Bean latent virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_018587735.1
Isolate Mexico: Ruiz, Nayarit
Release date 2021/6/1
Submitter Martinez-Marrero,N., Avalos-Calleros,J.A., Chiquito-Almanza,E., Acosta-Gallegos,J.A., Ambriz-Granados,S., Arguello-Astorga,G.R., Anaya-Lopez,J.L.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055589
ACCGGATGGCCGCGCGATTTTTTTTATCCCTTGATCCTACGGTCGCCCGCAATTCGCGCTTGGTCCATGTGAATGTGATAAAAAGTGACCAATCATGTTTCGTTTGACGAGTCTAATTATTGTTTCTTCGTCCCCACGTGATGGACCAAGTGCTTTATATATTTGAATTAAATGCTTATCCTCTTTAATTCAAAATGCCTAAGCGCGATGCCCCGTGGCGCACAATGGCGGGGACCTCCAAGGTCAGCCGCTCCGCGAATTATTCGCCTCGTGGAGGTATGGGTCCAAAGATGGACAAGGCCTCTGCTTGGGTTAACAGGCCCATGTATAGGAAGCCCAGGATATATCGGGTCCAAAGAGGACCTGACGTCCCTAGAGGCTGTGAAGGGCCTTGTAAGGTCCAGTCATTTGAACAGCGTCATGATATTTCTCATGTTGGTAAGGTCATTTGTATATCTGATGTCACACGTGGTAACGGTATTACTCATCGTGTGGGAAAACGTTTTTGTGTTAAGTCTGTGTATATTTTAGGTAAGATATGGATGGACGAGAATATTAAATTGAAGAACCACACGAACAGCGTCATGTTCTGGTTGGTCAGAGACAGAAGACCATATGGCACGCCTATGGATTTTGGTCAAGTCTTTAACATGTATGACAATGAGCCCAGTACTGCCACTGTCAAGAACGATCTTCGTGATCGTTTTCAAGTTTTACACAGGTTCTATGCGAAGGTGACTGGTGGTCAGTATGCTAGCAACGAGCAGGCTATTGTTAGGCGATTTTGGAAGGTGAATAATCATGTCGTGTACAATCATCAAGAAGCAGCCAAGTACGAGAATCACACGGAGAATGCGTTACTATTGTATATGGCATGTACGCATGCCTCCAATCCTGTATATGCTACGTTGAAAATACGTAGTTATTTCTATGACTCGATTTCCAATTAATAAATGTTAAATTTTATTGAATGATCTTCTATTACATGAGTTACATATGGTCTGTCTGTTGCGAAAGCAACAGCTCGAATTACATTATTAATTGAAATAACGCCCAAATTGTCTAAGTACAACATGACTAAATGCCTAAATCTATTTAAGTAAGTCGTTCCAGAAACTCGAATCAATGTCGTCCAGACTTGGAAATTTAGATACGCTTTGTGTAGATCCAGAGCCCTCCTCAGGTTGTGGTTGAACCTTATCTGGATGTGGAATATCCTCGTCAAGGAGAACGGTGGATCCTCTACTCTTGTTATCTTGAAATAAAGGGGATTTGGCACCTCCCAGATAAAAACGCCACTCTCTGCTTGATGCGCAGTGATGGGTTCCCCTGTGAGTGAATCCATGATTGAAGCAGTTGATGTGTAGGAAGATCGAACAGCCGCACTCCAAGTCGATTCTTCTACGTCGGACTGCCCTGCGTTTTGCAAACCGGTGCTGAGGTTTGATAGAGGGGGGAGTTGAGGAAGATGAATTTCGCATTATGAAGCGTCCACGCTTTTAGATGTGCATTCTCTTGTCTATCCAAGTAGTCTTTATAACTCGCCCCCTCTCCTGGATTGCAAAGCACAATTGATGGGATACCACCTTTAATTTGAACTGGCTTTCCGTACTTGCAATTTGTTTGCCAATTCTTTTGGGCCCCGATAAGCTCTTTCCAGTGCTTCATCTTTAAGTATTGTGGAGCGACGTCATCAATGACGTTGTAATCTACATTATTTGAATAGACAAAAGAATTGAAATCCAGGTGTCCACTCAAGTAATTATGAGAACCTAATGAACGTGCCCACATTGTTTTTCCAGTTCTTGAATCACCTTCAATGATGATACTAATAGGTCTCTCTGTCCGCGCAGCGGCACCCCTTCCGAAATAATCGTCAGCCCATTGTTGCATATCCAGTGGAACGTTGTTGAACGACGATTGTGGAAATGGAGGAACCCATGGTTCCGGGGGTTTTTGGAATATCCTTGTTGCGTTTGAGACCAGATTATGATATTGAAGGAAGAAATGTTGAGGTTGTTCTTCCTTGATTATCTGCAGAGCCGCTTCTGCAGAACCTGCATTTAATGCCTTCGCGTATGTGTCGTTAGCAGATTGCTGACCTCCTCTAGCAGATCTGCCGTCGATTTGGAACTCTCCCCATTCAATTGTATCTCCATCCTTGTCGATGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGCTGACCTGGTTGTGGAGACCAGGTCGAAGAATCTGTTATTTGAACATTGGTATTTCCCTTCGAACTGGATAAGCACGTGTAGATGAGGTTGCCCATCTTCATGTGTTTCTCTGCATATCTTGATAAACTTCTTGTTAACTGGAGTTGTTAGACGTTGTAATTGTGATAATGCCTCTTCTTTGGATATGGAACACTGAGGATATGTGAGGAAGTAGTTCTTGGCATTTAAGCGAAAGCGTTTCGGGAGTGGCATATTTGTAATAAGAGGGGTGTACACCGATTGAGGCTCTCTCAAAACTGTCATAATGAATCGGTGTATGGTGTACAATTTATACTAGAACCCTCAATCTCAATTTCTGCACACGTGGCGGCCATCCGATATAATATT

