Siegesbeckia yellow vein Guangxi virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000867585.1 |
| Isolate |
China:Guangxi Province |
| Release date |
2015/2/13 |
| Submitter |
Wu,J.B., Cai,J.H., Zhou,X.P. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCCGATTTTTTAAAGTGGGCCCCCTATGTTGGCTGATCTAGACCGTTGCTCAAAGCTAAATTAAAAAATATCCCCGTACGCTTTTGTATATTTAAATGTTTTCCCTCTTGATTTATATACGAAAATGTGGGATCCATTACTTAACGAATTCCCTGAAACCGTTCACGGGTTTAGATGTATGCTTGCAATTAAATATTTGCAAGTCGTTGAAGTTACTTACGCTCCTGATACGGTGGGATACGATTTAATTCGTGAACTTATACGTATTTTACGTACAAAGGATTATGGCCATGCGACCTGCAGCTGCAGATATAGTCATTTCCACTCCCGCCTCCAAAGTACGCCGGAGGTTGAACTTCGACAGCCCCTACCGCAGCAGTGCTGCTGCCCCAACTGTCCTAGTCACAAACAACCGCAGCAGACGGGGTTGGGCCCAAAGGCCCATGTATCGGAAGCCCAGAATTTATCGGATGTTCAGAACACCTGATGTTCCCAGAGGTTGTGAAGGCCCATGTAAAGTCCAATCTTATGAGAAGAAGAATGATGTCAATCATACTGGTACTTACTTATGTGTGTCAGATGTTACTCGTGGTAATGGATTAACTCATCGTACAGGCAAACGTTTTTGCATCAAGAATATATACATTATGGGGAAGATATGGATGGATGAGAATATCAAGACAAAGAACCATACTAATACTGTTATGTTTTGGTTAGTTAGAGATAGAAGACCTGTGACTACACCATATGGCTTTGGTGAAGCTTTTAACATGTATGACAATGAACCAAGTACTGCCACTATTAAGAATGATCTTAGAGATAGGTTGCAAGTTATTAGGAGGTTCACTTCTACTGTGACTGGTGGTCAGTACGCATCAAAGGAACAGGCGATTGTCAAGAAGTTCTATAAGATCTATCATCATGTGACGTACAATCATCAAGAACAAGCAAAGTATGAGAATCATACGGAGAATGCATTATTATTGTATATGGCATCAACACATGCCAGTAACCCTGTGTATGCGACTTTAAAGATCAGAATCTATTTCTATGATTCTGTTCAGAATTAATAAATATTGAATTTTATATCATGAAATTCCTTTACATACATTGTTTGCTGTAGTTTATTATATAATACATGATCTACAGCTCTAATTACATTGTTTATTGAAATCACTCCTAAATTATCTAAATACTGCATCACTTGTGTTTTAAATACTCTTAAGAAACGCCATGTCTGAGGATGTAAGCGAGTCCAGACTTCGAAAATCAGAAAGCATTTGTGAATCCCCAGCTGAGTTCTCAGGTTGTAGTTGAATTGTATCTGGATTGTAATCCTGTCTTGGTCTTTGTTGAATGGCCTGCTGAGGTGATCTGTTATCTTGAAATATAGGGGATTTGGAACCGTCCAGATATACACGCCACTCTGTGCCTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATTGTTTGCACAGTGTATTCCTATGTATACTGTGCAACCACAGTCCAGATCAATCCTCCGTCTCCTGGTCACCTTCTTCTTCTTGGCTATCTTGTGCTGGACTTTGATTGGTACCGGAGTAGAGTGGGCCGTTGAGGGTGATGAAGGTTGCATTTTTTATTGCCCAGGCTTTTAATGCACTATTCTTCTCTTCATCAAGATATTCTATATAGGATGCCGTTGGTCCTGGATTGCAGAGGAAGATTGTTGGGATTCCACCTTTAATTTGAATTGGTTTCCCATACTTGGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGCGGGTCTACGTCATCAATGACGTTATACCATGCGTCATTGCTGTAGACCTTTGGACTCAAGTCAAGATGACCACACAAGTAGTTGTGTGGCCCTAATGACCTTGCCCACATTGTCTTGCCTGTCCTGCTATCACCCTCTATGACTATACTTACAGGTCTCCATGGCCGCGCAGCGGCATCTGCTATGTTTTCAGAGACCCATTCCTCTAACTCATCTGGGACTTGATCAAAAGAAGAAGAAATAAAAGGAGAAACATAAACCTCCATTGGAGGTGTAAAAATCCTATCTAAATTACTATTTAAATTATGAAATTGTAAAACAAAATCTTTGGGAGCTTTCTCCCTTAATATATTGAGGGCCGAAGCTTTGGACCCTGAGTTGATTGCCTCGGCATATGCGTCGTTTGCAGATTGGCAACCTCCTCTAGCTGATCTTCCATCGACTTGGAAAACTCCATTATCAAGGATGTCTCCGTCTTTTTCCATATAGGTTTTGACGTCTGACGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGATCTGTTTGGGGAGGTAAGGTCGAAGAATCTGTTGTTCTGGCATTTGAACTTTCCTTCGAATTGGATGAGAATATGCAAGTGAGGAGTCCCATCTTCGTGTAGTTCCCTGCAGATTCTTACGAATAGTTTATTAGTTGGTGTTGATAGGGCTAATATTTGTGAAAGTGCTTCCTCTTTGGTGAGTGAGCAATGTGGGTATGTAAGGAAATAGTTTCTGGCATTTATTAGAAATTTCTTTGGTAGAGGCATGTTGACTTGGTCAATCGGGTCCTCTCAAACTTGTCTATGCAATCGGGGAATGGGTCCTTATTTATATGTGAGGACCTAATGGCATTATTGTAAATTTGGTAAAGCGGAGCGTGTAACTTTAATTCAAATTCCCAATTGGTAAAGCGGCCATCCGTTTAATATT
Gene Information
|
NCBI Accession
|
YP_729216.1
|
|
Location
|
136-498 |
|
Gene Name
|
AV2 |
|
Protein Name
|
AV2 protein |
|
Coding Region
|
ATGTGGGATCCATTACTTAACGAATTCCCTGAAACCGTTCACGGGTTTAGATGTATGCTTGCAATTAAATATTTGCAAGTCGTTGAAGTTACTTACGCTCCTGATACGGTGGGATACGATTTAATTCGTGAACTTATACGTATTTTACGTACAAAGGATTATGGCCATGCGACCTGCAGCTGCAGATATAGTCATTTCCACTCCCGCCTCCAAAGTACGCCGGAGGTTGAACTTCGACAGCCCCTACCGCAGCAGTGCTGCTGCCCCAACTGTCCTAGTCACAAACAACCGCAGCAGACGGGGTTGGGCCCAAAGGCCCATGTATCGGAAGCCCAGAATTTATCGGATGTTCAGAACACCTGA |
|
Protein Sequence
|
MWDPLLNEFPETVHGFRCMLAIKYLQVVEVTYAPDTVGYDLIRELIRILRTKDYGHATCSCRYSHFHSRLQSTPEVELRQPLPQQCCCPNCPSHKQPQQTGLGPKAHVSEAQNLSDVQNT |
|
NCBI Accession
|
YP_729217.1
|
|
Location
|
296-1081 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGGCCATGCGACCTGCAGCTGCAGATATAGTCATTTCCACTCCCGCCTCCAAAGTACGCCGGAGGTTGAACTTCGACAGCCCCTACCGCAGCAGTGCTGCTGCCCCAACTGTCCTAGTCACAAACAACCGCAGCAGACGGGGTTGGGCCCAAAGGCCCATGTATCGGAAGCCCAGAATTTATCGGATGTTCAGAACACCTGATGTTCCCAGAGGTTGTGAAGGCCCATGTAAAGTCCAATCTTATGAGAAGAAGAATGATGTCAATCATACTGGTACTTACTTATGTGTGTCAGATGTTACTCGTGGTAATGGATTAACTCATCGTACAGGCAAACGTTTTTGCATCAAGAATATATACATTATGGGGAAGATATGGATGGATGAGAATATCAAGACAAAGAACCATACTAATACTGTTATGTTTTGGTTAGTTAGAGATAGAAGACCTGTGACTACACCATATGGCTTTGGTGAAGCTTTTAACATGTATGACAATGAACCAAGTACTGCCACTATTAAGAATGATCTTAGAGATAGGTTGCAAGTTATTAGGAGGTTCACTTCTACTGTGACTGGTGGTCAGTACGCATCAAAGGAACAGGCGATTGTCAAGAAGTTCTATAAGATCTATCATCATGTGACGTACAATCATCAAGAACAAGCAAAGTATGAGAATCATACGGAGAATGCATTATTATTGTATATGGCATCAACACATGCCAGTAACCCTGTGTATGCGACTTTAAAGATCAGAATCTATTTCTATGATTCTGTTCAGAATTAA |
|
Protein Sequence
|
MAMRPAAADIVISTPASKVRRRLNFDSPYRSSAAAPTVLVTNNRSRRGWAQRPMYRKPRIYRMFRTPDVPRGCEGPCKVQSYEKKNDVNHTGTYLCVSDVTRGNGLTHRTGKRFCIKNIYIMGKIWMDENIKTKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNEPSTATIKNDLRDRLQVIRRFTSTVTGGQYASKEQAIVKKFYKIYHHVTYNHQEQAKYENHTENALLLYMASTHASNPVYATLKIRIYFYDSVQN |
|
NCBI Accession
|
YP_729218.1
|
|
Location
|
1078-1482 |
|
Gene Name
|
AC3 |
|
Protein Name
|
AC3 protein |
|
Coding Region
|
ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAGGCACAGAGTGGCGTGTATATCTGGACGGTTCCAAATCCCCTATATTTCAAGATAACAGATCACCTCAGCAGGCCATTCAACAAAGACCAAGACAGGATTACAATCCAGATACAATTCAACTACAACCTGAGAACTCAGCTGGGGATTCACAAATGCTTTCTGATTTTCGAAGTCTGGACTCGCTTACATCCTCAGACATGGCGTTTCTTAAGAGTATTTAAAACACAAGTGATGCAGTATTTAGATAATTTAGGAGTGATTTCAATAAACAATGTAATTAGAGCTGTAGATCATGTATTATATAATAAACTACAGCAAACAATGTATGTAAAGGAATTTCATGATATAAAATTCAATATTTATTAA |
|
Protein Sequence
|
MDSRTGELITAAQAQSGVYIWTVPNPLYFKITDHLSRPFNKDQDRITIQIQFNYNLRTQLGIHKCFLIFEVWTRLHPQTWRFLRVFKTQVMQYLDNLGVISINNVIRAVDHVLYNKLQQTMYVKEFHDIKFNIY |
|
NCBI Accession
|
YP_729219.1
|
|
Location
|
1223-1633 |
|
Gene Name
|
AC2 |
|
Protein Name
|
AC2 protein |
|
Coding Region
|
ATGCAACCTTCATCACCCTCAACGGCCCACTCTACTCCGGTACCAATCAAAGTCCAGCACAAGATAGCCAAGAAGAAGAAGGTGACCAGGAGACGGAGGATTGATCTGGACTGTGGTTGCACAGTATACATAGGAATACACTGTGCAAACAATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAGGCACAGAGTGGCGTGTATATCTGGACGGTTCCAAATCCCCTATATTTCAAGATAACAGATCACCTCAGCAGGCCATTCAACAAAGACCAAGACAGGATTACAATCCAGATACAATTCAACTACAACCTGAGAACTCAGCTGGGGATTCACAAATGCTTTCTGATTTTCGAAGTCTGGACTCGCTTACATCCTCAGACATGGCGTTTCTTAAGAGTATTTAA |
|
Protein Sequence
|
MQPSSPSTAHSTPVPIKVQHKIAKKKKVTRRRRIDLDCGCTVYIGIHCANNGFTHRGTHHCSSGTEWRVYLDGSKSPIFQDNRSPQQAIQQRPRQDYNPDTIQLQPENSAGDSQMLSDFRSLDSLTSSDMAFLKSI |
|
NCBI Accession
|
YP_729220.1
|
|
Location
|
1530-2621 |
|
