFNKEQDKITVQIQFNYNLRTQLGIHKCFLIFEVWTRLQPQTWRFLRVFKKQVMQYLDNLGVISINNVIRAVDHVLYNKLQHTMYVQEFHDIKFNIY

NCBI Accession YP_665624.1
Location 1209-1619
Gene Name AC2
Protein Name transcription activator protein
Coding Region ATGCAACCTTCATCACCCTCAACGAGCCACTCTACTCCAATACCAATCAAAGTCCAGCACAAGCTAGCCAAGAGGAAGAAAGTGACCAGGAGACGTAGGGTTGACCTAGACTGTGGTTGCACAATATACATAGGAATACACTGTGCCAACGATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAGGCAAAGAATGGCGTGTATATCTGGACGGTGCCAAATCCCCTATATTTCAAGATAACAGATCACCTCAGCAGGCCATTCAACAAAGAACAAGACAAGATTACCGTCCAGATTCAATTCAACTACAACCTGAGAACTCAACTGGGAATTCACAAATGCTTTCTGATTTTCGAAGTCTGGACTCGCTTACAGCCTCAGACATGGCGTTTCTTGAGAGTATTTAA
Protein Sequence MQPSSPSTSHSTPIPIKVQHKLAKRKKVTRRRRVDLDCGCTIYIGIHCANDGFTHRGTHHCSSGKEWRVYLDGAKSPIFQDNRSPQQAIQQRTRQDYRPDSIQLQPENSTGNSQMLSDFRSLDSLTASDMAFLESI

NCBI Accession YP_665625.1
Location 1522-2607
Gene Name AC1
Protein Name replication-associated protein
Coding Region ATGCCTCCACCTACTAAATTCAGAATAAATGCAAAAAATTATTTTCTAACATACCCACAGTGCTCACTTACAAAAGAAGAAGCACTTTCACAATTACAAACCCTAGAAACCCCAACTAATATATTATTCATCAGAATCTGCAGAGAACTACACAACGATGGGAATCCTCACCTGCATGTTCTCATCCAGTTCGAAGGAAAATTCCAATGCAAAAATAATAGATTCTTCGATCTCACATCCCCAAGTAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCGTCTGATGTCAAAACCTACATGGAGAAAGACGGAGACATCCTTGATTCTGGAGTTTTCCAGATCGATGGACGATCAGCTAGAGGAGGTTGCCAATCTGCAAACGACGCGTATGCCGAGGCAATCAACTCAGGGTCCAAAGTTTCGGCCCTCAATATATTAAGGGAGAAAGCTCCCAAAGATTATGTTTTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATCTTTACACCTCCTATAGATATTTATGTTTCTCCTTTTATTTCATCTTCTTTTAATCAAGTTCCAGAAGAACTTGAAGAATGGGTCTCTGAAAACATAGCCAATGCCGCTGCGCGGCCATGGAGACCTGTAAGTATAGTCATACAGGGTGATAGCAGGACAGGGAAGACAATGTGGGCAAGATCACTGGGACCACACAACTATTTGTGTGGTCATCTTGACTTGAGCCCAAAAGTCTACAGCAATGATGCATGGTACAACGTCATTGATGACGTAGACCCGCACTATCTAAAGCACTTTAAGGAATTCATGGGGGCCCAACGAGACTGGCAAAGCAACACAAAGTATGGGAAGCCAATTCAAATTAAAGGTGGAATCCCAACAATCTTCCTTTGCAATCCAGGACCAACTGCCTCCTATATAGAATATCTTGATGAAGAAAAGAATAGTGCATTAAAAGCCTGGGCAATAAAAAATGCAACCTTCATCACCCTCAACGAGCCACTCTACTCCAATACCAATCAAAGTCCAGCACAAGCTAGCCAAGAGGAAGAAAGTGACCAGGAGACGTAG
Protein Sequence MPPPTKFRINAKNYFLTYPQCSLTKEEALSQLQTLETPTNILFIRICRELHNDGNPHLHVLIQFEGKFQCKNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYMEKDGDILDSGVFQIDGRSARGGCQSANDAYAEAINSGSKVSALNILREKAPKDYVLQFHNLNSNLDRIFTPPIDIYVSPFISSSFNQVPEELEEWVSENIANAAARPWRPVSIVIQGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTASYIEYLDEEKNSALKAWAIKNATFITLNEPLYSNTNQSPAQASQEEESDQET

NCBI Accession YP_665626.1
Location 2157-2450
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAATCCTCACCTGCATGTTCTCATCCAGTTCGAAGGAAAATTCCAATGCAAAAATAATAGATTCTTCGATCTCACATCCCCAAGTAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCGTCTGATGTCAAAACCTACATGGAGAAAGACGGAGACATCCTTGATTCTGGAGTTTTCCAGATCGATGGACGATCAGCTAGAGGAGGTTGCCAATCTGCAAACGACGCGTATGCCGAGGCAATCAACTCAGGGTCCAAAGTTTCGGCCCTCAATATATTAA
Protein Sequence MGILTCMFSSSSKENSNAKIIDSSISHPQVGQHISIQTFRELKARLMSKPTWRKTETSLILEFSRSMDDQLEEVANLQTTRMPRQSTQGPKFRPSIY