Gene Information

NCBI Accession YP_010087810.1
Location 172-531
Protein Name hypothetical protein
Coding Region ATGCTTATCCTCTTTAATTCAAAATGCCTAAGCGCGATGCCCCGTGGCGCACAATGGCGGGGACCTCCAAGGTCAGCCGCTCCGCGAATTATTCGCCTCGTGGAGGTATGGGTCCAAAGATGGACAAGGCCTCTGCTTGGGTTAACAGGCCCATGTATAGGAAGCCCAGGATATATCGGGTCCAAAGAGGACCTGACGTCCCTAGAGGCTGTGAAGGGCCTTGTAAGGTCCAGTCATTTGAACAGCGTCATGATATTTCTCATGTTGGTAAGGTCATTTGTATATCTGATGTCACACGTGGTAACGGTATTACTCATCGTGTGGGAAAACGTTTTTGTGTTAAGTCTGTGTATATTTTAG
Protein Sequence MLILFNSKCLSAMPRGAQWRGPPRSAAPRIIRLVEVWVQRWTRPLLGLTGPCIGSPGYIGSKEDLTSLEAVKGLVRSSHLNSVMIFLMLVRSFVYLMSHVVTVLLIVWENVFVLSLCIF

NCBI Accession YP_010087811.1
Location 195-950
Gene Name AV1
Protein Name coat protein
Coding Region ATGCCTAAGCGCGATGCCCCGTGGCGCACAATGGCGGGGACCTCCAAGGTCAGCCGCTCCGCGAATTATTCGCCTCGTGGAGGTATGGGTCCAAAGATGGACAAGGCCTCTGCTTGGGTTAACAGGCCCATGTATAGGAAGCCCAGGATATATCGGGTCCAAAGAGGACCTGACGTCCCTAGAGGCTGTGAAGGGCCTTGTAAGGTCCAGTCATTTGAACAGCGTCATGATATTTCTCATGTTGGTAAGGTCATTTGTATATCTGATGTCACACGTGGTAACGGTATTACTCATCGTGTGGGAAAACGTTTTTGTGTTAAGTCTGTGTATATTTTAGGTAAGATATGGATGGACGAGAATATTAAATTGAAGAACCACACGAACAGCGTCATGTTCTGGTTGGTCAGAGACAGAAGACCATATGGCACGCCTATGGATTTTGGTCAAGTCTTTAACATGTATGACAATGAGCCCAGTACTGCCACTGTCAAGAACGATCTTCGTGATCGTTTTCAAGTTTTACACAGGTTCTATGCGAAGGTGACTGGTGGTCAGTATGCTAGCAACGAGCAGGCTATTGTTAGGCGATTTTGGAAGGTGAATAATCATGTCGTGTACAATCATCAAGAAGCAGCCAAGTACGAGAATCACACGGAGAATGCGTTACTATTGTATATGGCATGTACGCATGCCTCCAATCCTGTATATGCTACGTTGAAAATACGTAGTTATTTCTATGACTCGATTTCCAATTAA
Protein Sequence MPKRDAPWRTMAGTSKVSRSANYSPRGGMGPKMDKASAWVNRPMYRKPRIYRVQRGPDVPRGCEGPCKVQSFEQRHDISHVGKVICISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDRFQVLHRFYAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRSYFYDSISN

NCBI Accession YP_010087812.1
Location 947-1345
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTCACTCACAGGGGAACCCATCACTGCGCATCAAGCAGAGAGTGGCGTTTTTATCTGGGAGGTGCCAAATCCCCTTTATTTCAAGATAACAAGAGTAGAGGATCCACCGTTCTCCTTGACGAGGATATTCCACATCCAGATAAGGTTCAACCACAACCTGAGGAGGGCTCTGGATCTACACAAAGCGTATCTAAATTTCCAAGTCTGGACGACATTGATTCGAGTTTCTGGAACGACTTACTTAAATAGATTTAGGCATTTAGTCATGTTGTACTTAGACAATTTGGGCGTTATTTCAATTAATAATGTAATTCGAGCTGTTGCTTTCGCAACAGACAGACCATATGTAACTCATGTAATAGAAGATCATTCAATAAAATTTAACATTTATTAA
Protein Sequence MDSLTGEPITAHQAESGVFIWEVPNPLYFKITRVEDPPFSLTRIFHIQIRFNHNLRRALDLHKAYLNFQVWTTLIRVSGTTYLNRFRHLVMLYLDNLGVISINNVIRAVAFATDRPYVTHVIEDHSIKFNIY

NCBI Accession YP_010087813.1
Location 1092-1481
Gene Name AC2
Protein Name transcriptional activator protein
Coding Region ATGCGAAATTCATCTTCCTCAACTCCCCCCTCTATCAAACCTCAGCACCGGTTTGCAAAACGCAGGGCAGTCCGACGTAGAAGAATCGACTTGGAGTGCGGCTGTTCGATCTTCCTACACATCAACTGCTTCAATCATGGATTCACTCACAGGGGAACCCATCACTGCGCATCAAGCAGAGAGTGGCGTTTTTATCTGGGAGGTGCCAAATCCCCTTTATTTCAAGATAACAAGAGTAGAGGATCCACCGTTCTCCTTGACGAGGATATTCCACATCCAGATAAGGTTCAACCACAACCTGAGGAGGGCTCTGGATCTACACAAAGCGTATCTAAATTTCCAAGTCTGGACGACATTGATTCGAGTTTCTGGAACGACTTACTTAAATAG
Protein Sequence MRNSSSSTPPSIKPQHRFAKRRAVRRRRIDLECGCSIFLHINCFNHGFTHRGTHHCASSREWRFYLGGAKSPLFQDNKSRGSTVLLDEDIPHPDKVQPQPEEGSGSTQSVSKFPSLDDIDSSFWNDLLK