Gene Name
|
AC1 |
|
Protein Name
|
AC1 protein |
|
Coding Region
|
ATGCCTCTACCAAAGAAATTTCTAATAAATGCCAGAAACTATTTCCTTACATACCCACATTGCTCACTCACCAAAGAGGAAGCACTTTCACAAATATTAGCCCTATCAACACCAACTAATAAACTATTCGTAAGAATCTGCAGGGAACTACACGAAGATGGGACTCCTCACTTGCATATTCTCATCCAATTCGAAGGAAAGTTCAAATGCCAGAACAACAGATTCTTCGACCTTACCTCCCCAAACAGATCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCGTCAGACGTCAAAACCTATATGGAAAAAGACGGAGACATCCTTGATAATGGAGTTTTCCAAGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCAAACGACGCATATGCCGAGGCAATCAACTCAGGGTCCAAAGCTTCGGCCCTCAATATATTAAGGGAGAAAGCTCCCAAAGATTTTGTTTTACAATTTCATAATTTAAATAGTAATTTAGATAGGATTTTTACACCTCCAATGGAGGTTTATGTTTCTCCTTTTATTTCTTCTTCTTTTGATCAAGTCCCAGATGAGTTAGAGGAATGGGTCTCTGAAAACATAGCAGATGCCGCTGCGCGGCCATGGAGACCTGTAAGTATAGTCATAGAGGGTGATAGCAGGACAGGCAAGACAATGTGGGCAAGGTCATTAGGGCCACACAACTACTTGTGTGGTCATCTTGACTTGAGTCCAAAGGTCTACAGCAATGACGCATGGTATAACGTCATTGATGACGTAGACCCGCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACCAAGTATGGGAAACCAATTCAAATTAAAGGTGGAATCCCAACAATCTTCCTCTGCAATCCAGGACCAACGGCATCCTATATAGAATATCTTGATGAAGAGAAGAATAGTGCATTAAAAGCCTGGGCAATAAAAAATGCAACCTTCATCACCCTCAACGGCCCACTCTACTCCGGTACCAATCAAAGTCCAGCACAAGATAGCCAAGAAGAAGAAGGTGACCAGGAGACGGAGGATTGA |
|
Protein Sequence
|
MPLPKKFLINARNYFLTYPHCSLTKEEALSQILALSTPTNKLFVRICRELHEDGTPHLHILIQFEGKFKCQNNRFFDLTSPNRSAHFHPNIQGAKSSSDVKTYMEKDGDILDNGVFQVDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFHNLNSNLDRIFTPPMEVYVSPFISSSFDQVPDELEEWVSENIADAAARPWRPVSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTASYIEYLDEEKNSALKAWAIKNATFITLNGPLYSGTNQSPAQDSQEEEGDQETED |
|
NCBI Accession
|
YP_729221.1
|
|
Location
|
2171-2464 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 protein |
|
Coding Region
|
ATGGGACTCCTCACTTGCATATTCTCATCCAATTCGAAGGAAAGTTCAAATGCCAGAACAACAGATTCTTCGACCTTACCTCCCCAAACAGATCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCGTCAGACGTCAAAACCTATATGGAAAAAGACGGAGACATCCTTGATAATGGAGTTTTCCAAGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCAAACGACGCATATGCCGAGGCAATCAACTCAGGGTCCAAAGCTTCGGCCCTCAATATATTAA |
|
Protein Sequence
|
MGLLTCIFSSNSKESSNARTTDSSTLPPQTDQHISIRTFRELKARQTSKPIWKKTETSLIMEFSKSMEDQLEEVANLQTTHMPRQSTQGPKLRPSIY |