NCBI Accession YP_010087814.1
Location 1402-2478
Gene Name AC1
Protein Name replication-associated protein
Coding Region ATGCCACTCCCGAAACGCTTTCGCTTAAATGCCAAGAACTACTTCCTCACATATCCTCAGTGTTCCATATCCAAAGAAGAGGCATTATCACAATTACAACGTCTAACAACTCCAGTTAACAAGAAGTTTATCAAGATATGCAGAGAAACACATGAAGATGGGCAACCTCATCTACACGTGCTTATCCAGTTCGAAGGGAAATACCAATGTTCAAATAACAGATTCTTCGACCTGGTCTCCACAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCGACAAGGATGGAGATACAATTGAATGGGGAGAGTTCCAAATCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCTAACGACACATACGCGAAGGCATTAAATGCAGGTTCTGCAGAAGCGGCTCTGCAGATAATCAAGGAAGAACAACCTCAACATTTCTTCCTTCAATATCATAATCTGGTCTCAAACGCAACAAGGATATTCCAAAAACCCCCGGAACCATGGGTTCCTCCATTTCCACAATCGTCGTTCAACAACGTTCCACTGGATATGCAACAATGGGCTGACGATTATTTCGGAAGGGGTGCCGCTGCGCGGACAGAGAGACCTATTAGTATCATCATTGAAGGTGATTCAAGAACTGGAAAAACAATGTGGGCACGTTCATTAGGTTCTCATAATTACTTGAGTGGACACCTGGATTTCAATTCTTTTGTCTATTCAAATAATGTAGATTACAACGTCATTGATGACGTCGCTCCACAATACTTAAAGATGAAGCACTGGAAAGAGCTTATCGGGGCCCAAAAGAATTGGCAAACAAATTGCAAGTACGGAAAGCCAGTTCAAATTAAAGGTGGTATCCCATCAATTGTGCTTTGCAATCCAGGAGAGGGGGCGAGTTATAAAGACTACTTGGATAGACAAGAGAATGCACATCTAAAAGCGTGGACGCTTCATAATGCGAAATTCATCTTCCTCAACTCCCCCCTCTATCAAACCTCAGCACCGGTTTGCAAAACGCAGGGCAGTCCGACGTAG
Protein Sequence MPLPKRFRLNAKNYFLTYPQCSISKEEALSQLQRLTTPVNKKFIKICRETHEDGQPHLHVLIQFEGKYQCSNNRFFDLVSTTRSAHFHPNIQGAKSSSDVKSYIDKDGDTIEWGEFQIDGRSARGGQQSANDTYAKALNAGSAEAALQIIKEEQPQHFFLQYHNLVSNATRIFQKPPEPWVPPFPQSSFNNVPLDMQQWADDYFGRGAAARTERPISIIIEGDSRTGKTMWARSLGSHNYLSGHLDFNSFVYSNNVDYNVIDDVAPQYLKMKHWKELIGAQKNWQTNCKYGKPVQIKGGIPSIVLCNPGEGASYKDYLDRQENAHLKAWTLHNAKFIFLNSPLYQTSAPVCKTQGSPT

NCBI Accession YP_010087815.1
Location 2064-2327
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGAAGATGGGCAACCTCATCTACACGTGCTTATCCAGTTCGAAGGGAAATACCAATGTTCAAATAACAGATTCTTCGACCTGGTCTCCACAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCGACAAGGATGGAGATACAATTGAATGGGGAGAGTTCCAAATCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCTAACGACACATACGCGAAGGCATTAA
Protein Sequence MKMGNLIYTCLSSSKGNTNVQITDSSTWSPQPGQHISIRTYRELNPAPMSSPTSTRMEIQLNGESSKSTADLLEEVSNLLTTHTRRH